Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P432T3 Lonicera japonica HOM05D000056 ORTHO05D000019 6.9e-46 186.8 85 100.0
Lj6P424T3 Lonicera japonica HOM05D000056 ORTHO05D000019 1.5e-37 159.1 85 90.6
Lj6P393T47 Lonicera japonica HOM05D000056 ORTHO05D000019 3.8e-20 101.3 85 61.2
Lj6P403T7 Lonicera japonica HOM05D000056 ORTHO05D000019 7.9e-18 93.6 84 54.8
Lj6P396T10 Lonicera japonica HOM05D000056 ORTHO05D000019 1.0e-17 93.2 84 58.3
Lj6P430T2 Lonicera japonica HOM05D000056 ORTHO05D000019 1.8e-17 92.4 84 56.0
Lj3C388G5 Lonicera japonica HOM05D000056 ORTHO05D000019 1.1e-16 89.7 79 58.2
Lj3P388T17 Lonicera japonica HOM05D000056 ORTHO05D000019 1.1e-16 89.7 79 58.2
Lj6P401T11 Lonicera japonica HOM05D000056 ORTHO05D000019 1.5e-16 89.4 84 52.4
Lj3A380T19 Lonicera japonica HOM05D000056 ORTHO05D000019 7.4e-16 87.0 79 58.2
Lj3P96T8 Lonicera japonica HOM05D000056 ORTHO05D000019 7.4e-16 87.0 85 51.8
Lj3A388T20 Lonicera japonica HOM05D000056 ORTHO05D000019 1.6e-15 85.9 79 58.2
Dinv27210 Davidia involucrata HOM05D000056 ORTHO05D000019 1.1e-14 83.2 84 48.8
Actinidia35851 Actinidia chinensis HOM05D000056 ORTHO05D000019 2.4e-14 82.0 82 48.8
Lj6P418T2 Lonicera japonica HOM05D000056 ORTHO05D000019 2.4e-14 82.0 76 53.9
Lj3C97T0 Lonicera japonica HOM05D000056 ORTHO05D000019 4.1e-14 81.3 86 46.5
Lj3P101T2 Lonicera japonica HOM05D000056 ORTHO05D000019 4.1e-14 81.3 86 46.5
CSS0022100 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 5.3e-14 80.9 84 46.4
CSS0033762 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 6.9e-14 80.5 85 48.2
CSS0008014 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 1.5e-13 79.3 84 46.4
Lj3C380G3 Lonicera japonica HOM05D000056 ORTHO05D000019 2.0e-13 79.0 79 53.2
Lj3P387T18 Lonicera japonica HOM05D000056 ORTHO05D000019 2.6e-13 78.6 79 53.2
Lj6P419T3 Lonicera japonica HOM05D000056 ORTHO05D000019 2.6e-13 78.6 79 48.1
Lju1668C0T0 Lonicera japonica HOM05D000056 ORTHO05D000019 3.4e-13 78.2 84 48.8
Lj3C90G0 Lonicera japonica HOM05D000056 ORTHO05D000019 1.7e-12 75.9 84 50.0
Lj6P417T2 Lonicera japonica HOM05D000056 ORTHO05D000019 2.2e-12 75.5 84 45.2
Lj6A422G4 Lonicera japonica HOM05D000056 ORTHO05D000019 1.4e-11 72.8 86 43.0
Lj6P435T5 Lonicera japonica HOM05D000056 ORTHO05D000019 1.9e-11 72.4 85 41.2
Hma1.2p1_1660F.1_g296210 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 4.2e-11 71.2 84 47.6
SalBow1G0741 Salvia bowleyana HOM05D000056 ORTHO05D000019 5.5e-11 70.9 85 50.6
Lj6P429T8 Lonicera japonica HOM05D000056 ORTHO05D000019 7.2e-11 70.5 78 50.0
Dinv38195 Davidia involucrata HOM05D000056 ORTHO05D000019 1.2e-10 69.7 86 43.0
Migut.G00735 Erythranthe guttata HOM05D000056 ORTHO05D000019 1.2e-10 69.7 83 45.8
Hma1.2p1_1660F.1_g296200 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 1.2e-10 69.7 84 47.6
Hma1.2p1_2877F.1_g329770 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 1.2e-10 69.7 84 47.6
Lj6P437T8 Lonicera japonica HOM05D000056 ORTHO05D000019 2.1e-10 68.9 80 46.2
