Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P597T84 Lonicera japonica HOM05D005221 ORTHO05D006355 1.1e-79 300.1 161 100.0
Dinv38425 Davidia involucrata HOM05D005221 ORTHO05D006355 2.8e-40 169.1 166 63.3
QL06p003360 Quercus lobata HOM05D005221 ORTHO05D006355 2.8e-40 169.1 167 59.9
Aqoxy2G03348 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 1.2e-38 163.7 174 56.3
Potri.010G090700 Populus trichocarpa HOM05D005221 ORTHO05D006355 1.2e-38 163.7 171 59.1
Potri.008G150300 Populus trichocarpa HOM05D005221 ORTHO05D006355 2.6e-38 162.5 171 58.5
Thecc.04G227300 Theobroma cacao HOM05D005221 ORTHO05D006355 3.4e-38 162.2 168 59.5
Duzib151G0158 Durio zibethinus HOM05D005221 ORTHO05D006355 4.5e-38 161.8 170 58.8
Oeu037551.1 Olea europaea HOM05D005221 ORTHO05D006355 5.8e-38 161.4 172 54.7
MD16G1188800 Malus domestica HOM05D005221 ORTHO05D006355 7.6e-38 161.0 168 59.5
Cc03_g03470 Coffea canephora HOM05D005221 ORTHO05D006355 1.0e-37 160.6 174 56.3
Oeu029026.1 Olea europaea HOM05D005221 ORTHO05D006355 1.7e-37 159.8 166 51.8
Cfa015617 Carpinus fangiana HOM05D005221 ORTHO05D006355 2.2e-37 159.5 169 59.2
COL.COLO4_06196 Corchorus olitorius HOM05D005221 ORTHO05D006355 2.2e-37 159.5 165 58.2
Ca_10924_v3 Cicer arietinum L. HOM05D005221 ORTHO05D006355 3.8e-37 158.7 178 54.5
Sabra08G0114400 Salix brachista HOM05D005221 ORTHO05D006355 3.8e-37 158.7 171 57.9
Cpa.g.sc8.322 Carica papaya HOM05D005221 ORTHO05D006355 6.5e-37 157.9 177 58.2
Lj3P740T18 Lonicera japonica HOM05D005221 ORTHO05D006355 6.5e-37 157.9 172 57.0
Manes.03G181200 Manihot esculenta HOM05D005221 ORTHO05D006355 8.4e-37 157.5 168 57.1
TAR362G0899 Trochodendron aralioides HOM05D005221 ORTHO05D006355 8.4e-37 157.5 171 57.3
Sed0008919 Sechium edule HOM05D005221 ORTHO05D006355 1.4e-36 156.8 173 57.2
FAN22G0945 Fragaria x ananassa HOM05D005221 ORTHO05D006355 3.2e-36 155.6 170 56.5
CSS0023930 Camellia sinensis var. sinensis HOM05D005221 ORTHO05D006355 4.2e-36 155.2 171 53.2
FAN12G4146 Fragaria x ananassa HOM05D005221 ORTHO05D006355 4.2e-36 155.2 171 56.7
FAN07G2107 Fragaria x ananassa HOM05D005221 ORTHO05D006355 5.5e-36 154.8 170 56.5
Nn4g26263 Nelumbo nucifera HOM05D005221 ORTHO05D006355 5.5e-36 154.8 177 54.8
TWI53G0458 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 9.3e-36 154.1 168 55.4
FvH4_4g15060 Fragaria vesca HOM05D005221 ORTHO05D006355 1.2e-35 153.7 169 56.2
MSTRG.21844 Avicennia marina HOM05D005221 ORTHO05D006355 1.6e-35 153.3 169 55.0
Duzib212G0790 Durio zibethinus HOM05D005221 ORTHO05D006355 1.6e-35 153.3 167 56.3
TWI09G0254 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 2.7e-35 152.5 169 55.6
Lj5g0028012 Lotus japonicus HOM05D005221 ORTHO05D006355 4.6e-35 151.8 177 53.7
RcHm_v2.0_Chr4g0416801 Rosa chinensis HOM05D005221 ORTHO05D006355 6.0e-35 151.4 169 52.1
TPR.G5529 Trifolium pratense HOM05D005221 ORTHO05D006355 6.0e-35 151.4 175 53.1
Sabra10G0052800 Salix brachista HOM05D005221 ORTHO05D006355 7.9e-35 151.0 170 55.3
