Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P694T44 Lonicera japonica HOM05D007162 ORTHO05D007631 1.4e-141 506.1 241 100.0
DCAR_023374 Daucus carota HOM05D007162 ORTHO05D007631 4.1e-112 408.3 241 77.6
Lj3P834T54 Lonicera japonica HOM05D007162 ORTHO05D007631 4.1e-112 408.3 239 79.5
Oeu046586.1 Olea europaea HOM05D007162 ORTHO05D007631 5.4e-112 407.9 241 77.2
MSTRG.10171 Avicennia marina HOM05D007162 ORTHO05D007631 9.2e-112 407.1 241 75.1
Rhsim04G0242300 Rhododendron simsii HOM05D007162 ORTHO05D007631 2.9e-110 402.1 239 76.6
Nitab4.5_0002150g0050 Nicotiana tabacum HOM05D007162 ORTHO05D007631 5.6e-109 397.9 241 73.0
Actinidia18474 Actinidia chinensis HOM05D007162 ORTHO05D007631 4.7e-108 394.8 239 74.9
Hma1.2p1_0013F.1_g008260 Hydrangea macrophylla HOM05D007162 ORTHO05D007631 1.0e-107 393.7 240 75.0
Prupe.1G112700 Prunus persica HOM05D007162 ORTHO05D007631 4.0e-107 391.7 241 73.0
Cfa015679 Carpinus fangiana HOM05D007162 ORTHO05D007631 1.2e-106 390.2 242 74.8
PGR031G2441 Punica granatum HOM05D007162 ORTHO05D007631 2.0e-106 389.4 241 74.3
vmacro07965 Vaccinium macrocarpon HOM05D007162 ORTHO05D007631 2.0e-106 389.4 241 73.4
Duzib151G0437 Durio zibethinus HOM05D007162 ORTHO05D007631 2.6e-106 389.0 239 74.1
PGSC0003DMG400004614 Solanum tuberosum HOM05D007162 ORTHO05D007631 3.4e-106 388.7 241 71.4
Manes.03G207900 Manihot esculenta HOM05D007162 ORTHO05D007631 9.8e-106 387.1 241 74.7
CiPaw.01G134400 Carya illinoinensis HOM05D007162 ORTHO05D007631 1.3e-105 386.7 241 75.1
Gohir.D10G181300 Gossypium hirsutum HOM05D007162 ORTHO05D007631 1.7e-105 386.3 237 73.4
Gorai.011G202800 Gossypium raimondii HOM05D007162 ORTHO05D007631 1.7e-105 386.3 237 73.4
Gohir.A10G174800 Gossypium hirsutum HOM05D007162 ORTHO05D007631 2.2e-105 386.0 237 73.0
Peaxi162Scf01160g00150 Petunia axillaris HOM05D007162 ORTHO05D007631 2.2e-105 386.0 241 71.4
Duzib212G0788 Durio zibethinus HOM05D007162 ORTHO05D007631 8.3e-105 384.0 239 72.8
Hma1.2p1_0516F.1_g170520 Hydrangea macrophylla HOM05D007162 ORTHO05D007631 8.3e-105 384.0 243 74.1
Sopen12g033850 Solanum pennellii HOM05D007162 ORTHO05D007631 8.3e-105 384.0 241 69.7
Thecc.04G306200 Theobroma cacao HOM05D007162 ORTHO05D007631 2.4e-104 382.5 239 72.0
RcHm_v2.0_Chr4g0426111 Rosa chinensis HOM05D007162 ORTHO05D007631 4.1e-104 381.7 242 72.3
COL.COLO4_34567 Corchorus olitorius HOM05D007162 ORTHO05D007631 7.0e-104 380.9 239 72.0
CAN.G484.72 Capsicum annuum HOM05D007162 ORTHO05D007631 2.7e-103 379.0 241 70.5
SGA_v2.0_scaffold157G37347 Striga asiatica HOM05D007162 ORTHO05D007631 4.6e-103 378.3 239 70.7
FAN07G2689 Fragaria x ananassa HOM05D007162 ORTHO05D007631 7.8e-103 377.5 242 71.5
Potri.010G149000 Populus trichocarpa HOM05D007162 ORTHO05D007631 7.8e-103 377.5 241 72.6
QL06p013113 Quercus lobata HOM05D007162 ORTHO05D007631 7.8e-103 377.5 240 72.9
CANSAT78G1184 Cannabis sativa HOM05D007162 ORTHO05D007631 2.3e-102 375.9 242 72.3
FvH4_4g20690 Fragaria vesca HOM05D007162 ORTHO05D007631 3.9e-102 375.2 242 70.7
Sabra10G0115000 Salix brachista HOM05D007162 ORTHO05D007631 8.6e-102 374.0 241 72.2
Ca_00957_v3 Cicer arietinum L. HOM05D007162 ORTHO05D007631 1.9e-101 372.9 241 71.8
