Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6g0002536 Lotus japonicus HOM05D003887 ORTHO05D004523 1.0e-70 270.0 138 100.0
Psat3g027720 Pisum sativum HOM05D001091 ORTHO05D004523 1.3e-41 173.3 136 63.2
Glyma.07G068300 Glycine max HOM05D003887 ORTHO05D004523 3.7e-41 171.8 126 65.9
Psat5g004600 Pisum sativum HOM05D003887 ORTHO05D004523 6.3e-41 171.0 124 66.9
Medtr2g088720 Medicago truncatula HOM05D003887 ORTHO05D004523 1.1e-40 170.2 124 67.7
Ca_09068_v3 Cicer arietinum L. HOM05D003887 ORTHO05D004523 5.4e-40 167.9 124 64.5
Glyma.03G203800 Glycine max HOM05D003887 ORTHO05D004523 1.2e-39 166.8 123 65.0
Lj1g0007196 Lotus japonicus HOM05D003887 ORTHO05D004523 2.0e-39 166.0 126 65.9
Medtr7g106600 Medicago truncatula HOM05D003887 ORTHO05D004523 2.7e-39 165.6 124 65.3
VMungo1215G2564 Vigna mungo HOM05D003887 ORTHO05D004523 3.5e-39 165.2 121 66.1
TPR.G25788 Trifolium pratense HOM05D003887 ORTHO05D004523 4.5e-39 164.9 128 62.5
Phvul.001G204200 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 5.9e-39 164.5 123 65.0
VMungo1383G2471 Vigna mungo HOM05D003887 ORTHO05D004523 1.3e-38 163.3 123 63.4
Phvul.001G197300 Phaseolus vulgaris HOM05D003887 ORTHO05D004523 1.7e-38 162.9 122 64.8
Lj6g0023596 Lotus japonicus HOM05D003887 ORTHO05D004523 2.2e-38 162.5 122 64.8
GSVIVG01028462001 Vitis vinifera HOM05D003887 ORTHO05D004523 4.2e-37 158.3 129 57.4
TWI18G1123 Tripterygium wilfordii HOM05D003887 ORTHO05D004523 7.2e-37 157.5 119 63.0
Glyma.16G034300 Glycine max HOM05D003887 ORTHO05D004523 1.2e-36 156.8 126 61.1
Medtr7g106580 Medicago truncatula HOM05D003887 ORTHO05D004523 1.2e-36 156.8 124 62.9
CiPaw.09G022700 Carya illinoinensis HOM05D003887 ORTHO05D004523 3.6e-36 155.2 119 63.0
Nn5g28552 Nelumbo nucifera HOM05D003887 ORTHO05D004523 4.7e-36 154.8 129 57.4
MD12G1043200 Malus domestica HOM05D003887 ORTHO05D004523 6.1e-36 154.5 125 58.4
PGR142G0321 Punica granatum HOM05D003887 ORTHO05D004523 8.0e-36 154.1 119 62.2
Manes.08G035800 Manihot esculenta HOM05D003887 ORTHO05D004523 1.0e-35 153.7 123 59.3
Nn1g06263 Nelumbo nucifera HOM05D003887 ORTHO05D004523 1.0e-35 153.7 127 59.1
FvH4_6g20690 Fragaria vesca HOM05D003887 ORTHO05D004523 1.4e-35 153.3 125 57.6
FAN02G3629 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.4e-35 153.3 125 57.6
FAN05G1982 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.4e-35 153.3 125 57.6
FAN14G0913 Fragaria x ananassa HOM05D003887 ORTHO05D004523 1.4e-35 153.3 125 57.6
Potri.016G067200 Populus trichocarpa HOM05D003887 ORTHO05D004523 1.4e-35 153.3 124 58.1
Lj6g0002343 Lotus japonicus HOM05D003887 ORTHO05D004523 1.8e-35 152.9 122 63.9
TAR265G0002 Trochodendron aralioides HOM05D003887 ORTHO05D004523 2.3e-35 152.5 123 61.8
arahy.Tifrunner.gnm1.ann1.Z0QHZD Arachis hypogaea HOM05D003887 ORTHO05D004523 3.0e-35 152.1 124 61.3
CANSAT64G2672 Cannabis sativa HOM05D003887 ORTHO05D004523 4.0e-35 151.8 119 61.3
FAN05G1871 Fragaria x ananassa HOM05D003887 ORTHO05D004523 4.0e-35 151.8 124 57.3
