Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P782T102 Lonicera japonica HOM05D003853 ORTHO05D004171 8.3e-65 250.4 139 100.0
Cfa008902 Carpinus fangiana HOM05D003853 ORTHO05D004171 9.5e-29 130.6 150 56.7
CiPaw.05G127700 Carya illinoinensis HOM05D003853 ORTHO05D004171 2.3e-27 125.9 148 53.4
Dinv16707 Davidia involucrata HOM05D003853 ORTHO05D004171 2.3e-27 125.9 133 57.1
Haze_11978 Corylus avellana HOM05D003853 ORTHO05D004171 6.8e-27 124.4 150 56.7
TAR622G0811 Trochodendron aralioides HOM05D003853 ORTHO05D004171 8.9e-27 124.0 149 58.4
Nitab4.5_0000014g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 2.0e-26 122.9 135 55.6
Oeu048150.1 Olea europaea HOM05D003853 ORTHO05D004171 5.8e-26 121.3 157 48.4
Nitab4.5_0002806g0050 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.1e-24 117.1 145 50.3
Sopen04g001500 Solanum pennellii HOM05D003853 ORTHO05D004171 1.1e-24 117.1 134 53.0
Solyc04g005480.1 Solanum lycopersicum HOM05D003853 ORTHO05D004171 1.4e-24 116.7 133 53.4
Nn4g23335 Nelumbo nucifera HOM05D003853 ORTHO05D004171 2.4e-24 115.9 131 59.5
Hma1.2p1_0354F.1_g133590 Hydrangea macrophylla HOM05D003853 ORTHO05D004171 3.2e-24 115.5 154 53.2
Thecc.02G335500 Theobroma cacao HOM05D003853 ORTHO05D004171 3.2e-24 115.5 143 53.8
PGSC0003DMG400035643 Solanum tuberosum HOM05D003853 ORTHO05D004171 4.1e-24 115.2 133 51.1
Duzib251G0928 Durio zibethinus HOM05D003853 ORTHO05D004171 6.0e-23 111.3 139 59.0
TWI75G0276 Tripterygium wilfordii HOM05D003853 ORTHO05D004171 3.9e-22 108.6 145 46.9
Sc04g0007740 Simmondsia chinensis HOM05D003853 ORTHO05D004171 5.1e-22 108.2 141 44.0
BcaC06g31183 Brassica carinata HOM05D003853 ORTHO05D004171 6.6e-22 107.8 143 46.2
COL.COLO4_27925 Corchorus olitorius HOM05D003853 ORTHO05D004171 8.6e-22 107.5 152 51.3
Potri.008G093200 Populus trichocarpa HOM05D003853 ORTHO05D004171 8.6e-22 107.5 131 49.6
CiPaw.05G127600 Carya illinoinensis HOM05D003853 ORTHO05D004171 1.5e-21 106.7 145 52.4
AT2G03440 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 2.5e-21 105.9 123 50.4
MSTRG.7763 Avicennia marina HOM05D003853 ORTHO05D004171 3.3e-21 105.5 137 50.4
BcaB07g30301 Brassica carinata HOM05D003853 ORTHO05D004171 3.3e-21 105.5 143 47.6
BraA06t27202Z Brassica rapa HOM05D003853 ORTHO05D004171 3.3e-21 105.5 142 45.8
SGA_v2.0_scaffold16G07759 Striga asiatica HOM05D003853 ORTHO05D004171 4.3e-21 105.1 133 51.9
BcaC06g33998 Brassica carinata HOM05D003853 ORTHO05D004171 5.6e-21 104.8 142 45.8
C07p33870 Brassica napus HOM05D003853 ORTHO05D004171 5.6e-21 104.8 142 45.8
BolC7t43901H Brassica oleracea HOM05D003853 ORTHO05D004171 5.6e-21 104.8 142 45.8
A06p43140 Brassica napus HOM05D003853 ORTHO05D004171 2.1e-20 102.8 142 45.1
Thhalv10004968m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 4.7e-20 101.7 147 44.2
Sabra08G0070000 Salix brachista HOM05D003853 ORTHO05D004171 8.1e-20 100.9 130 50.0
Sp2g14360 Schrenkiella parvula HOM05D003853 ORTHO05D004171 8.1e-20 100.9 146 44.5