Phvul.006G120400 Phaseolus vulgaris HOM05D007162 ORTHO05D007631 1.9e-101 372.9 241 71.0
Lsat_1_v5_gn_1_40801 Lactuca sativa HOM05D007162 ORTHO05D007631 5.6e-101 371.3 244 70.5
VMungo0540G1379 Vigna mungo HOM05D007162 ORTHO05D007631 7.3e-101 370.9 241 70.5
Atru.chr4.3114 Acer truncatum HOM05D007162 ORTHO05D007631 9.5e-101 370.5 241 71.4
Medtr2g033410 Medicago truncatula HOM05D007162 ORTHO05D007631 2.1e-100 369.4 241 71.8
TPR.G33885 Trifolium pratense HOM05D007162 ORTHO05D007631 2.8e-100 369.0 241 71.4
FAN12G3043 Fragaria x ananassa HOM05D007162 ORTHO05D007631 3.6e-100 368.6 242 71.1
Psat1g162520 Pisum sativum HOM05D007162 ORTHO05D007631 8.0e-100 367.5 241 71.4
Eucgr.B03982 Eucalyptus grandis HOM05D007162 ORTHO05D007631 1.4e-99 366.7 239 69.9
MD13G1148700 Malus domestica HOM05D007162 ORTHO05D007631 2.3e-99 365.9 241 70.1
TWI09G0041 Tripterygium wilfordii HOM05D007162 ORTHO05D007631 6.8e-99 364.4 238 71.0
Glyma.09G032600 Glycine max HOM05D007162 ORTHO05D007631 1.2e-98 363.6 241 68.9
Nitab4.5_0002294g0120 Nicotiana tabacum HOM05D007162 ORTHO05D007631 1.2e-98 363.6 225 72.0
Lalb_Chr15g0089091 Lupinus albus HOM05D007162 ORTHO05D007631 2.0e-98 362.8 239 69.9
Glyma.15G137700 Glycine max HOM05D007162 ORTHO05D007631 4.4e-98 361.7 241 69.3
THA.LOC104818869 Tarenaya hassleriana HOM05D007162 ORTHO05D007631 7.5e-98 360.9 241 68.5
Lj6g0014268 Lotus japonicus HOM05D007162 ORTHO05D007631 2.2e-97 359.4 239 69.0
Ciclev10005014m.g Citrus clementina HOM05D007162 ORTHO05D007631 3.7e-97 358.6 242 71.1
Migut.G00033 Erythranthe guttata HOM05D007162 ORTHO05D007631 8.3e-97 357.5 242 69.0
Lalb_Chr18g0058531 Lupinus albus HOM05D007162 ORTHO05D007631 2.4e-96 355.9 241 69.3
AT5G49610 Arabidopsis thaliana HOM05D007162 ORTHO05D007631 7.0e-96 354.4 243 67.1
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 7.0e-96 354.4 242 68.2
MD16G1149000 Malus domestica HOM05D007162 ORTHO05D007631 9.2e-96 354.0 236 69.9
SalBow8G4721 Salvia bowleyana HOM05D007162 ORTHO05D007631 1.2e-95 353.6 238 68.1
EL10Ac3g05554 Beta vulgaris HOM05D007162 ORTHO05D007631 1.6e-95 353.2 242 66.5
AL8G23420 Arabidopsis lyrata HOM05D007162 ORTHO05D007631 2.0e-95 352.8 242 66.9
Carub.0008s0947 Capsella rubella HOM05D007162 ORTHO05D007631 3.5e-95 352.1 243 66.7
Nn4g25520 Nelumbo nucifera HOM05D007162 ORTHO05D007631 7.8e-95 350.9 240 65.8
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 3.0e-94 349.0 242 66.1
Lalb_Chr20g0120651 Lupinus albus HOM05D007162 ORTHO05D007631 5.0e-94 348.2 241 66.0
Thhalv10004464m.g Eutrema salsugineum HOM05D007162 ORTHO05D007631 8.6e-94 347.4 242 66.1
AUR62032769 Chenopodium quinoa HOM05D007162 ORTHO05D007631 1.9e-93 346.3 242 64.9
BolC2t11828H Brassica oleracea HOM05D007162 ORTHO05D007631 1.2e-92 343.6 241 65.1
AUR62032772 Chenopodium quinoa HOM05D007162 ORTHO05D007631 1.2e-92 343.6 240 65.0
Sp2g19920 Schrenkiella parvula HOM05D007162 ORTHO05D007631 1.2e-92 343.6 240 65.0
Aa31LG11G8430 Aethionema arabicum HOM05D007162 ORTHO05D007631 3.6e-92 342.0 236 66.1
BraA02t08804Z Brassica rapa HOM05D007162 ORTHO05D007631 6.2e-92 341.3 243 64.2
PSO170G0624 Papaver somniferum HOM05D007162 ORTHO05D007631 1.8e-91 339.7 239 64.0