QL02p078458 Quercus lobata HOM05D003887 ORTHO05D004523 4.0e-35 151.8 119 62.2
QL10p000363 Quercus lobata HOM05D003887 ORTHO05D004523 4.0e-35 151.8 119 62.2
Sopen10g030440 Solanum pennellii HOM05D003887 ORTHO05D004523 4.0e-35 151.8 119 58.8
RcHm_v2.0_Chr3g0476591 Rosa chinensis HOM05D003887 ORTHO05D004523 5.2e-35 151.4 125 56.8
Duzib128G1521 Durio zibethinus HOM05D003887 ORTHO05D004523 1.5e-34 149.8 119 60.5
FAN09G3131 Fragaria x ananassa HOM05D003887 ORTHO05D004523 2.0e-34 149.4 125 56.8
Hma1.2p1_0969F.1_g242620 Hydrangea macrophylla HOM05D003887 ORTHO05D004523 2.0e-34 149.4 122 55.7
MD14G1042300 Malus domestica HOM05D003887 ORTHO05D004523 2.0e-34 149.4 125 56.8
Ciclev10013089m.g Citrus clementina HOM05D003887 ORTHO05D004523 2.6e-34 149.1 124 55.6
Gohir.D01G122500 Gossypium hirsutum HOM05D003887 ORTHO05D004523 2.6e-34 149.1 119 58.8
Gorai.002G153400 Gossypium raimondii HOM05D003887 ORTHO05D004523 2.6e-34 149.1 119 58.8
Solyc10g079830.3 Solanum lycopersicum HOM05D003887 ORTHO05D004523 3.4e-34 148.7 119 58.0
COL.COLO4_29521 Corchorus olitorius HOM05D003887 ORTHO05D004523 5.7e-34 147.9 119 59.7
Prupe.7G091600 Prunus persica HOM05D003887 ORTHO05D004523 5.7e-34 147.9 125 56.0
PGSC0003DMG400029847 Solanum tuberosum HOM05D003887 ORTHO05D004523 5.7e-34 147.9 118 57.6
CAN.G1237.27 Capsicum annuum HOM05D003887 ORTHO05D004523 7.5e-34 147.5 123 54.5
ECA233G2913 Erigeron canadensis HOM05D003887 ORTHO05D004523 7.5e-34 147.5 119 57.1
Lj9C712T7 Lonicera japonica HOM05D003887 ORTHO05D004523 7.5e-34 147.5 124 54.8
Cpa.g.sc104.4 Carica papaya HOM05D003887 ORTHO05D004523 9.8e-34 147.1 124 56.5
Lalb_Chr20g0111271 Lupinus albus HOM05D003887 ORTHO05D004523 9.8e-34 147.1 121 60.3
vmacro07505 Vaccinium macrocarpon HOM05D003887 ORTHO05D004523 9.8e-34 147.1 121 57.9
Aqoxy2G02430 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 1.3e-33 146.7 118 58.5
Gohir.A01G135300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 1.3e-33 146.7 119 57.1
TAR633G0863 Trochodendron aralioides HOM05D003887 ORTHO05D004523 1.3e-33 146.7 119 58.0
Duzib106G1345 Durio zibethinus HOM05D003887 ORTHO05D004523 1.7e-33 146.4 119 59.7
Cc06_g20890 Coffea canephora HOM05D003887 ORTHO05D004523 2.2e-33 146.0 124 54.0
Cc06_g06820 Coffea canephora HOM05D003887 ORTHO05D004523 2.8e-33 145.6 119 56.3
Eucgr.G00614 Eucalyptus grandis HOM05D003887 ORTHO05D004523 2.8e-33 145.6 126 57.9
Aqoxy1G00605 Aquilegia oxysepala HOM05D003887 ORTHO05D004523 6.3e-33 144.4 118 55.9
Haze_20135 Corylus avellana HOM05D003887 ORTHO05D004523 6.3e-33 144.4 119 59.7
Gohir.D04G154300 Gossypium hirsutum HOM05D003887 ORTHO05D004523 6.3e-33 144.4 119 57.1
Gorai.012G141600 Gossypium raimondii HOM05D003887 ORTHO05D004523 6.3e-33 144.4 119 57.1
Lsat_1_v5_gn_6_34741 Lactuca sativa HOM05D003887 ORTHO05D004523 6.3e-33 144.4 119 55.5
Sabra16G0068500 Salix brachista HOM05D003887 ORTHO05D004523 6.3e-33 144.4 121 57.0
Lj3C240T1 Lonicera japonica HOM05D003887 ORTHO05D004523 8.3e-33 144.1 119 58.0