AL5G13190 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 1.8e-19 99.8 155 43.2
Duzib251G0287 Durio zibethinus HOM05D003853 ORTHO05D004171 1.8e-19 99.8 119 52.1
Eucgr.B03178 Eucalyptus grandis HOM05D003853 ORTHO05D004171 1.8e-19 99.8 150 44.7
Thecc.02G335600 Theobroma cacao HOM05D003853 ORTHO05D004171 1.8e-19 99.8 125 52.0
Peaxi162Scf00930g00051 Petunia axillaris HOM05D003853 ORTHO05D004171 3.1e-19 99.0 116 53.4
A02p33450 Brassica napus HOM05D003853 ORTHO05D004171 4.0e-19 98.6 139 45.3
C02p51440 Brassica napus HOM05D003853 ORTHO05D004171 4.0e-19 98.6 139 45.3
CARHR145780 Cardamine hirsuta HOM05D003853 ORTHO05D004171 4.0e-19 98.6 148 47.3
Gorai.005G143900 Gossypium raimondii HOM05D003853 ORTHO05D004171 4.0e-19 98.6 119 50.4
BraA02t08366Z Brassica rapa HOM05D003853 ORTHO05D004171 5.2e-19 98.2 145 43.4
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 8.9e-19 97.4 141 50.4
BcaC03g17214 Brassica carinata HOM05D003853 ORTHO05D004171 8.9e-19 97.4 145 43.4
BolC2t11232H Brassica oleracea HOM05D003853 ORTHO05D004171 8.9e-19 97.4 145 43.4
PGR102G0417 Punica granatum HOM05D003853 ORTHO05D004171 8.9e-19 97.4 143 50.3
PGR102G3239 Punica granatum HOM05D003853 ORTHO05D004171 8.9e-19 97.4 143 50.3
Gohir.D02G128200 Gossypium hirsutum HOM05D003853 ORTHO05D004171 1.2e-18 97.1 119 49.6
Sabra10G0122600 Salix brachista HOM05D003853 ORTHO05D004171 1.2e-18 97.1 133 48.1
Lj4g0005239 Lotus japonicus HOM05D003853 ORTHO05D004171 1.5e-18 96.7 138 48.6
Manes.01G030100 Manihot esculenta HOM05D003853 ORTHO05D004171 1.5e-18 96.7 147 51.7
Sabra10G0122700 Salix brachista HOM05D003853 ORTHO05D004171 1.5e-18 96.7 133 48.1
Carub.0005s0241 Capsella rubella HOM05D003853 ORTHO05D004171 2.0e-18 96.3 167 40.7
QL03p070993 Quercus lobata HOM05D003853 ORTHO05D004171 2.0e-18 96.3 125 47.2
QL03p071021 Quercus lobata HOM05D003853 ORTHO05D004171 2.0e-18 96.3 104 52.9
CARHR014300 Cardamine hirsuta HOM05D003853 ORTHO05D004171 1.3e-17 93.6 131 53.4
Gohir.A03G103000 Gossypium hirsutum HOM05D003853 ORTHO05D004171 1.3e-17 93.6 119 50.4
Cpa.g.sc1.97 Carica papaya HOM05D003853 ORTHO05D004171 1.7e-17 93.2 115 49.6
Ciclev10033000m.g Citrus clementina HOM05D003853 ORTHO05D004171 1.7e-17 93.2 138 48.6
Sp1g12030 Schrenkiella parvula HOM05D003853 ORTHO05D004171 1.7e-17 93.2 138 47.1
Cpa.g.sc1.96 Carica papaya HOM05D003853 ORTHO05D004171 2.9e-17 92.4 112 52.7
ATR0111G024 Amborella trichopoda HOM05D003853 ORTHO05D004171 3.8e-17 92.0 127 43.3
Potri.010G161200 Populus trichocarpa HOM05D003853 ORTHO05D004171 3.8e-17 92.0 129 48.1
SGA_v2.0_scaffold287G47154 Striga asiatica HOM05D003853 ORTHO05D004171 3.8e-17 92.0 101 54.5
Sed0005785 Sechium edule HOM05D003853 ORTHO05D004171 4.9e-17 91.7 139 47.5
Phvul.002G168000 Phaseolus vulgaris HOM05D003853 ORTHO05D004171 6.4e-17 91.3 84 60.7
VMungo0251G2653 Vigna mungo HOM05D003853 ORTHO05D004171 6.4e-17 91.3 138 46.4
