Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 5.2e-81 304.3 151 100.0
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 3.1e-41 172.2 170 55.3
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 3.0e-36 155.6 90 86.7
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.1e-35 153.7 156 51.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 4.3e-35 151.8 91 81.3
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 7.4e-35 151.0 91 82.4
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.3e-34 150.2 91 80.2
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 2.8e-34 149.1 91 80.2
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 4.8e-34 148.3 91 79.1
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.4e-33 146.7 91 80.2
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 2.4e-33 146.0 91 76.9
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 3.1e-33 145.6 91 75.8
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 3.1e-33 145.6 91 76.9
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.1e-33 145.2 91 78.0
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 4.1e-33 145.2 91 78.0
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 5.3e-33 144.8 91 74.7
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 5.3e-33 144.8 91 76.9
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 5.3e-33 144.8 91 78.0
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 6.9e-33 144.4 91 76.9
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 9.1e-33 144.1 89 77.5
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 9.1e-33 144.1 91 75.8
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.2e-32 143.7 91 76.9
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 1.2e-32 143.7 91 74.7
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 1.2e-32 143.7 90 75.6
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.5e-32 143.3 91 75.8
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.5e-32 143.3 91 75.8
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.5e-32 143.3 91 75.8
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.5e-32 143.3 91 74.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 1.5e-32 143.3 91 74.7
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.0e-32 142.9 91 74.7
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.0e-32 142.9 91 75.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 2.0e-32 142.9 91 73.6
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 2.6e-32 142.5 89 77.5
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 2.6e-32 142.5 91 75.8
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 3.4e-32 142.1 91 74.7
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 3.4e-32 142.1 91 74.7
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 4.5e-32 141.7 91 74.7
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.5e-32 141.7 91 76.9
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 5.9e-32 141.4 91 74.7
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 5.9e-32 141.4 91 72.5
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 5.9e-32 141.4 91 73.6
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 5.9e-32 141.4 91 73.6
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 7.7e-32 141.0 91 71.4
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 7.7e-32 141.0 91 71.4
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 7.7e-32 141.0 91 73.6
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.0e-31 140.6 91 73.6
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.3e-31 140.2 91 75.8
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.7e-31 139.8 91 72.5
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.2e-31 139.4 91 73.6
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.2e-31 139.4 91 75.8
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 5.0e-31 138.3 91 73.6
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 5.0e-31 138.3 85 80.0
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 5.0e-31 138.3 91 72.5
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 5.0e-31 138.3 91 72.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 6.5e-31 137.9 91 72.5
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 8.5e-31 137.5 91 72.5
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 8.5e-31 137.5 91 72.5
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 8.5e-31 137.5 91 72.5
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 8.5e-31 137.5 91 72.5
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.1e-30 137.1 91 72.5
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.1e-30 137.1 91 71.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 1.1e-30 137.1 91 70.3
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.1e-30 137.1 91 71.4
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 1.1e-30 137.1 91 71.4
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 1.4e-30 136.7 91 70.3
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.4e-30 136.7 91 72.5
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 1.4e-30 136.7 91 72.5
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 1.4e-30 136.7 90 71.1
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 1.9e-30 136.3 91 71.4
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 2.5e-30 136.0 91 70.3
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 2.5e-30 136.0 90 72.2
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 4.2e-30 135.2 91 71.4
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 5.5e-30 134.8 91 69.2
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 5.5e-30 134.8 91 73.6
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 5.5e-30 134.8 91 73.6
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 5.5e-30 134.8 178 44.9
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 5.5e-30 134.8 91 69.2
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 7.2e-30 134.4 91 70.3
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 7.2e-30 134.4 91 70.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 1.2e-29 133.7 98 67.3
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.6e-29 133.3 90 71.1
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.6e-29 133.3 91 70.3
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 2.7e-29 132.5 90 71.1
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 3.6e-29 132.1 100 66.0
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 3.6e-29 132.1 91 70.3
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 3.6e-29 132.1 91 69.2
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 3.6e-29 132.1 90 71.1
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 4.6e-29 131.7 84 76.2
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 6.1e-29 131.3 89 70.8
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 6.1e-29 131.3 87 72.4
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 5.1e-28 128.3 89 73.0
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 6.7e-28 127.9 88 72.7
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-27 126.7 86 70.9
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 2.0e-27 126.3 81 76.5
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 6.3e-26 121.3 91 61.5
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 8.2e-26 120.9 66 87.9
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 5.9e-24 114.8 90 58.9
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 7.7e-24 114.4 91 61.5
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.0e-23 114.0 91 60.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-23 112.8 81 66.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.2e-23 112.8 81 66.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 6.5e-23 111.3 90 61.1
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 3.2e-22 109.0 99 53.5
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.0e-20 104.0 123 50.4
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.8e-20 103.2 91 58.2
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 2.3e-20 102.8 88 56.8
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 3.7e-18 95.5 91 51.6
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.3e-11 72.4 69 56.5
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 9.7e-11 70.9 57 61.4
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.3e-10 70.5 42 76.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 1.3e-10 70.5 77 51.9
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.4e-09 66.2 121 34.7
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.0e-08 63.2 60 58.3


User provided reference genes

Program Settings