MD13G1188400 Malus domestica HOM05D005221 ORTHO05D006355 1.0e-34 150.6 164 52.4
Rhsim04G0205100 Rhododendron simsii HOM05D005221 ORTHO05D006355 1.3e-34 150.2 173 56.1
Peaxi162Scf00437g00052 Petunia axillaris HOM05D005221 ORTHO05D006355 1.8e-34 149.8 177 52.5
Actinidia23488 Actinidia chinensis HOM05D005221 ORTHO05D006355 3.9e-34 148.7 172 51.7
Manes.15G026700 Manihot esculenta HOM05D005221 ORTHO05D006355 3.9e-34 148.7 172 57.6
Nitab4.5_0001545g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 3.9e-34 148.7 176 52.8
Peaxi162Scf00642g00022 Petunia axillaris HOM05D005221 ORTHO05D006355 3.9e-34 148.7 169 54.4
Nitab4.5_0000260g0100 Nicotiana tabacum HOM05D005221 ORTHO05D006355 5.1e-34 148.3 170 51.8
Duzib052G0196 Durio zibethinus HOM05D005221 ORTHO05D006355 8.7e-34 147.5 169 52.7
ECA234G2268 Erigeron canadensis HOM05D005221 ORTHO05D006355 1.9e-33 146.4 168 56.5
Sed0012211 Sechium edule HOM05D005221 ORTHO05D006355 1.9e-33 146.4 176 53.4
Medtr1g104840 Medicago truncatula HOM05D005221 ORTHO05D006355 4.3e-33 145.2 169 53.8
Solyc06g054280.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 4.3e-33 145.2 168 54.8
Sopen06g019400 Solanum pennellii HOM05D005221 ORTHO05D006355 4.3e-33 145.2 171 51.5
MELO3C014491.2 Cucumis melo HOM05D005221 ORTHO05D006355 7.4e-33 144.4 178 52.8
Prupe.1G155500 Prunus persica HOM05D005221 ORTHO05D006355 7.4e-33 144.4 168 53.6
HanXRQChr04g0110301 Helianthus annuus HOM05D005221 ORTHO05D006355 1.3e-32 143.7 158 57.6
ClCG06G006000 Citrullus lanatus HOM05D005221 ORTHO05D006355 2.2e-32 142.9 179 52.5
Ciclev10005615m.g Citrus clementina HOM05D005221 ORTHO05D006355 2.2e-32 142.9 185 51.9
Sc13g0004240 Simmondsia chinensis HOM05D005221 ORTHO05D006355 2.2e-32 142.9 187 51.9
PGSC0003DMG400011822 Solanum tuberosum HOM05D005221 ORTHO05D006355 2.8e-32 142.5 174 50.6
CAN.G873.5 Capsicum annuum HOM05D005221 ORTHO05D006355 3.7e-32 142.1 169 53.8
DCAR_030618 Daucus carota HOM05D005221 ORTHO05D006355 4.8e-32 141.7 165 52.1
THA.LOC104802759 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 8.2e-32 141.0 173 53.8
DCAR_002395 Daucus carota HOM05D005221 ORTHO05D006355 3.1e-31 139.0 167 50.3
Sc19g0004310 Simmondsia chinensis HOM05D005221 ORTHO05D006355 3.1e-31 139.0 179 50.8
EL10As3g23360 Beta vulgaris HOM05D005221 ORTHO05D006355 6.9e-31 137.9 197 48.2
CiPaw.02G095300 Carya illinoinensis HOM05D005221 ORTHO05D006355 9.0e-31 137.5 171 50.3
Glyma.20G143700 Glycine max HOM05D005221 ORTHO05D006355 9.0e-31 137.5 181 51.4
Nn1g02242 Nelumbo nucifera HOM05D005221 ORTHO05D006355 9.0e-31 137.5 187 51.3
Glyma.10G249900 Glycine max HOM05D005221 ORTHO05D006355 1.5e-30 136.7 184 50.0
Gohir.A09G214300 Gossypium hirsutum HOM05D005221 ORTHO05D006355 1.5e-30 136.7 178 52.2
CAN.G668.8 Capsicum annuum HOM05D005221 ORTHO05D006355 2.0e-30 136.3 170 50.0
PGSC0003DMG400031851 Solanum tuberosum HOM05D005221 ORTHO05D006355 3.4e-30 135.6 164 52.4
THA.LOC104818779 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 3.4e-30 135.6 176 53.4
