Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0002564 Lotus japonicus HOM05D000003 ORTHO05D000007 3.6e-163 578.2 292 100.0
Lj6g0003171 Lotus japonicus HOM05D000003 ORTHO05D000007 1.9e-50 203.8 316 44.6
Lj6g0020901 Lotus japonicus HOM05D000003 ORTHO05D000007 4.3e-47 192.6 201 51.2
Lj1g0012109 Lotus japonicus HOM05D000003 ORTHO05D000007 2.8e-46 189.9 245 46.1
Lj4g0008475 Lotus japonicus HOM05D000003 ORTHO05D000007 2.8e-46 189.9 247 45.3
Lj2g0002638 Lotus japonicus HOM05D000003 ORTHO05D000007 1.4e-45 187.6 270 43.7
Lj3g0003882 Lotus japonicus HOM05D000003 ORTHO05D000007 1.1e-42 177.9 226 46.0
Lj3g0003480 Lotus japonicus HOM05D000003 ORTHO05D000007 3.2e-42 176.4 214 50.5
Lj2g0012063 Lotus japonicus HOM05D000003 ORTHO05D000007 4.2e-42 176.0 182 52.2
Lj2g0006651 Lotus japonicus HOM05D000003 ORTHO05D000007 7.3e-39 165.2 156 57.1
Lj2g0018026 Lotus japonicus HOM05D000003 ORTHO05D000007 2.6e-28 130.2 290 35.5
Lj2g0027528 Lotus japonicus HOM05D000003 ORTHO05D000007 2.6e-28 130.2 290 35.5
Lj3g0024062 Lotus japonicus HOM05D000003 ORTHO05D000007 3.4e-28 129.8 296 35.8
Lj6g0012583 Lotus japonicus HOM05D000003 ORTHO05D000007 1.3e-24 117.9 177 41.8
Lj4g0014676 Lotus japonicus HOM05D000003 ORTHO05D000007 1.0e-19 101.7 195 34.9
Lj6g0027241 Lotus japonicus HOM05D000473 ORTHO05D000007 2.2e-19 100.5 193 34.7
Lj2g0019281 Lotus japonicus HOM05D000003 ORTHO05D000007 3.5e-17 93.2 165 37.0
Lj6g0015369 Lotus japonicus HOM05D000003 ORTHO05D000007 1.0e-16 91.7 211 32.2
Lj2g0021734 Lotus japonicus HOM05D000003 ORTHO05D000006 2.3e-16 90.5 193 31.6
Lj3g0011245 Lotus japonicus HOM05D000003 ORTHO05D000007 1.6e-14 84.3 187 32.1
Lj5g0009009 Lotus japonicus HOM05D000003 ORTHO05D000007 1.6e-14 84.3 84 45.2
Lj6g0007219 Lotus japonicus HOM05D000003 ORTHO05D000007 2.8e-14 83.6 167 31.1
Lj6g0024012 Lotus japonicus HOM05D000003 ORTHO05D000007 2.4e-13 80.5 187 30.5
TPR.G29860 Trifolium pratense HOM05D004401 ORTHO05D005169 6.9e-13 79.0 222 28.8
TWI81G0242 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.9e-13 79.0 219 29.7
Lj1g0011911 Lotus japonicus HOM05D000003 ORTHO05D000007 9.0e-13 78.6 230 27.4
Lj4g0003656 Lotus japonicus HOM05D000003 ORTHO05D000007 1.2e-12 78.2 200 30.0
Lj3g0019048 Lotus japonicus HOM05D000003 ORTHO05D000007 7.6e-12 75.5 153 32.7
Lj5g0016382 Lotus japonicus HOM05D000003 ORTHO05D000007 7.6e-12 75.5 202 30.2
Lj5g0003428 Lotus japonicus HOM05D000003 ORTHO05D000007 1.3e-11 74.7 188 31.4
Lj1g0010773 Lotus japonicus HOM05D000003 ORTHO05D000007 1.7e-11 74.3 174 29.3
Lj4g0024296 Lotus japonicus HOM05D000003 ORTHO05D000007 1.7e-11 74.3 314 26.8
TPR.G32099 Trifolium pratense HOM05D000003 ORTHO05D000007 1.7e-11 74.3 161 33.5
Lj1g0004894 Lotus japonicus HOM05D000003 ORTHO05D000007 6.5e-11 72.4 81 42.0
Lj5g0009117 Lotus japonicus HOM05D000003 ORTHO05D029824 1.9e-10 70.9 257 31.5
TPR.G22534 Trifolium pratense HOM05D000003 ORTHO05D000007 3.2e-10 70.1 156 31.4
TPR.G29549 Trifolium pratense HOM05D000003 ORTHO05D000007 4.2e-10 69.7 88 39.8
PSO832G0039 Papaver somniferum HOM05D000003 ORTHO05D000007 5.5e-10 69.3 201 29.4
TPR.G39739 Trifolium pratense HOM05D000003 ORTHO05D000007 7.2e-10 68.9 191 28.3
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-09 68.2 89 46.1
