Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 2.9e-108 395.2 197 100.0
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 6.8e-97 357.5 182 96.2
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 6.4e-87 324.3 198 76.3
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 6.4e-87 324.3 198 76.8
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.4e-86 323.2 196 77.0
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 1.4e-86 323.2 197 79.2
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.4e-86 322.4 198 75.8
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 3.2e-86 322.0 197 76.6
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 4.1e-86 321.6 196 75.5
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 7.0e-86 320.9 198 75.8
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 1.2e-85 320.1 196 77.0
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 2.1e-85 319.3 198 76.8
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 2.1e-85 319.3 198 75.3
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 2.7e-85 318.9 198 74.2
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 3.5e-85 318.5 196 76.5
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 3.5e-85 318.5 197 76.1
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 3.5e-85 318.5 197 75.6
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 6.0e-85 317.8 197 77.7
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 1.3e-84 316.6 198 73.2
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 2.3e-84 315.8 198 74.2
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 3.0e-84 315.5 198 74.7
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 5.1e-84 314.7 198 72.7
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 6.6e-84 314.3 198 73.7
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 6.6e-84 314.3 195 76.4
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 6.6e-84 314.3 197 75.1
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.1e-83 313.5 198 71.2
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 2.5e-83 312.4 198 72.2
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 2.5e-83 312.4 198 73.7
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 5.6e-83 311.2 198 70.7
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 5.6e-83 311.2 197 73.1
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.6e-82 309.7 198 74.2
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 2.8e-82 308.9 198 72.7
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 8.1e-82 307.4 198 73.2
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 1.1e-81 307.0 198 73.7
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.1e-81 307.0 197 73.1
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 5.2e-81 304.7 198 72.2
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 5.2e-81 304.7 197 72.6
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 6.8e-81 304.3 198 71.7
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 6.8e-81 304.3 198 69.2
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 1.5e-80 303.1 198 72.7
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 2.0e-80 302.8 183 77.0
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 2.6e-80 302.4 198 71.7
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 3.4e-80 302.0 198 73.7
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 5.8e-80 301.2 198 72.2
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 7.5e-80 300.8 197 72.1
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 7.5e-80 300.8 183 78.7
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 7.5e-80 300.8 196 71.4
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 7.5e-80 300.8 197 72.6
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 9.9e-80 300.4 198 70.2
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 9.9e-80 300.4 196 70.9
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.3e-79 300.1 198 70.2
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 1.3e-79 300.1 198 70.7
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 1.7e-79 299.7 194 73.7
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 2.2e-79 299.3 196 70.4
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 2.9e-79 298.9 189 74.6
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 2.9e-79 298.9 198 70.2
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 1.9e-78 296.2 198 69.2
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 1.9e-78 296.2 198 70.7
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 2.4e-78 295.8 198 70.7
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 5.4e-78 294.7 197 69.5
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 5.4e-78 294.7 198 69.2
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.6e-77 293.1 197 70.1
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.6e-77 293.1 196 71.4
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 72.2
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 2.7e-77 292.4 198 69.7
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 3.5e-77 292.0 198 68.2
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 3.5e-77 292.0 196 66.8
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 4.6e-77 291.6 197 68.0
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 4.6e-77 291.6 198 70.2
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 7.8e-77 290.8 197 70.1
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 7.8e-77 290.8 198 68.2
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 7.8e-77 290.8 197 69.5
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 1.3e-76 290.0 198 71.7
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 1.7e-76 289.7 198 67.7
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 3.0e-76 288.9 191 72.3
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 5.1e-76 288.1 198 66.7
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 6.6e-76 287.7 197 69.5
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 8.6e-76 287.3 197 68.5
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 1.1e-75 287.0 186 73.7
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 1.1e-75 287.0 198 67.7
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.5e-75 286.6 198 68.7
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 1.5e-75 286.6 199 68.8
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.9e-75 286.2 198 68.2
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 3.3e-75 285.4 198 68.2
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 4.3e-75 285.0 198 68.7
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.6e-75 284.6 198 69.2
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 5.6e-75 284.6 198 68.7
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 9.6e-75 283.9 198 67.2
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.6e-74 283.1 199 68.8
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 4.7e-74 281.6 182 72.5
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 67.7
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 67.7
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 6.2e-74 281.2 191 68.6
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 6.2e-74 281.2 186 72.0
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 6.2e-74 281.2 184 70.1
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 6.2e-74 281.2 198 68.7
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 8.1e-74 280.8 199 67.3
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 8.1e-74 280.8 198 67.7
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.1e-73 280.4 198 67.2
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 1.8e-73 279.6 187 71.7
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 3.1e-73 278.9 184 70.1
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 3.1e-73 278.9 184 70.1
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 3.1e-73 278.9 198 63.6
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 6.8e-73 277.7 198 65.7
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 1.5e-72 276.6 198 68.2
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 1.5e-72 276.6 198 66.7
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 5.8e-72 274.6 195 67.2
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 9.9e-72 273.9 196 65.8
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 1.3e-71 273.5 192 69.3
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 2.9e-71 272.3 198 64.6
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 2.9e-71 272.3 186 71.0
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 1.9e-70 269.6 191 68.1
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 3.2e-70 268.9 198 66.2
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 6.6e-68 261.2 182 67.0
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 1.5e-67 260.0 198 62.6
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 4.3e-67 258.5 178 68.0
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 1.4e-65 253.4 196 64.3
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 4.0e-65 251.9 189 64.0
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 1.5e-64 250.0 195 61.0
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 2.2e-63 246.1 144 79.9
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 4.6e-61 238.4 170 68.8
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 4.3e-59 231.9 144 67.4
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.6e-59 231.5 143 72.0
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 3.6e-58 228.8 155 70.3
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 3.1e-57 225.7 187 57.2
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 3.4e-56 222.2 169 63.3
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 9.9e-56 220.7 192 56.8
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 1.4e-54 216.9 197 56.9
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 3.5e-53 212.2 144 62.5
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 3.0e-52 209.1 156 62.8
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 1.4e-49 200.3 114 75.4
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 6.9e-49 198.0 197 50.3
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 3.7e-42 175.6 98 74.5
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 4.8e-42 175.3 198 48.5
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 2.4e-41 172.9 198 49.0
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 1.3e-39 167.2 125 67.2
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 1.9e-38 163.3 187 44.9
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 2.3e-36 156.4 182 47.8
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 3.1e-33 146.0 180 42.8
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 4.8e-26 122.1 107 54.2
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 2.6e-24 116.3 74 64.9
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 2.2e-23 113.2 184 35.9
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.8e-23 112.5 85 61.2
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 2.1e-21 106.7 112 48.2
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 4.7e-21 105.5 120 45.8
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.8e-20 103.6 114 48.2
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.5e-19 100.5 194 38.7
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 4.4e-19 99.0 64 62.5
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 1.1e-17 94.4 71 59.2
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.8e-15 85.9 58 70.7
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 7.7e-08 61.6 43 69.8


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