Atru.chr8.1305 Acer truncatum HOM05D003887 ORTHO05D004523 1.1e-32 143.7 124 58.1
MBI07_g23221_MAGBIO Magnolia biondii HOM05D003887 ORTHO05D004523 1.1e-32 143.7 118 59.3
Sc06g0008630 Simmondsia chinensis HOM05D003887 ORTHO05D004523 1.1e-32 143.7 120 55.8
CAN.G1656.10 Capsicum annuum HOM05D003887 ORTHO05D004523 1.4e-32 143.3 124 51.6
Os09g0560500 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 1.4e-32 143.3 121 56.2
QL07p027116 Quercus lobata HOM05D003887 ORTHO05D004523 1.4e-32 143.3 119 56.3
CSS0042801 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 1.8e-32 142.9 116 57.8
Nitab4.5_0008674g0010 Nicotiana tabacum HOM05D003887 ORTHO05D004523 3.1e-32 142.1 123 53.7
Thecc.05G108100 Theobroma cacao HOM05D003887 ORTHO05D004523 3.1e-32 142.1 123 56.1
Gohir.A04G113000 Gossypium hirsutum HOM05D003887 ORTHO05D004523 9.1e-32 140.6 119 55.5
HanXRQChr13g0398651 Helianthus annuus HOM05D003887 ORTHO05D004523 1.2e-31 140.2 110 58.2
Os08g0556200 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 1.2e-31 140.2 124 54.8
SHI28303 Sapria himalayana HOM05D003887 ORTHO05D004523 1.2e-31 140.2 118 55.1
PSO513G0097 Papaver somniferum HOM05D003887 ORTHO05D004523 1.6e-31 139.8 118 56.8
MSTRG.26582 Avicennia marina HOM05D003887 ORTHO05D004523 2.0e-31 139.4 119 54.6
DCAR_020685 Daucus carota HOM05D003887 ORTHO05D004523 2.0e-31 139.4 119 54.6
unitig_899.g14853 Utricularia gibba HOM05D003887 ORTHO05D004523 2.0e-31 139.4 119 52.1
Ah.08g222240 Amaranthus hybridus HOM05D003887 ORTHO05D004523 2.7e-31 139.0 119 55.5
ATR0730G208 Amborella trichopoda HOM05D003887 ORTHO05D004523 2.7e-31 139.0 123 52.8
ATR0730G166 Amborella trichopoda HOM05D003887 ORTHO05D004523 4.5e-31 138.3 123 53.7
Peaxi162Scf00130g01133 Petunia axillaris HOM05D003887 ORTHO05D004523 4.5e-31 138.3 123 51.2
PSO339G1162 Papaver somniferum HOM05D003887 ORTHO05D004523 5.9e-31 137.9 126 52.4
PSO782G0206 Papaver somniferum HOM05D003887 ORTHO05D004523 5.9e-31 137.9 119 54.6
MSTRG.10420 Avicennia marina HOM05D003887 ORTHO05D004523 1.0e-30 137.1 123 51.2
Migut.L01853 Erythranthe guttata HOM05D003887 ORTHO05D004523 1.0e-30 137.1 124 52.4
PSO513G0196 Papaver somniferum HOM05D003887 ORTHO05D004523 1.0e-30 137.1 116 53.4
PSO339G2059 Papaver somniferum HOM05D003887 ORTHO05D004523 1.3e-30 136.7 118 55.1
Hund18807 Selenicereus undatus HOM05D003887 ORTHO05D004523 1.3e-30 136.7 118 55.1
MELO3C019050.2 Cucumis melo HOM05D003887 ORTHO05D004523 1.7e-30 136.3 123 48.8
CsaV3_4G004540 Cucumis sativus L. HOM05D003887 ORTHO05D004523 1.7e-30 136.3 123 49.6
CDE02G3355 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 2.3e-30 136.0 121 54.5
AL3G23320 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 2.9e-30 135.6 127 55.1
AUR62020206 Chenopodium quinoa HOM05D003887 ORTHO05D004523 2.9e-30 135.6 124 53.2
Sc06g0010620 Simmondsia chinensis HOM05D003887 ORTHO05D004523 2.9e-30 135.6 116 55.2
ClCG04G001280 Citrullus lanatus HOM05D003887 ORTHO05D004523 6.6e-30 134.4 123 48.8