Lj3g0003086 Lotus japonicus HOM05D000003 ORTHO05D000006 1.6e-09 67.8 186 30.6
TPR.G511 Trifolium pratense HOM05D000003 ORTHO05D000007 2.7e-09 67.0 91 38.5
TPR.G23335 Trifolium pratense HOM05D000003 ORTHO05D000007 3.6e-09 66.6 81 39.5
Rhsim09G0202100 Rhododendron simsii HOM05D000003 ORTHO05D000007 4.6e-09 66.2 169 27.8
COL.COLO4_28420 Corchorus olitorius HOM05D016024 ORTHO05D000007 6.1e-09 65.9 176 29.5
Manes.07G103102 Manihot esculenta HOM05D000003 ORTHO05D000004 3.9e-08 63.2 214 28.0
PSO017G5897 Papaver somniferum HOM05D000003 ORTHO05D000007 3.9e-08 63.2 214 25.7
Lj4g0010109 Lotus japonicus HOM05D000003 ORTHO05D000007 5.1e-08 62.8 175 30.3
Lj3g0019542 Lotus japonicus HOM05D021482 ORTHO05D000007 8.7e-08 62.0 86 34.9
EL10Ac5g10755 Beta vulgaris HOM05D000003 ORTHO05D000007 1.1e-07 61.6 255 24.7
QL01p003323 Quercus lobata HOM05D002710 ORTHO05D002905 1.1e-07 61.6 83 30.1
Psat5g114840 Pisum sativum HOM05D000003 ORTHO05D000006 1.5e-07 61.2 91 33.0
Dinv07064 Davidia involucrata HOM05D000003 ORTHO05D000007 1.9e-07 60.8 205 26.8
Atru.chr4.106 Acer truncatum HOM05D000003 ORTHO05D000007 2.5e-07 60.5 148 27.7
Gorai.006G161900 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.5e-07 60.5 91 34.1
Gorai.010G180600 Gossypium raimondii HOM05D000003 ORTHO05D000007 2.5e-07 60.5 83 36.1
Lj3g0015936 Lotus japonicus HOM05D000003 ORTHO05D000007 4.3e-07 59.7 86 33.7
Lj5g0001706 Lotus japonicus HOM05D000003 ORTHO05D000007 5.7e-07 59.3 175 29.7
QL08p055576 Quercus lobata HOM05D000078 ORTHO05D000007 7.4e-07 58.9 83 28.9
QL01p027762 Quercus lobata HOM05D000003 ORTHO05D000006 9.7e-07 58.5 80 32.5
QL01p027824 Quercus lobata HOM05D000003 ORTHO05D000006 9.7e-07 58.5 80 32.5
Gorai.009G311100 Gossypium raimondii HOM05D000003 ORTHO05D000007 1.3e-06 58.2 83 34.9
Atru.chr7.255 Acer truncatum HOM05D000003 ORTHO05D000007 1.6e-06 57.8 139 32.4
Lj3g0002364 Lotus japonicus HOM05D000003 ORTHO05D000007 1.6e-06 57.8 86 33.7
QL06p011077 Quercus lobata HOM05D000003 ORTHO05D000007 1.6e-06 57.8 83 30.1
Atru.chr11.84 Acer truncatum HOM05D000003 ORTHO05D000007 2.2e-06 57.4 91 35.2
Prupe.1G179200 Prunus persica HOM05D000003 ORTHO05D000007 2.2e-06 57.4 76 39.5
TPR.G34138 Trifolium pratense HOM05D000003 ORTHO05D000007 2.2e-06 57.4 87 34.5
C03p14460 Brassica napus HOM05D000003 ORTHO05D000007 2.8e-06 57.0 83 33.7
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 2.8e-06 57.0 84 32.1
QL02p083425 Quercus lobata HOM05D000003 ORTHO05D000007 2.8e-06 57.0 81 30.9
QL02p080468 Quercus lobata HOM05D000003 ORTHO05D000007 3.7e-06 56.6 80 33.8
PSO017G4416 Papaver somniferum HOM05D000003 ORTHO05D000007 4.8e-06 56.2 195 25.6
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 4.8e-06 56.2 167 26.3
Atru.chr7.120 Acer truncatum HOM05D000003 ORTHO05D000004 6.3e-06 55.8 213 26.3
Lj4g0016016 Lotus japonicus HOM05D000003 ORTHO05D000007 6.3e-06 55.8 219 26.0
QL08p011545 Quercus lobata HOM05D034856 ORTHO05D000007 6.3e-06 55.8 166 25.9
CSS0029354 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.2e-06 55.5 81 34.6
Lj1g0021200 Lotus japonicus HOM05D000003 ORTHO05D000007 8.2e-06 55.5 53 45.3
Psat5g160400 Pisum sativum HOM05D000003 ORTHO05D000007 8.2e-06 55.5 118 30.5


User provided reference genes

Program Settings