Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0003255 Lotus japonicus HOM05D008094 ORTHO05D010082 8.6e-70 267.3 184 100.0
Psat1g222640 Pisum sativum HOM05D008094 ORTHO05D010082 6.9e-19 98.2 134 51.5
TPR.G2107 Trifolium pratense HOM05D008094 ORTHO05D010082 1.3e-17 94.0 131 48.9
Rhsim05G0113700 Rhododendron simsii HOM05D008094 ORTHO05D010082 1.9e-16 90.1 149 45.6
TAR628G1718 Trochodendron aralioides HOM05D008094 ORTHO05D010082 4.2e-16 89.0 137 51.1
QL02p100749 Quercus lobata HOM05D008094 ORTHO05D010082 6.1e-15 85.1 138 46.4
Dinv29599 Davidia involucrata HOM05D008094 ORTHO05D010082 1.0e-14 84.3 140 47.9
Medtr2g005710 Medicago truncatula HOM05D008094 ORTHO05D010082 1.4e-14 84.0 189 41.8
Nn3g18571 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.4e-14 84.0 138 47.8
Lalb_Chr15g0090761 Lupinus albus HOM05D008094 ORTHO05D010082 2.3e-14 83.2 136 44.9
Aqoxy5G01193 Aquilegia oxysepala HOM05D008094 ORTHO05D010082 1.1e-13 80.9 138 44.9
Cfa004482 Carpinus fangiana HOM05D008094 ORTHO05D010082 1.3e-12 77.4 130 45.4
Nn1g09196 Nelumbo nucifera HOM05D008094 ORTHO05D010082 8.2e-12 74.7 141 41.8
Gohir.D01G175400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 1.4e-11 73.9 130 42.3
Gorai.002G217700 Gossypium raimondii HOM05D008094 ORTHO05D010082 1.4e-11 73.9 127 43.3
Hma1.2p1_0633F.1_g192710 Hydrangea macrophylla HOM05D008094 ORTHO05D010082 1.4e-11 73.9 146 41.8
Manes.10G117000 Manihot esculenta HOM05D008094 ORTHO05D010082 2.4e-11 73.2 136 42.6
Prupe.1G579700 Prunus persica HOM05D008094 ORTHO05D010082 2.4e-11 73.2 140 42.1
DCAR_029178 Daucus carota HOM05D008094 ORTHO05D010082 5.3e-11 72.0 139 43.2
Gohir.A01G184400 Gossypium hirsutum HOM05D008094 ORTHO05D010082 5.3e-11 72.0 127 41.7
CsaV3_3G006440 Cucumis sativus L. HOM05D008094 ORTHO05D010082 9.1e-11 71.2 132 41.7
Potri.003G006100 Populus trichocarpa HOM05D008094 ORTHO05D010082 9.1e-11 71.2 129 41.9
Nn3g19209 Nelumbo nucifera HOM05D008094 ORTHO05D010082 1.2e-10 70.9 139 42.4
Eucgr.I02770 Eucalyptus grandis HOM05D008094 ORTHO05D010082 1.6e-10 70.5 139 43.2
MBI03_g07689_MAGBIO Magnolia biondii HOM05D008094 ORTHO05D010082 2.0e-10 70.1 134 41.8
CiPaw.06G174300 Carya illinoinensis HOM05D008094 ORTHO05D010082 4.5e-10 68.9 135 45.9
Potri.004G224600 Populus trichocarpa HOM05D008094 ORTHO05D010082 4.5e-10 68.9 139 38.8
arahy.Tifrunner.gnm1.ann1.8474VB Arachis hypogaea HOM05D008094 ORTHO05D010082 1.3e-09 67.4 55 69.1
arahy.Tifrunner.gnm1.ann1.V5JGY8 Arachis hypogaea HOM05D008094 ORTHO05D010082 1.3e-09 67.4 55 69.1
MELO3C016497.2 Cucumis melo HOM05D008094 ORTHO05D010082 1.3e-09 67.4 127 40.9
arahy.Tifrunner.gnm1.ann1.4TXG74 Arachis hypogaea HOM05D008094 ORTHO05D010082 5.0e-09 65.5 55 67.3
Ca_00034_v3 Cicer arietinum L. HOM05D008094 ORTHO05D010082 5.0e-09 65.5 80 52.5
COL.COLO4_17715 Corchorus olitorius HOM05D008094 ORTHO05D010082 6.5e-09 65.1 146 39.7
Glyma.16G002700 Glycine max HOM05D008094 ORTHO05D010082 8.5e-09 64.7 118 40.7
Nitab4.5_0000787g0100 Nicotiana tabacum HOM05D008094 ORTHO05D010082 1.9e-08 63.5 161 41.6
Thecc.02G017400 Theobroma cacao HOM05D008094 ORTHO05D010082 4.2e-08 62.4 134 41.8
Nitab4.5_0006171g0010 Nicotiana tabacum HOM05D008094 ORTHO05D010082 5.5e-08 62.0 156 37.2
ClCG10G007120 Citrullus lanatus HOM05D008094 ORTHO05D010082 9.4e-08 61.2 140 37.9
Duzib132G1075 Durio zibethinus HOM05D008094 ORTHO05D010082 2.7e-07 59.7 135 38.5
DCAR_001747 Daucus carota HOM05D008094 ORTHO05D010082 3.6e-07 59.3 149 39.6
Glyma.12G166400 Glycine max HOM05D008094 ORTHO05D010082 6.1e-07 58.5 122 36.9
Cpa.g.sc113.38 Carica papaya HOM05D008094 ORTHO05D010082 1.0e-06 57.8 181 47.5
Gohir.A03G215550 Gossypium hirsutum HOM05D008094 ORTHO05D010082 2.3e-06 56.6 80 47.5
Sopen01g045830 Solanum pennellii HOM05D008094 ORTHO05D010082 8.8e-06 54.7 156 35.3


User provided reference genes

Program Settings