Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P729T26 Lonicera japonica HOM05D000576 ORTHO05D013658 1.3e-51 206.1 102 100.0
Lj5A147T41 Lonicera japonica HOM05D000576 ORTHO05D000368 2.6e-15 85.5 102 49.0
Lj2A749T20 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-14 82.8 106 47.2
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 2.9e-14 82.0 102 50.0
Lj2A751T36 Lonicera japonica HOM05D000576 ORTHO05D000368 3.7e-14 81.6 106 46.2
Lj4A675G49 Lonicera japonica HOM05D000576 ORTHO05D000368 6.4e-14 80.9 105 45.7
Lj2A748G15 Lonicera japonica HOM05D000576 ORTHO05D025766 8.3e-14 80.5 102 43.1
Lj2C751G2 Lonicera japonica HOM05D000576 ORTHO05D000368 1.8e-13 79.3 102 44.1
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.7e-12 75.5 102 43.1
Lj5A109G69 Lonicera japonica HOM05D000576 ORTHO05D000368 6.0e-12 74.3 101 45.5
Lj1A1065T49 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-11 72.8 103 42.7
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 5.0e-11 71.2 108 42.6
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 5.0e-11 71.2 108 42.6
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 8.6e-11 70.5 102 42.2
Lj8A85G34 Lonicera japonica HOM05D000576 ORTHO05D000368 8.6e-11 70.5 103 42.7
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.3e-10 68.6 101 41.6
Lj5A569T31 Lonicera japonica HOM05D000576 ORTHO05D000368 2.8e-09 65.5 102 36.3
Lj3P850T49 Lonicera japonica HOM05D000576 ORTHO05D000368 8.0e-09 63.9 85 45.9
Lj5A97T93 Lonicera japonica HOM05D000576 ORTHO05D000368 8.0e-09 63.9 102 35.3
Dinv20101 Davidia involucrata HOM05D000576 ORTHO05D000368 1.8e-08 62.8 108 40.7
MD02G1120400 Malus domestica HOM05D000576 ORTHO05D000368 1.8e-08 62.8 90 46.7
Lj7A319T20 Lonicera japonica HOM05D000576 ORTHO05D000368 2.3e-08 62.4 102 35.3
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 3.1e-08 62.0 94 41.5
Lj7A332T19 Lonicera japonica HOM05D000576 ORTHO05D000368 3.1e-08 62.0 102 35.3
Lj7A334T37 Lonicera japonica HOM05D000576 ORTHO05D000368 3.1e-08 62.0 102 35.3
Prupe.1G496400 Prunus persica HOM05D000576 ORTHO05D000368 3.1e-08 62.0 102 36.3
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 3.1e-08 62.0 95 41.1
Lj1P555T10 Lonicera japonica HOM05D000576 ORTHO05D000368 4.0e-08 61.6 97 36.1
Lj9A566G48 Lonicera japonica HOM05D000576 ORTHO05D000368 5.2e-08 61.2 103 36.9
PGSC0003DMG402009486 Solanum tuberosum HOM05D000576 ORTHO05D000368 2.6e-07 58.9 100 34.0
Lj4A677G34 Lonicera japonica HOM05D000576 ORTHO05D000368 3.4e-07 58.5 85 41.2
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 3.4e-07 58.5 101 41.6
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.4e-07 58.5 82 37.8
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.4e-07 58.5 87 39.1
Dinv38537 Davidia involucrata HOM05D000111 ORTHO05D000134 4.4e-07 58.2 83 44.6
vmacro18523 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 4.4e-07 58.2 83 41.0
Lj4A510T17 Lonicera japonica HOM05D000576 ORTHO05D000368 5.8e-07 57.8 91 42.9
Lj4C517T4 Lonicera japonica HOM05D000576 ORTHO05D000368 5.8e-07 57.8 91 42.9
MD02G1120500 Malus domestica HOM05D000576 ORTHO05D000368 5.8e-07 57.8 93 41.9
Prupe.1G495700 Prunus persica HOM05D000576 ORTHO05D000368 5.8e-07 57.8 85 37.6
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.8e-07 57.8 96 36.5
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 7.5e-07 57.4 97 41.2
Dinv38540 Davidia involucrata HOM05D000576 ORTHO05D013658 9.8e-07 57.0 79 45.6
Lj9A565T43 Lonicera japonica HOM05D000576 ORTHO05D000368 9.8e-07 57.0 103 34.0
Lj9A566T51 Lonicera japonica HOM05D000576 ORTHO05D000368 1.3e-06 56.6 103 35.9
QL04p071108 Quercus lobata HOM05D000576 ORTHO05D000368 1.3e-06 56.6 100 41.0
QL10p005844 Quercus lobata HOM05D021695 ORTHO05D013658 1.3e-06 56.6 97 35.1
TWI63G1205 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.7e-06 56.2 101 39.6
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 2.2e-06 55.8 104 37.5
Lj5A109G71 Lonicera japonica HOM05D000576 ORTHO05D000368 2.9e-06 55.5 82 41.5
QL04p071180 Quercus lobata HOM05D000576 ORTHO05D000368 2.9e-06 55.5 100 40.0
Ah.08g220280 Amaranthus hybridus HOM05D000576 ORTHO05D000368 3.7e-06 55.1 89 38.2
Hma1.2p1_0418F.1_g149130 Hydrangea macrophylla HOM05D021695 ORTHO05D013658 4.9e-06 54.7 83 41.0
Phvul.003G209900 Phaseolus vulgaris HOM05D000576 ORTHO05D000368 4.9e-06 54.7 93 40.9
QL03p058059 Quercus lobata HOM05D000576 ORTHO05D000368 4.9e-06 54.7 86 38.4
TWI63G1780 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.9e-06 54.7 56 48.2
TWI63G0014 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 6.4e-06 54.3 96 40.6


User provided reference genes

Program Settings