Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.7e-84 315.8 152 100.0
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.1e-70 270.0 146 89.0
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 1.1e-70 270.0 146 89.0
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.4e-70 269.6 146 89.0
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 1.9e-70 269.2 146 88.4
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 1.9e-70 269.2 146 88.4
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 2.5e-70 268.9 146 88.4
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.5e-70 268.9 146 87.7
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 2.5e-70 268.9 146 88.4
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.5e-70 268.9 146 88.4
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 4.2e-70 268.1 146 87.7
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 5.5e-70 267.7 146 87.7
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 7.1e-70 267.3 146 87.0
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 9.3e-70 266.9 146 87.0
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 9.3e-70 266.9 146 87.7
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.0
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.0
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.2e-69 266.5 146 87.7
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.6e-69 266.2 146 87.7
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.6e-69 266.2 146 87.7
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.6e-69 266.2 146 87.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.6e-69 266.2 146 87.0
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.1e-69 265.8 146 87.0
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 2.1e-69 265.8 146 87.0
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.7e-69 265.4 146 87.7
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 2.7e-69 265.4 146 87.7
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 86.3
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 86.3
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 87.0
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 86.3
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 3.5e-69 265.0 146 86.3
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.6e-69 264.6 146 87.0
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 6.0e-69 264.2 146 86.3
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 6.0e-69 264.2 146 87.0
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.0e-69 264.2 142 89.4
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.0e-69 264.2 142 89.4
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.0e-69 264.2 142 89.4
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.0e-69 264.2 142 89.4
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 6.0e-69 264.2 146 87.0
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 6.0e-69 264.2 146 86.3
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 6.0e-69 264.2 146 87.0
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 86.3
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 85.6
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 85.6
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 86.3
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 87.0
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 87.0
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 87.0
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 7.9e-69 263.8 146 86.3
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.0e-68 263.5 146 86.3
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.3e-68 263.1 146 85.6
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 1.3e-68 263.1 146 86.3
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.8e-68 262.7 146 86.3
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.8e-68 262.7 146 86.3
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 1.8e-68 262.7 146 86.3
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.3e-68 262.3 146 86.3
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.3e-68 262.3 146 86.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.0e-68 261.9 146 85.6
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.0e-68 261.9 146 86.3
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 3.0e-68 261.9 146 86.3
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.0e-68 261.9 146 85.6
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.9e-68 261.5 146 85.6
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.9e-68 261.5 129 96.1
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 5.1e-68 261.2 146 85.6
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 6.7e-68 260.8 146 85.6
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 8.7e-68 260.4 146 84.2
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 8.7e-68 260.4 146 84.9
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.1e-67 260.0 146 84.9
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.1e-67 260.0 146 85.6
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 1.1e-67 260.0 146 84.2
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 1.5e-67 259.6 146 84.9
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.5e-67 259.6 146 84.9
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.9e-67 259.2 146 84.9
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.5e-67 258.8 146 84.9
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 2.5e-67 258.8 146 84.9
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 2.5e-67 258.8 146 82.9
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 2.5e-67 258.8 146 84.9
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.9
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.9
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.2
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.2
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.2
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.3e-67 258.1 146 84.2
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 5.7e-67 257.7 146 83.6
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 7.4e-67 257.3 146 84.2
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 7.4e-67 257.3 146 84.2
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 9.6e-67 256.9 146 83.6
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 9.6e-67 256.9 146 83.6
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 1.6e-66 256.1 146 83.6
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 4.8e-66 254.6 146 82.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 8.2e-66 253.8 146 83.6
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.1e-65 253.4 146 81.5
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.8e-65 252.7 146 82.2
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 3.1e-65 251.9 146 80.8
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 9.0e-65 250.4 146 82.2
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.6e-64 248.8 132 90.2
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 7.6e-64 247.3 146 78.8
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.0e-63 246.9 132 88.6
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.4e-62 243.0 146 79.5
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 3.3e-59 231.9 146 74.7
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 6.3e-58 227.6 146 73.3
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 3.1e-57 225.3 128 84.4
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.1e-54 216.9 146 73.3
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.5e-54 215.7 126 81.7
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 2.5e-54 215.7 132 75.8
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.5e-54 214.5 149 73.2
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.5e-43 179.9 107 79.4
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.7e-31 139.8 73 89.0
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.9e-30 136.3 99 65.7
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.4e-27 125.6 150 42.7
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 4.2e-22 108.6 67 74.6
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-21 107.1 83 63.9
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 8.3e-18 94.4 79 59.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 2.0e-16 89.7 62 67.7
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 4.0e-12 75.5 78 52.6
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 3.4e-11 72.4 39 84.6
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 5.0e-07 58.5 26 100.0


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