CSS0028215 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 8.4e-17 90.9 106 52.8
AUR62003133 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.4e-16 90.1 91 56.0
Carub.0001s1363 Capsella rubella HOM05D003853 ORTHO05D004171 1.9e-16 89.7 93 55.9
ClCG05G023860 Citrullus lanatus HOM05D003853 ORTHO05D004171 1.9e-16 89.7 139 51.8
BcaC07g38709 Brassica carinata HOM05D003853 ORTHO05D004171 3.2e-16 89.0 131 53.4
Lalb_Chr05g0215091 Lupinus albus HOM05D003853 ORTHO05D004171 3.2e-16 89.0 70 70.0
MBI16_g00500_MAGBIO Magnolia biondii HOM05D003853 ORTHO05D004171 3.2e-16 89.0 86 59.3
QL03p071009 Quercus lobata HOM05D003853 ORTHO05D004171 5.4e-16 88.2 122 47.5
BcaB03g13123 Brassica carinata HOM05D003853 ORTHO05D004171 9.3e-16 87.4 95 55.8
BcaB03g13120 Brassica carinata HOM05D003853 ORTHO05D004171 1.2e-15 87.0 93 57.0
CSS0045101 Camellia sinensis var. sinensis HOM05D003853 ORTHO05D004171 1.2e-15 87.0 106 51.9
CsaV3_5G033160 Cucumis sativus L. HOM05D003853 ORTHO05D004171 1.2e-15 87.0 138 49.3
C08p16390 Brassica napus HOM05D003853 ORTHO05D004171 2.1e-15 86.3 93 55.9
BraA08t35142Z Brassica rapa HOM05D003853 ORTHO05D004171 2.1e-15 86.3 91 57.1
AT1G13930 Arabidopsis thaliana HOM05D003853 ORTHO05D004171 2.7e-15 85.9 93 57.0
CDE02G2907 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 3.5e-15 85.5 74 60.8
BolC8t49263H Brassica oleracea HOM05D003853 ORTHO05D004171 4.6e-15 85.1 93 54.8
Glyma.20G027200 Glycine max HOM05D003853 ORTHO05D004171 4.6e-15 85.1 80 60.0
DCAR_027453 Daucus carota HOM05D003853 ORTHO05D004171 6.0e-15 84.7 121 47.1
ECA234G0349 Erigeron canadensis HOM05D003853 ORTHO05D004171 6.0e-15 84.7 79 57.0
Glyma.07G226567 Glycine max HOM05D003853 ORTHO05D004171 7.8e-15 84.3 138 43.5
Glyma.07G226633 Glycine max HOM05D003853 ORTHO05D004171 7.8e-15 84.3 138 43.5
AL1G25770 Arabidopsis lyrata HOM05D003853 ORTHO05D004171 1.0e-14 84.0 137 49.6
MELO3C012136.2 Cucumis melo HOM05D003853 ORTHO05D004171 1.0e-14 84.0 140 44.3
Thhalv10008975m.g Eutrema salsugineum HOM05D003853 ORTHO05D004171 1.0e-14 84.0 142 48.6
Ah.03g139160 Amaranthus hybridus HOM05D003853 ORTHO05D004171 1.3e-14 83.6 70 58.6
CDE02G1866 Ceratophyllum demersum HOM05D003853 ORTHO05D004171 1.3e-14 83.6 118 50.8
Nitab4.5_0000334g0290 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.7e-14 83.2 165 38.8
MSTRG.2322 Avicennia marina HOM05D003853 ORTHO05D004171 2.3e-14 82.8 112 46.4
Peaxi162Scf00314g00022 Petunia axillaris HOM05D003853 ORTHO05D004171 2.3e-14 82.8 78 59.0
Ah.03g139140 Amaranthus hybridus HOM05D003853 ORTHO05D004171 3.0e-14 82.4 82 54.9
A08p32180 Brassica napus HOM05D003853 ORTHO05D004171 3.0e-14 82.4 72 63.9
COL.COLO4_27926 Corchorus olitorius HOM05D003853 ORTHO05D004171 3.0e-14 82.4 135 43.0
AUR62007952 Chenopodium quinoa HOM05D003853 ORTHO05D004171 3.9e-14 82.0 66 62.1
SGA_v2.0_scaffold36G14434 Striga asiatica HOM05D003853 ORTHO05D004171 3.9e-14 82.0 85 56.5
Actinidia12318 Actinidia chinensis HOM05D003853 ORTHO05D004171 5.1e-14 81.6 101 52.5