BcaC09g48199 Brassica carinata HOM05D003887 ORTHO05D004523 1.1e-29 133.7 119 56.3
BolC1t05293H Brassica oleracea HOM05D003887 ORTHO05D004523 1.1e-29 133.7 119 56.3
BraA01t04162Z Brassica rapa HOM05D003887 ORTHO05D004523 1.1e-29 133.7 119 56.3
Sed0005545 Sechium edule HOM05D003887 ORTHO05D004523 1.1e-29 133.7 118 50.8
AagrBONN_evm.TU.Sc2ySwM_117.2540 Anthoceros agrestis HOM05D003887 ORTHO05D004523 1.5e-29 133.3 118 50.0
Rhsim03G0059700 Rhododendron simsii HOM05D003887 ORTHO05D004523 1.5e-29 133.3 133 51.9
AT3G11750 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 3.3e-29 132.1 125 54.4
Glyma.19G201200 Glycine max HOM05D003887 ORTHO05D004523 3.3e-29 132.1 122 59.8
Os06g0154600 Oryza sativa ssp. japonica HOM05D003887 ORTHO05D004523 4.2e-29 131.7 121 51.2
SEGI_09372 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 5.5e-29 131.3 116 54.3
BcaB06g25586 Brassica carinata HOM05D003887 ORTHO05D004523 7.2e-29 131.0 119 52.9
A05p37590 Brassica napus HOM05D003887 ORTHO05D004523 7.2e-29 131.0 119 54.6
BraA05t22557Z Brassica rapa HOM05D003887 ORTHO05D004523 7.2e-29 131.0 119 54.6
SGA_v2.0_scaffold392G50674 Striga asiatica HOM05D003887 ORTHO05D004523 7.2e-29 131.0 119 52.9
Zm00001eb039830 Zea mays HOM05D003887 ORTHO05D004523 7.2e-29 131.0 118 55.1
BcaB02g09713 Brassica carinata HOM05D003887 ORTHO05D004523 1.2e-28 130.2 121 54.5
BcaC05g29334 Brassica carinata HOM05D003887 ORTHO05D004523 1.2e-28 130.2 119 52.1
C05p56150 Brassica napus HOM05D003887 ORTHO05D004523 1.2e-28 130.2 119 52.1
Actinidia03974 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.6e-28 129.8 120 52.5
BcaB04g21119 Brassica carinata HOM05D003887 ORTHO05D004523 1.6e-28 129.8 119 56.3
BraA05t22556Z Brassica rapa HOM05D003887 ORTHO05D004523 1.6e-28 129.8 119 52.9
Thhalv10021697m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 1.6e-28 129.8 119 55.5
PSO210G2693 Papaver somniferum HOM05D003887 ORTHO05D004523 2.1e-28 129.4 118 50.0
Sp3g09980 Schrenkiella parvula HOM05D003887 ORTHO05D004523 2.1e-28 129.4 120 54.2
Zm00001eb039720 Zea mays HOM05D003887 ORTHO05D004523 2.1e-28 129.4 118 54.2
AT5G62980 Arabidopsis thaliana HOM05D003887 ORTHO05D004523 2.8e-28 129.0 120 57.5
Carub.0003s1109 Capsella rubella HOM05D003887 ORTHO05D004523 2.8e-28 129.0 119 55.5
Aa31LG3G5210 Aethionema arabicum HOM05D003887 ORTHO05D004523 3.6e-28 128.6 120 55.0
CARHR276790 Cardamine hirsuta HOM05D003887 ORTHO05D004523 3.6e-28 128.6 122 54.9
HanXRQChr01g0028311 Helianthus annuus HOM05D003887 ORTHO05D004523 4.7e-28 128.3 110 54.5
A05p37580 Brassica napus HOM05D003887 ORTHO05D004523 8.0e-28 127.5 119 52.1
SEGI_12007 Sequoiadendron giganteum HOM05D003887 ORTHO05D004523 8.0e-28 127.5 116 52.6
EL10Ac7g16270 Beta vulgaris HOM05D003887 ORTHO05D004523 1.0e-27 127.1 118 50.8
arahy.Tifrunner.gnm1.ann1.K0K91E Arachis hypogaea HOM05D003887 ORTHO05D004523 1.4e-27 126.7 124 54.8
Oeu020172.1 Olea europaea HOM05D003887 ORTHO05D004523 1.4e-27 126.7 119 51.3
