Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P812T17 Lonicera japonica HOM05D002002 ORTHO05D008797 3.9e-87 325.1 205 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 6.5e-18 95.1 155 54.2
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 2.5e-17 93.2 165 45.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 4.7e-16 89.0 160 40.0
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 3.0e-15 86.3 155 44.5
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 4.0e-15 85.9 164 42.7
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 5.2e-15 85.5 155 43.2
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 1.2e-14 84.3 155 45.8
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 1.2e-14 84.3 149 44.3
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 2.0e-14 83.6 159 39.0
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 2.4e-12 76.6 97 49.5
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 7.0e-12 75.1 150 52.0
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 7.0e-12 75.1 149 52.3
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 7.0e-12 75.1 161 39.8
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 9.2e-12 74.7 144 45.1
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.2e-11 74.3 148 46.6
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 1.3e-10 70.9 82 57.3
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 2.3e-10 70.1 160 39.4
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.9e-10 69.7 148 37.2
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 3.8e-10 69.3 188 36.2
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 8.6e-10 68.2 144 43.8
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 3.3e-09 66.2 101 46.5
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 4.3e-09 65.9 158 42.4
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 7.3e-09 65.1 155 36.8
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 1.6e-08 63.9 101 46.5
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 2.1e-08 63.5 196 36.7
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 3.6e-08 62.8 151 47.0
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 3.6e-08 62.8 148 39.2
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 1.0e-07 61.2 154 32.5
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 1.0e-07 61.2 139 48.9
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.4e-07 60.8 66 60.6
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 3.0e-07 59.7 161 38.5
TPR.G3088 Trifolium pratense HOM05D001978 ORTHO05D010457 5.2e-07 58.9 136 36.0
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 6.8e-07 58.5 99 44.4
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 6.8e-07 58.5 82 46.3
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 8.9e-07 58.2 103 55.3
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 8.9e-07 58.2 108 38.9
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.5e-06 57.4 151 36.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 2.6e-06 56.6 107 40.2
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 2.6e-06 56.6 158 36.7


User provided reference genes

Program Settings