unitig_699.g19910 Utricularia gibba HOM05D003853 ORTHO05D004171 6.6e-14 81.3 90 53.3
Aa31LG4G16180 Aethionema arabicum HOM05D003853 ORTHO05D004171 8.7e-14 80.9 98 52.0
Cc11_g12330 Coffea canephora HOM05D003853 ORTHO05D004171 8.7e-14 80.9 140 40.7
QL03p070977 Quercus lobata HOM05D003853 ORTHO05D004171 1.5e-13 80.1 121 48.8
MSTRG.735 Avicennia marina HOM05D003853 ORTHO05D004171 1.9e-13 79.7 75 58.7
Rhsim03G0019300 Rhododendron simsii HOM05D003853 ORTHO05D004171 1.9e-13 79.7 94 53.2
Sc04g0007730 Simmondsia chinensis HOM05D003853 ORTHO05D004171 2.5e-13 79.3 128 43.8
Sopen05g007400 Solanum pennellii HOM05D003853 ORTHO05D004171 2.5e-13 79.3 95 50.5
Psat7g135200 Pisum sativum HOM05D003853 ORTHO05D004171 4.3e-13 78.6 146 41.1
Ah.02g126530 Amaranthus hybridus HOM05D003853 ORTHO05D004171 5.6e-13 78.2 73 60.3
AUR62003132 Chenopodium quinoa HOM05D003853 ORTHO05D004171 5.6e-13 78.2 83 49.4
Zm00001eb007060 Zea mays HOM05D003853 ORTHO05D004171 5.6e-13 78.2 115 45.2
SalBow2G1975 Salvia bowleyana HOM05D003853 ORTHO05D004171 7.3e-13 77.8 78 53.8
PSO017G6890 Papaver somniferum HOM05D003853 ORTHO05D004171 9.6e-13 77.4 80 57.5
Manes.01G030000 Manihot esculenta HOM05D003853 ORTHO05D004171 1.6e-12 76.6 92 46.7
SalBow2G1698 Salvia bowleyana HOM05D003853 ORTHO05D004171 1.6e-12 76.6 78 52.6
Migut.E00060 Erythranthe guttata HOM05D003853 ORTHO05D004171 2.1e-12 76.3 128 42.2
PSO478G4998 Papaver somniferum HOM05D003853 ORTHO05D004171 2.1e-12 76.3 92 53.3
Lsat_1_v5_gn_4_11980 Lactuca sativa HOM05D003853 ORTHO05D004171 2.8e-12 75.9 104 48.1
Sed0019389 Sechium edule HOM05D003853 ORTHO05D004171 2.8e-12 75.9 137 47.4
HanXRQChr10g0308121 Helianthus annuus HOM05D003853 ORTHO05D004171 3.6e-12 75.5 115 40.9
Actinidia28167 Actinidia chinensis HOM05D003853 ORTHO05D004171 4.8e-12 75.1 110 49.1
BcaC07g38710 Brassica carinata HOM05D003853 ORTHO05D004171 4.8e-12 75.1 98 51.0
MD13G1065700 Malus domestica HOM05D003853 ORTHO05D004171 4.8e-12 75.1 86 50.0
SEGI_33923 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 4.8e-12 75.1 133 45.9
AUR62003131 Chenopodium quinoa HOM05D003853 ORTHO05D004171 6.2e-12 74.7 137 38.0
C08p16400 Brassica napus HOM05D003853 ORTHO05D004171 8.1e-12 74.3 95 51.6
Psat7g135240 Pisum sativum HOM05D003853 ORTHO05D004171 8.1e-12 74.3 78 57.7
BolC8t49264H Brassica oleracea HOM05D003853 ORTHO05D004171 1.1e-11 73.9 95 51.6
AUR62007951 Chenopodium quinoa HOM05D003853 ORTHO05D004171 1.4e-11 73.6 123 43.9
Nitab4.5_0015741g0010 Nicotiana tabacum HOM05D003853 ORTHO05D004171 1.4e-11 73.6 83 48.2
vmacro22355 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 1.4e-11 73.6 130 43.8
Lalb_Chr17g0341041 Lupinus albus HOM05D003853 ORTHO05D004171 1.8e-11 73.2 108 44.4
TPR.G2267 Trifolium pratense HOM05D003853 ORTHO05D004171 1.8e-11 73.2 140 40.0
ECA246G1290 Erigeron canadensis HOM05D003853 ORTHO05D004171 3.1e-11 72.4 76 51.3