Lsat_1_v5_gn_5_148500 Lactuca sativa HOM05D005221 ORTHO05D006355 4.5e-30 135.2 163 56.4
VMungo0720G0147 Vigna mungo HOM05D005221 ORTHO05D006355 1.0e-29 134.0 181 50.8
Gohir.D09G216800 Gossypium hirsutum HOM05D005221 ORTHO05D006355 2.2e-29 132.9 176 52.3
Gorai.006G237300 Gossypium raimondii HOM05D005221 ORTHO05D006355 2.2e-29 132.9 176 52.3
HanXRQChr10g0296561 Helianthus annuus HOM05D005221 ORTHO05D006355 2.9e-29 132.5 165 53.3
Nitab4.5_0000321g0080 Nicotiana tabacum HOM05D005221 ORTHO05D006355 3.8e-29 132.1 164 51.8
Sopen09g030550 Solanum pennellii HOM05D005221 ORTHO05D006355 3.8e-29 132.1 166 51.8
CiPaw.01G163700 Carya illinoinensis HOM05D005221 ORTHO05D006355 6.5e-29 131.3 150 57.3
Solyc09g075740.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 6.5e-29 131.3 164 51.8
CsaV3_6G038280 Cucumis sativus L. HOM05D005221 ORTHO05D006355 1.1e-28 130.6 178 48.9
Phvul.007G054700 Phaseolus vulgaris HOM05D005221 ORTHO05D006355 2.5e-28 129.4 182 49.5
CANSAT78G1299 Cannabis sativa HOM05D005221 ORTHO05D006355 7.2e-28 127.9 197 48.2
Lalb_Chr06g0160581 Lupinus albus HOM05D005221 ORTHO05D006355 2.1e-27 126.3 174 49.4
MBI17_g31753_MAGBIO Magnolia biondii HOM05D005221 ORTHO05D006355 2.7e-27 125.9 158 46.8
SGA_v2.0_scaffold10G05107 Striga asiatica HOM05D005221 ORTHO05D006355 2.7e-27 125.9 164 53.0
Aqoxy5G00503 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 3.6e-27 125.6 176 49.4
DCAR_024599 Daucus carota HOM05D005221 ORTHO05D006355 7.9e-27 124.4 168 47.0
TAR636G2071 Trochodendron aralioides HOM05D002203 ORTHO05D002647 2.3e-26 122.9 135 60.0
AT3G05980 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 5.1e-26 121.7 180 48.3
Carub.0003s0539 Capsella rubella HOM05D005221 ORTHO05D006355 6.7e-26 121.3 183 49.2
Aa31LG5G16450 Aethionema arabicum HOM05D005221 ORTHO05D006355 3.3e-25 119.0 176 46.6
AL3G16790 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 2.8e-24 115.9 184 42.9
BcaC05g30072 Brassica carinata HOM05D005221 ORTHO05D006355 3.7e-24 115.5 175 48.6
BcaC09g47869 Brassica carinata HOM05D005221 ORTHO05D006355 3.7e-24 115.5 172 48.8
Migut.N00171 Erythranthe guttata HOM05D005221 ORTHO05D006355 4.8e-24 115.2 185 44.3
A05p42050 Brassica napus HOM05D005221 ORTHO05D006355 6.3e-24 114.8 169 47.3
BolC1t05645H Brassica oleracea HOM05D005221 ORTHO05D006355 6.3e-24 114.8 174 48.3
BraA05t22925Z Brassica rapa HOM05D005221 ORTHO05D006355 6.3e-24 114.8 169 47.3
C05p61280 Brassica napus HOM05D005221 ORTHO05D006355 1.8e-23 113.2 173 48.6
BolC5t34787H Brassica oleracea HOM05D005221 ORTHO05D006355 1.8e-23 113.2 173 48.6
PGR142G0441 Punica granatum HOM05D005221 ORTHO05D006355 4.1e-23 112.1 210 41.9
BraA01t04457Z Brassica rapa HOM05D005221 ORTHO05D006355 6.9e-23 111.3 170 46.5
Eucgr.B01092 Eucalyptus grandis HOM05D005221 ORTHO05D006355 9.1e-23 110.9 206 42.2
BraA03t10262Z Brassica rapa HOM05D005221 ORTHO05D006355 1.2e-22 110.5 179 45.8