BcaC03g17742 Brassica carinata HOM05D007162 ORTHO05D007631 2.3e-91 339.3 241 64.7
Sc13g0007060 Simmondsia chinensis HOM05D007162 ORTHO05D007631 2.3e-91 339.3 240 65.0
C02p57550 Brassica napus HOM05D007162 ORTHO05D007631 2.6e-90 335.9 241 64.3
Gorai.002G031500 Gossypium raimondii HOM05D007162 ORTHO05D007631 3.4e-90 335.5 240 64.6
A02p38240 Brassica napus HOM05D007162 ORTHO05D007631 4.4e-90 335.1 243 63.8
Aqoxy2G02919 Aquilegia oxysepala HOM05D007162 ORTHO05D007631 7.5e-90 334.3 240 65.0
Gohir.A01G035600 Gossypium hirsutum HOM05D007162 ORTHO05D007631 1.3e-89 333.6 240 63.8
Gohir.D01G023577 Gossypium hirsutum HOM05D007162 ORTHO05D007631 2.9e-89 332.4 240 64.2
unitig_0.g2579 Utricularia gibba HOM05D007162 ORTHO05D007631 3.5e-87 325.5 238 62.2
Sabra08G0077100 Salix brachista HOM05D006827 ORTHO05D007631 5.1e-86 321.6 216 68.5
CSS0000127 Camellia sinensis var. sinensis HOM05D007162 ORTHO05D007631 2.8e-84 315.8 192 74.5
CSS0043507 Camellia sinensis var. sinensis HOM05D007162 ORTHO05D007631 2.8e-84 315.8 192 74.5
Haze_00858 Corylus avellana HOM05D007162 ORTHO05D007631 8.6e-78 294.3 201 69.2
BcaB07g34165 Brassica carinata HOM05D007162 ORTHO05D007631 4.4e-74 282.0 204 64.7
Oeu004105.1 Olea europaea HOM05D007162 ORTHO05D007631 9.9e-74 280.8 219 63.0
MBI19_g03280_MAGBIO Magnolia biondii HOM05D002153 ORTHO05D002137 4.2e-72 275.4 222 57.7
HPP92_017256 Vanilla planifolia HOM05D007162 ORTHO05D007631 5.1e-70 268.5 240 52.5
ATR0693G387 Amborella trichopoda HOM05D007162 ORTHO05D007631 3.3e-69 265.8 237 52.3
Solyc12g099170.3 Solanum lycopersicum HOM05D007162 ORTHO05D007631 7.6e-66 254.6 165 67.9
HanXRQChr11g0353911 Helianthus annuus HOM05D007162 ORTHO05D007631 3.3e-61 239.2 182 64.3
Cc03_g00510 Coffea canephora HOM05D007162 ORTHO05D007631 6.2e-60 235.0 241 51.9
Dinv15135 Davidia involucrata HOM05D007162 ORTHO05D007631 5.6e-53 211.8 141 70.2
GSVIVG01034950001 Vitis vinifera HOM05D007162 ORTHO05D007631 6.5e-49 198.4 136 67.6
TAR362G1081 Trochodendron aralioides HOM05D007162 ORTHO05D007631 5.3e-43 178.7 112 72.3
AUR62022433 Chenopodium quinoa HOM05D007162 ORTHO05D007631 4.2e-40 169.1 125 61.6
Ah.07g201630 Amaranthus hybridus HOM05D007162 ORTHO05D007631 6.1e-39 165.2 171 45.6
QL12p005934 Quercus lobata HOM05D007162 ORTHO05D007631 3.7e-28 129.4 83 67.5
Potri.008G038000 Populus trichocarpa HOM05D003814 ORTHO05D004399 3.1e-11 73.2 131 29.0
TAR624G1176 Trochodendron aralioides HOM05D003814 ORTHO05D004399 5.9e-10 68.9 123 26.0
TAR624G0077 Trochodendron aralioides HOM05D003814 ORTHO05D004399 1.3e-09 67.8 122 25.4
ECA238G0023 Erigeron canadensis HOM05D012740 ORTHO05D010577 1.5e-08 64.3 160 28.1
Aqoxy5G02065 Aquilegia oxysepala HOM05D003814 ORTHO05D004399 2.5e-08 63.5 117 25.6
Potri.008G214000 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.1e-07 60.5 155 24.5
TAR371G0827 Trochodendron aralioides HOM05D002420 ORTHO05D002422 8.0e-07 58.5 179 22.3
Potri.017G066400 Populus trichocarpa HOM05D003814 ORTHO05D004399 2.3e-06 57.0 155 23.2
Thecc.06G118300 Theobroma cacao HOM05D003814 ORTHO05D004399 2.3e-06 57.0 119 24.4


User provided reference genes

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