Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 3.8e-64 248.1 129 100.0
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 1.1e-47 193.4 127 74.8
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 4.2e-47 191.4 127 78.0
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 8.0e-46 187.2 128 75.8
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 3.0e-45 185.3 126 73.8
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 1.5e-44 183.0 127 70.9
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.7e-43 178.3 127 72.4
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 4.8e-43 177.9 127 73.2
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 1.8e-42 176.0 127 69.3
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 1.8e-42 176.0 120 70.8
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 3.1e-42 175.3 127 72.4
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.2e-41 173.3 126 67.5
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 1.2e-41 173.3 127 70.1
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 1.6e-41 172.9 126 72.2
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 7.7e-41 170.6 126 70.6
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 7.7e-41 170.6 125 70.4
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 6.5e-40 167.5 128 64.1
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 6.5e-40 167.5 126 69.0
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 6.5e-40 167.5 128 66.4
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 1.9e-39 166.0 129 66.7
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 9.4e-39 163.7 126 67.5
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 9.4e-39 163.7 127 66.1
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.2e-38 163.3 128 64.1
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 1.6e-38 162.9 130 66.9
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 1.6e-38 162.9 129 66.7
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 2.1e-38 162.5 127 66.1
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 2.1e-38 162.5 127 65.4
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 4.7e-38 161.4 127 68.5
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 8.0e-38 160.6 127 65.4
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.0e-37 160.2 124 66.9
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.3e-37 159.1 124 64.5
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.0e-37 158.7 126 64.3
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 4.0e-37 158.3 127 63.8
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 6.8e-37 157.5 126 60.3
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.8e-37 157.5 126 60.3
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 6.8e-37 157.5 126 60.3
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 1.2e-36 156.8 130 60.8
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 2.0e-36 156.0 127 64.6
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 2.0e-36 156.0 124 66.9
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 2.6e-36 155.6 127 63.0
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 3.4e-36 155.2 129 64.3
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 5.7e-36 154.5 126 59.5
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 7.5e-36 154.1 127 62.2
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.3e-35 153.3 126 59.5
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.3e-35 153.3 126 60.3
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 1.3e-35 153.3 125 64.8
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 2.2e-35 152.5 127 61.4
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 6.3e-35 151.0 132 61.4
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 6.3e-35 151.0 132 61.4
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 8.3e-35 150.6 126 60.3
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 8.3e-35 150.6 127 62.2
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.8e-34 149.4 134 61.9
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 9.1e-34 147.1 125 60.0
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 1.2e-33 146.7 127 62.2
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.2e-33 146.7 127 61.4
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 1.2e-33 146.7 127 61.4
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 2.0e-33 146.0 127 58.3
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 2.0e-33 146.0 128 60.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 4.5e-33 144.8 124 59.7
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 5.9e-33 144.4 127 61.4
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 7.7e-33 144.1 127 60.6
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 7.7e-33 144.1 125 61.6
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 1.0e-32 143.7 124 61.3
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 1.0e-32 143.7 125 60.8
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 1.3e-32 143.3 127 57.5
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 2.3e-32 142.5 125 60.8
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 2.9e-32 142.1 128 60.2
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 8.6e-32 140.6 127 58.3
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 1.5e-31 139.8 127 56.7
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 2.5e-31 139.0 127 57.5
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 4.2e-31 138.3 128 55.5
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 1.2e-30 136.7 127 56.7
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 2.1e-30 136.0 127 54.3
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 2.1e-30 136.0 128 59.4
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 2.8e-30 135.6 127 55.1
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 2.8e-30 135.6 130 58.5
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 6.1e-30 134.4 131 60.3
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 6.1e-30 134.4 130 59.2
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 6.1e-30 134.4 125 59.2
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 8.0e-30 134.0 122 59.0
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.4e-29 133.3 130 53.1
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 2.3e-29 132.5 128 56.2
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 4.0e-29 131.7 131 58.8
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 5.2e-29 131.3 127 55.9
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 6.8e-29 131.0 124 51.6
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 1.2e-28 130.2 131 56.5
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 2.0e-28 129.4 125 54.4
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 2.6e-28 129.0 125 52.8
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 3.4e-28 128.6 125 52.8
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 3.4e-28 128.6 125 52.8
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 4.4e-28 128.3 125 53.6
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 4.4e-28 128.3 127 48.8
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 1.7e-27 126.3 125 52.8
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 2.2e-27 125.9 127 56.7
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 8.3e-27 124.0 128 52.3
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 8.3e-27 124.0 126 57.9
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 2.4e-26 122.5 120 51.7
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 4.1e-26 121.7 120 52.5
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 5.4e-26 121.3 127 56.7
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 5.4e-26 121.3 127 51.2
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 9.2e-26 120.6 127 56.7
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 4.3e-23 111.7 129 47.3
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 2.1e-22 109.4 140 43.6
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 4.7e-22 108.2 133 51.1
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 8.0e-22 107.5 127 45.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 1.8e-18 96.3 121 36.4
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 5.9e-17 91.3 53 83.0
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.2e-12 77.0 136 33.8
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 3.4e-12 75.5 78 55.1
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 4.4e-12 75.1 133 37.6
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 2.9e-11 72.4 103 39.8
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 3.2e-10 68.9 50 68.0
DCAR_030977 Daucus carota HOM05D000984 ORTHO05D007588 3.0e-08 62.4 100 35.0
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 8.6e-08 60.8 76 38.2
DCAR_030021 Daucus carota HOM05D000984 ORTHO05D007588 2.5e-07 59.3 98 31.6
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 7.3e-07 57.8 72 45.8
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 1.6e-06 56.6 73 38.4
DCAR_026623 Daucus carota HOM05D000984 ORTHO05D001096 2.1e-06 56.2 100 32.0
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 2.8e-06 55.8 72 47.2


User provided reference genes

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