A03p09440 Brassica napus HOM05D005221 ORTHO05D006355 1.0e-21 107.5 180 46.7
BolC3t13571H Brassica oleracea HOM05D005221 ORTHO05D006355 2.2e-21 106.3 167 46.7
FAN17G2349 Fragaria x ananassa HOM05D005221 ORTHO05D006355 5.0e-21 105.1 163 39.9
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 5.0e-21 105.1 91 58.2
MSTRG.4014 Avicennia marina HOM05D005221 ORTHO05D006355 6.5e-21 104.8 168 44.6
CARHR080490 Cardamine hirsuta HOM05D005221 ORTHO05D006355 1.1e-20 104.0 183 43.7
C03p11020 Brassica napus HOM05D005221 ORTHO05D006355 1.9e-20 103.2 175 46.3
PGR004G1499 Punica granatum HOM05D005221 ORTHO05D006355 1.9e-20 103.2 198 40.4
Thhalv10021379m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.6e-19 100.1 185 42.2
BcaB01g04866 Brassica carinata HOM05D005221 ORTHO05D006355 2.1e-19 99.8 176 44.9
BcaB01g05141 Brassica carinata HOM05D005221 ORTHO05D006355 3.6e-19 99.0 164 47.0
BolC9t58548H Brassica oleracea HOM05D005221 ORTHO05D006355 1.4e-18 97.1 194 39.2
Ah.04g154490 Amaranthus hybridus HOM05D005221 ORTHO05D006355 1.8e-18 96.7 156 46.8
Sp3g04920 Schrenkiella parvula HOM05D005221 ORTHO05D006355 1.8e-18 96.7 185 42.7
AT5G19340 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 1.1e-17 94.0 195 41.5
Thhalv10016073m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.1e-17 94.0 187 40.1
Nitab4.5_0007609g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 2.0e-17 93.2 80 62.5
A10p20340 Brassica napus HOM05D005221 ORTHO05D006355 5.7e-17 91.7 198 37.9
BraA10t44105Z Brassica rapa HOM05D005221 ORTHO05D006355 5.7e-17 91.7 198 37.9
BcaC04g18576 Brassica carinata HOM05D005221 ORTHO05D006355 2.8e-16 89.4 200 38.0
C09p56940 Brassica napus HOM05D005221 ORTHO05D006355 2.8e-16 89.4 200 38.0
SGA_v2.0_scaffold39G15291 Striga asiatica HOM05D005221 ORTHO05D006355 4.1e-15 85.5 112 50.0
Carub.0006s1768 Capsella rubella HOM05D005221 ORTHO05D006355 9.1e-15 84.3 194 37.6
BcaNung07026 Brassica carinata HOM05D005221 ORTHO05D006355 2.0e-14 83.2 100 47.0
AL6G30830 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 1.3e-13 80.5 191 39.3
SGA_v2.0_scaffold237G43792 Striga asiatica HOM05D005221 ORTHO05D006355 1.3e-13 80.5 152 35.5
Atru.chr4.2515 Acer truncatum HOM05D005221 ORTHO05D006355 2.2e-13 79.7 168 42.3
Psat6g208720 Pisum sativum HOM05D005221 ORTHO05D006355 3.8e-13 79.0 79 60.8
Sp6g25070 Schrenkiella parvula HOM05D005221 ORTHO05D006355 8.5e-13 77.8 189 38.1
PSO302G0248 Papaver somniferum HOM05D005221 ORTHO05D006355 1.1e-12 77.4 87 51.7
BcaB08g36581 Brassica carinata HOM05D005221 ORTHO05D006355 2.1e-11 73.2 191 35.1
CARHR193620 Cardamine hirsuta HOM05D005221 ORTHO05D006355 2.7e-11 72.8 198 35.9
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea HOM05D005221 ORTHO05D006355 3.9e-10 68.9 163 38.0
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 5.2e-10 68.6 89 42.7
ATR0626G396 Amborella trichopoda HOM05D005221 ORTHO05D006355 7.7e-06 54.7 97 36.1


User provided reference genes

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