Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P578T28 Lonicera japonica HOM05D001925 ORTHO05D004257 4.0e-78 294.7 146 100.0
Lj6A572T61 Lonicera japonica HOM05D001925 ORTHO05D004257 1.4e-75 286.2 146 97.3
Lj7P510T18 Lonicera japonica HOM05D001925 ORTHO05D004257 5.2e-70 267.7 148 92.6
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 5.3e-30 134.8 148 50.7
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 5.9e-29 131.3 147 49.7
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 8.5e-28 127.5 146 47.3
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 1.4e-27 126.7 151 47.7
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 6.1e-26 121.3 149 44.3
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.7e-23 113.2 146 44.5
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.7e-23 112.1 148 42.6
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 8.2e-23 110.9 148 47.3
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.4e-22 110.2 154 44.2
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 5.3e-22 108.2 151 45.0
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 5.3e-22 108.2 146 44.5
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 1.2e-21 107.1 150 42.0
Nitab4.5_0008206g0010 Nicotiana tabacum HOM05D001925 ORTHO05D004257 4.5e-21 105.1 144 38.9
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 7.7e-21 104.4 148 43.2
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.3e-20 103.6 153 43.1
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.7e-20 103.2 143 39.2
Nn1g01562 Nelumbo nucifera HOM05D001925 ORTHO05D004257 3.8e-20 102.1 155 42.6
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 8.5e-20 100.9 148 41.9
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.1e-19 100.5 169 39.1
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 5.5e-19 98.2 154 41.6
Solyc10g012420.3 Solanum lycopersicum HOM05D001925 ORTHO05D004257 5.5e-19 98.2 146 39.7
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 9.4e-19 97.4 151 40.4
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 9.4e-19 97.4 145 40.7
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.6e-18 96.7 150 41.3
PGSC0003DMG400006504 Solanum tuberosum HOM05D001925 ORTHO05D004257 2.1e-18 96.3 145 40.0
CAN.G116.9 Capsicum annuum HOM05D001925 ORTHO05D004257 2.7e-18 95.9 144 37.5
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 3.6e-18 95.5 121 43.8
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 4.7e-18 95.1 150 42.0
Nn6g33385 Nelumbo nucifera HOM05D001925 ORTHO05D004257 8.0e-18 94.4 154 41.6
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 8.0e-18 94.4 150 38.7
Sopen10g006250 Solanum pennellii HOM05D001925 ORTHO05D004257 1.4e-17 93.6 146 38.4
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 3.0e-17 92.4 150 38.7
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.0e-17 92.4 152 40.8
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 6.7e-17 91.3 152 42.1
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.1e-16 90.5 150 36.7
Sabra14G0062300 Salix brachista HOM05D001925 ORTHO05D004257 1.5e-16 90.1 127 43.3
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.0e-16 89.7 152 41.4
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 2.6e-16 89.4 147 38.8
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 2.6e-16 89.4 150 42.0
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.6e-16 89.4 155 41.3
Sabra02G0127500 Salix brachista HOM05D001925 ORTHO05D004257 3.3e-16 89.0 127 44.1
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 4.4e-16 88.6 153 37.9
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 5.7e-16 88.2 151 39.1
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 1.7e-15 86.7 152 38.8
Peaxi162Scf00008g02423 Petunia axillaris HOM05D001925 ORTHO05D004257 1.7e-15 86.7 146 31.5
Potri.002G160700 Populus trichocarpa HOM05D001925 ORTHO05D004257 2.2e-15 86.3 127 43.3
Potri.014G086000 Populus trichocarpa HOM05D001925 ORTHO05D004257 2.2e-15 86.3 127 42.5
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 2.8e-15 85.9 146 40.4
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.7e-15 85.5 122 38.5
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 4.8e-15 85.1 150 36.7
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 4.8e-15 85.1 150 36.7
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 1.1e-14 84.0 154 37.0
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 1.4e-14 83.6 154 37.7
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 1.4e-14 83.6 142 40.8
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 2.4e-14 82.8 147 35.4
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 4.1e-14 82.0 150 36.0
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 5.3e-14 81.6 150 36.0
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.3e-14 81.6 150 35.3
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 7.0e-14 81.3 150 35.3
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 7.0e-14 81.3 147 36.1
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 1.2e-13 80.5 149 34.2
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.2e-13 80.5 150 35.3
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.5e-13 79.0 150 34.7
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 1.7e-12 76.6 150 34.0
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 2.2e-12 76.3 151 35.8
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.1e-11 73.9 138 37.7
AUR62022581 Chenopodium quinoa HOM05D001925 ORTHO05D004257 1.5e-11 73.6 153 34.6
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 1.5e-11 73.6 146 34.2
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 4.2e-11 72.0 126 32.5
PSO782G1204 Papaver somniferum HOM05D001925 ORTHO05D004257 9.4e-11 70.9 131 34.4
Ah.05g180510 Amaranthus hybridus HOM05D001925 ORTHO05D004257 1.2e-10 70.5 151 29.1
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 8.0e-10 67.8 148 31.1
PSO478G2649 Papaver somniferum HOM05D001925 ORTHO05D004257 1.4e-09 67.0 147 31.3
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 3.0e-09 65.9 147 34.7
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 3.0e-09 65.9 146 34.2
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 4.0e-09 65.5 148 30.4
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 4.0e-09 65.5 96 39.6
AUR62004372 Chenopodium quinoa HOM05D001925 ORTHO05D004257 5.2e-09 65.1 153 33.3
MBI17_g42624_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 7.5e-08 61.2 113 34.5
MSTRG.12873 Avicennia marina HOM05D001925 ORTHO05D004257 1.7e-07 60.1 103 34.0
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 1.7e-07 60.1 148 27.0
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 2.8e-07 59.3 150 31.3
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 3.7e-07 58.9 144 28.5
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 3.7e-07 58.9 151 30.5
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 4.8e-07 58.5 148 31.8
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 6.3e-07 58.2 151 28.5
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 8.2e-07 57.8 143 32.2
HanXRQChr13g0426611 Helianthus annuus HOM05D001925 ORTHO05D004257 8.2e-07 57.8 92 39.1
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 8.2e-07 57.8 152 30.3
Eucgr.E00120 Eucalyptus grandis HOM05D001925 ORTHO05D004257 1.1e-06 57.4 147 31.3
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 1.4e-06 57.0 149 32.2
ECA236G3632 Erigeron canadensis HOM05D001925 ORTHO05D004257 4.1e-06 55.5 146 30.1
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 9.1e-06 54.3 151 28.5


User provided reference genes

Program Settings