Lj3P94T0 Lonicera japonica HOM05D000056 ORTHO05D000019 2.7e-10 68.6 73 47.9
SalBow1G4240 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.0e-09 66.6 81 44.4
SalBow1G6589 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.0e-09 66.6 81 43.2
Dinv38197 Davidia involucrata HOM05D000056 ORTHO05D000019 1.4e-09 66.2 79 44.3
SalBow8G0908 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.4e-09 66.2 81 44.4
SalBow1G8220 Salvia bowleyana HOM05D000056 ORTHO05D000019 1.8e-09 65.9 81 42.0
SalBow8G1309 Salvia bowleyana HOM05D000056 ORTHO05D000019 3.9e-09 64.7 81 43.2
SalBow1G7618 Salvia bowleyana HOM05D000056 ORTHO05D000019 5.1e-09 64.3 81 43.2
CSS0049160 Camellia sinensis var. sinensis HOM05D000056 ORTHO05D000019 2.5e-08 62.0 81 45.7
Ciclev10005001m.g Citrus clementina HOM05D000056 ORTHO05D000019 2.5e-08 62.0 77 42.9
SalBow1G4152 Salvia bowleyana HOM05D000056 ORTHO05D000019 2.5e-08 62.0 81 44.4
SalBow1G1810 Salvia bowleyana HOM05D000056 ORTHO05D000019 3.3e-08 61.6 81 42.0
SGA_v2.0_scaffold8G04274 Striga asiatica HOM05D000056 ORTHO05D000019 3.3e-08 61.6 76 46.1
MSTRG.4237 Avicennia marina HOM05D000056 ORTHO05D000019 5.7e-08 60.8 78 41.0
Nitab4.5_0013613g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 1.3e-07 59.7 83 41.0
Nitab4.5_0002150g0210 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.2e-07 58.9 83 39.8
vmacro00449 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 2.2e-07 58.9 86 40.7
Actinidia18452 Actinidia chinensis HOM05D000056 ORTHO05D000019 4.8e-07 57.8 76 43.4
Sopen12g033980 Solanum pennellii HOM05D000056 ORTHO05D000019 8.2e-07 57.0 83 41.0
Potri.019G108400 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.1e-06 56.6 87 40.2
Ciclev10007039m.g Citrus clementina HOM05D000056 ORTHO05D000019 1.4e-06 56.2 80 40.0
Dinv38271 Davidia involucrata HOM05D000056 ORTHO05D000019 1.4e-06 56.2 79 39.2
Duzib128G0299 Durio zibethinus HOM05D000056 ORTHO05D000019 1.4e-06 56.2 78 39.7
Duzib213G0646 Durio zibethinus HOM05D000056 ORTHO05D000019 1.4e-06 56.2 93 36.6
Lj3C96T1 Lonicera japonica HOM05D000056 ORTHO05D000019 1.4e-06 56.2 84 35.7
COL.COLO4_17390 Corchorus olitorius HOM05D000056 ORTHO05D000019 1.8e-06 55.8 80 41.2
Gohir.A09G052600 Gossypium hirsutum HOM05D000056 ORTHO05D000019 1.8e-06 55.8 77 45.5
Solyc12g099300.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.4e-06 55.5 83 39.8
SalBow1G6153 Salvia bowleyana HOM05D000056 ORTHO05D000019 4.1e-06 54.7 57 49.1
Gohir.D09G052972 Gossypium hirsutum HOM05D000056 ORTHO05D000019 5.3e-06 54.3 77 45.5
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 6.9e-06 53.9 77 40.3
PGSC0003DMG400004622 Solanum tuberosum HOM05D000056 ORTHO05D000019 6.9e-06 53.9 83 38.6
Duzib213G0874 Durio zibethinus HOM05D000056 ORTHO05D000019 9.1e-06 53.5 80 40.0
Manes.03G151000 Manihot esculenta HOM05D000056 ORTHO05D000019 9.1e-06 53.5 89 37.1
SalBow6G0860 Salvia bowleyana HOM05D000056 ORTHO05D000019 9.1e-06 53.5 88 38.6


User provided reference genes

Program Settings