TPR.G34052 Trifolium pratense HOM05D003853 ORTHO05D004171 3.1e-11 72.4 117 42.7
Ah.03g139150 Amaranthus hybridus HOM05D003853 ORTHO05D004171 4.0e-11 72.0 121 43.0
Ca_18813_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 4.0e-11 72.0 129 41.1
Sopen05g007410 Solanum pennellii HOM05D003853 ORTHO05D004171 4.0e-11 72.0 77 48.1
vmacro22354 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 5.3e-11 71.6 84 53.6
FAN17G1589 Fragaria x ananassa HOM05D003853 ORTHO05D004171 6.9e-11 71.2 94 47.9
Medtr4g082860 Medicago truncatula HOM05D003853 ORTHO05D004171 6.9e-11 71.2 120 42.5
FAN12G3704 Fragaria x ananassa HOM05D002141 ORTHO05D002119 9.0e-11 70.9 106 45.3
A08p32170 Brassica napus HOM05D003853 ORTHO05D004171 1.2e-10 70.5 69 52.2
Lsat_1_v5_gn_3_56161 Lactuca sativa HOM05D003853 ORTHO05D004171 1.2e-10 70.5 87 47.1
Migut.L01216 Erythranthe guttata HOM05D003853 ORTHO05D004171 1.5e-10 70.1 97 44.3
CAN.G1340.8 Capsicum annuum HOM05D003853 ORTHO05D004171 2.0e-10 69.7 82 48.8
Medtr4g082830 Medicago truncatula HOM05D003853 ORTHO05D004171 2.0e-10 69.7 111 47.7
Prupe.1G282500 Prunus persica HOM05D003853 ORTHO05D004171 2.6e-10 69.3 130 40.8
vmacro22356 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 2.6e-10 69.3 96 47.9
MD16G1064200 Malus domestica HOM05D003853 ORTHO05D004171 3.4e-10 68.9 71 53.5
HPP92_023639 Vanilla planifolia HOM05D003853 ORTHO05D004171 4.4e-10 68.6 142 35.2
Solyc05g012570.3 Solanum lycopersicum HOM05D003853 ORTHO05D004171 5.8e-10 68.2 88 46.6
SEGI_07999 Sequoiadendron giganteum HOM05D003853 ORTHO05D004171 7.6e-10 67.8 117 46.2
TPR.G34063 Trifolium pratense HOM05D003853 ORTHO05D004171 9.9e-10 67.4 75 53.3
Peaxi162Scf00314g00031 Petunia axillaris HOM05D003853 ORTHO05D004171 1.3e-09 67.0 84 48.8
HanXRQChr15g0477051 Helianthus annuus HOM05D003853 ORTHO05D004171 1.7e-09 66.6 77 46.8
PGSC0003DMG400028384 Solanum tuberosum HOM05D003853 ORTHO05D004171 1.7e-09 66.6 92 44.6
CANSAT64G1198 Cannabis sativa HOM05D003853 ORTHO05D004171 2.2e-09 66.2 107 48.6
Os10g0330000 Oryza sativa ssp. japonica HOM05D003853 ORTHO05D004171 2.9e-09 65.9 72 50.0
HPP92_023625 Vanilla planifolia HOM05D003853 ORTHO05D004171 2.9e-09 65.9 146 33.6
BraA08t35141Z Brassica rapa HOM05D003853 ORTHO05D004171 3.8e-09 65.5 94 43.6
Lj2g0020869 Lotus japonicus HOM05D003853 ORTHO05D004171 4.9e-09 65.1 127 40.9
Ca_04944_v3 Cicer arietinum L. HOM05D003853 ORTHO05D004171 6.4e-09 64.7 107 41.1
Psat2g127960 Pisum sativum HOM05D003853 ORTHO05D004171 4.2e-08 62.0 116 44.8
vmacro22463 Vaccinium macrocarpon HOM05D003853 ORTHO05D004171 5.4e-08 61.6 73 54.8
Zm00001eb334140 Zea mays HOM05D003853 ORTHO05D004171 7.1e-08 61.2 84 42.9
THA.LOC104805946 Tarenaya hassleriana HOM05D003853 ORTHO05D004171 1.2e-07 60.5 81 44.4
Pp3c22_17930 Physcomitrium patens HOM05D030757 ORTHO05D004171 4.6e-07 58.5 87 41.4
Medtr5g043660 Medicago truncatula HOM05D003853 ORTHO05D004171 2.3e-06 56.2 94 41.5


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