THA.LOC104826798 Tarenaya hassleriana HOM05D003887 ORTHO05D004523 1.8e-27 126.3 123 53.7
AL8G40010 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 4.0e-27 125.2 120 53.3
CDE09G0948 Ceratophyllum demersum HOM05D003887 ORTHO05D004523 4.0e-27 125.2 108 55.6
Pp3c1_42850 Physcomitrium patens HOM05D003887 ORTHO05D004523 4.0e-27 125.2 116 50.9
Thhalv10005125m.g Eutrema salsugineum HOM05D003887 ORTHO05D004523 5.2e-27 124.8 120 53.3
SalBow7G3037 Salvia bowleyana HOM05D003887 ORTHO05D004523 5.2e-27 124.8 123 49.6
Gohir.A04G112940 Gossypium hirsutum HOM05D003887 ORTHO05D004523 6.8e-27 124.4 103 56.3
Aa31LG3G5230 Aethionema arabicum HOM05D003887 ORTHO05D004523 8.9e-27 124.0 120 52.5
Actinidia03866 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.2e-26 123.6 120 50.8
Carub.0008s2369 Capsella rubella HOM05D003887 ORTHO05D004523 2.0e-26 122.9 120 53.3
SMO351G0485 Selaginella moellendorffii HOM05D003887 ORTHO05D004523 2.6e-26 122.5 117 49.6
AUR62042906 Chenopodium quinoa HOM05D003887 ORTHO05D004523 4.4e-26 121.7 110 52.7
Nitab4.5_0000677g0080 Nicotiana tabacum HOM05D003887 ORTHO05D004523 5.7e-26 121.3 124 47.6
Mapoly0109s0052 Marchantia polymorpha HOM05D003887 ORTHO05D004523 6.3e-25 117.9 130 42.3
ECA232G3477 Erigeron canadensis HOM05D003887 ORTHO05D004523 8.3e-25 117.5 108 50.0
DCAR_009071 Daucus carota HOM05D003887 ORTHO05D004523 5.9e-23 111.3 128 47.7
AL3G35860 Arabidopsis lyrata HOM05D003887 ORTHO05D004523 3.9e-22 108.6 134 41.0
Actinidia06188 Actinidia chinensis HOM05D003887 ORTHO05D004523 1.6e-15 86.7 62 61.3
HPP92_016697 Vanilla planifolia HOM05D003887 ORTHO05D004523 2.0e-15 86.3 79 53.2
PGSC0003DMG400007623 Solanum tuberosum HOM05D003887 ORTHO05D004523 6.6e-14 81.3 62 58.1
Mapoly0121s0041 Marchantia polymorpha HOM05D003887 ORTHO05D004523 9.5e-13 77.4 70 48.6
arahy.Tifrunner.gnm1.ann1.3PGZ0K Arachis hypogaea HOM05D003887 ORTHO05D004523 1.2e-12 77.0 63 58.7
arahy.Tifrunner.gnm1.ann1.97GEQU Arachis hypogaea HOM05D003887 ORTHO05D004523 3.6e-12 75.5 63 58.7
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 4.7e-12 75.1 53 62.3
arahy.Tifrunner.gnm1.ann1.T8NVRB Arachis hypogaea HOM05D003887 ORTHO05D004523 1.1e-11 73.9 65 53.8
Gorai.006G076900 Gossypium raimondii HOM05D003887 ORTHO05D004523 6.8e-11 71.2 55 60.0
Gohir.D09G062150 Gossypium hirsutum HOM05D003887 ORTHO05D004523 8.9e-11 70.9 52 63.5
Cre02.g097450 Chlamydomonas reinhardtii HOM05D003887 ORTHO05D004523 1.2e-10 70.5 110 33.6
Mapoly0003s0213 Marchantia polymorpha HOM05D003887 ORTHO05D004523 2.6e-10 69.3 122 33.6
Nitab4.5_0000936g0150 Nicotiana tabacum HOM05D003887 ORTHO05D004523 4.4e-10 68.6 82 46.3
Rhsim03G0060000 Rhododendron simsii HOM05D003887 ORTHO05D004523 7.5e-10 67.8 64 53.1
Rhsim03G0060200 Rhododendron simsii HOM05D003887 ORTHO05D004523 7.5e-10 67.8 64 53.1
CSS0033244 Camellia sinensis var. sinensis HOM05D003887 ORTHO05D004523 8.3e-09 64.3 64 48.4


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