Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 1.1e-267 926.0 464 100.0
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 1.7e-223 779.2 462 81.6
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 3.2e-222 775.0 461 81.8
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 3.6e-221 771.5 477 79.9
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 1.0e-220 770.0 461 81.8
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.5e-219 766.1 461 80.9
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 1.2e-216 756.5 463 79.5
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 1.2e-216 756.5 463 79.5
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.0e-215 753.4 464 80.4
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 3.2e-214 748.4 461 78.7
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 3.0e-196 688.7 459 72.3
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 6.8e-196 687.6 456 74.6
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 1.2e-195 686.8 399 84.7
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 4.1e-193 678.3 456 72.4
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 2.7e-192 675.6 456 71.9
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 2.5e-190 669.1 461 71.6
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 2.0e-187 659.4 455 69.9
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 5.7e-187 657.9 457 70.0
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 2.2e-186 656.0 459 70.2
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 4.9e-186 654.8 455 71.2
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 8.3e-186 654.1 452 70.8
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 5.4e-185 651.4 456 70.0
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 9.1e-185 650.6 461 68.8
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 3.5e-184 648.7 459 69.5
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 3.5e-184 648.7 455 69.7
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 5.9e-184 647.9 457 69.6
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.1e-182 643.7 462 69.7
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 1.5e-182 643.3 461 69.0
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.3e-182 642.1 450 69.3
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 3.3e-182 642.1 505 64.8
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 1.2e-181 640.2 459 69.3
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.2e-181 640.2 450 69.3
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 2.1e-181 639.4 459 69.7
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 6.8e-180 634.4 532 62.2
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 1.5e-179 633.3 460 68.9
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 4.4e-179 631.7 450 70.7
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 5.4e-177 624.8 451 70.3
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 1.2e-176 623.6 462 67.5
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 1.2e-176 623.6 452 68.6
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.1e-174 617.1 462 67.1
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 1.9e-174 616.3 553 58.4
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 4.3e-174 615.1 463 66.7
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 6.2e-173 611.3 463 66.7
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 1.4e-172 610.1 456 64.7
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 1.8e-172 609.8 459 66.0
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 5.2e-172 608.2 457 64.6
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 9.8e-171 604.0 456 64.3
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 9.8e-171 604.0 451 67.8
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 3.2e-169 599.0 454 65.2
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 5.4e-169 598.2 455 64.4
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 7.0e-169 597.8 452 64.2
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 3.5e-168 595.5 445 65.6
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 3.3e-166 589.0 459 63.4
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 4.7e-165 585.1 452 64.2
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 8.1e-165 584.3 450 63.6
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 1.8e-164 583.2 472 61.4
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 4.0e-164 582.0 445 64.9
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 6.8e-164 581.3 461 62.5
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 1.5e-163 580.1 451 62.1
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 2.0e-163 579.7 452 63.1
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 2.0e-163 579.7 452 63.1
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 2.0e-163 579.7 453 63.1
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 2.6e-163 579.3 451 62.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.9e-162 575.9 451 62.5
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 3.7e-162 575.5 450 61.8
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 3.7e-162 575.5 464 60.8
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 4.9e-162 575.1 451 62.5
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 6.4e-162 574.7 451 62.3
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 1.3e-159 567.0 452 61.3
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 2.3e-159 566.2 448 61.6
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 3.0e-159 565.8 424 66.0
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 4.3e-158 562.0 424 64.4
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 9.5e-158 560.8 427 62.8
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 6.2e-157 558.1 454 62.1
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 2.3e-156 556.2 452 60.4
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 4.0e-156 555.4 434 66.4
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 4.0e-156 555.4 396 69.4
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 5.2e-156 555.1 452 60.0
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 5.2e-156 555.1 452 60.0
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 2.0e-155 553.1 452 59.7
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 3.4e-155 552.4 452 59.3
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 4.4e-155 552.0 461 58.1
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 2.2e-154 549.7 455 57.4
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 3.5e-152 542.3 430 64.4
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 8.6e-151 537.7 472 56.1
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 2.8e-149 532.7 311 85.2
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 1.4e-145 520.4 471 59.0
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.6e-144 516.9 392 64.8
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 3.9e-143 512.3 389 64.0
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 5.1e-143 511.9 464 56.0
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 2.4e-140 503.1 392 64.8
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 3.3e-134 482.6 451 56.5
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 2.0e-131 473.4 395 60.5
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 1.0e-127 461.1 472 55.3
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.9e-118 430.3 333 65.5
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 5.9e-115 418.7 309 64.7
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 7.2e-113 411.8 310 65.8
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 8.2e-109 398.3 399 49.1
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.7e-98 364.0 317 56.8
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.1e-89 334.7 256 65.2
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 1.1e-89 334.7 256 65.2
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 3.0e-87 326.6 455 41.5
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 5.4e-68 262.7 354 41.0
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 1.1e-65 255.0 205 64.9
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 1.1e-65 255.0 183 69.9
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 9.5e-65 251.9 215 59.5
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 1.2e-40 171.8 114 73.7
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 7.3e-25 119.4 93 61.3
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.6e-16 90.5 74 59.5
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 1.4e-15 88.6 74 58.1
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 4.2e-12 77.0 80 48.8
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 6.2e-08 63.2 38 78.9


User provided reference genes

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