Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P390T29 Lonicera japonica HOM05D004237 ORTHO05D005002 4.1e-73 278.1 155 100.0
DCAR_030819 Daucus carota HOM05D004237 ORTHO05D005002 3.8e-42 175.3 147 66.7
Dinv27207 Davidia involucrata HOM05D004237 ORTHO05D005002 9.3e-41 170.6 128 70.3
Dinv38185 Davidia involucrata HOM05D004237 ORTHO05D005002 6.2e-37 157.9 132 65.2
Oeu063463.1 Olea europaea HOM05D004237 ORTHO05D005002 2.6e-35 152.5 125 65.6
Actinidia28992 Actinidia chinensis HOM05D004237 ORTHO05D005002 5.4e-33 144.8 132 60.6
Oeu025033.1 Olea europaea HOM05D004237 ORTHO05D005002 4.6e-32 141.7 132 62.9
Cpa.g.sc83.32 Carica papaya HOM05D004237 ORTHO05D005002 1.0e-31 140.6 140 57.1
Sabra16G0201600 Salix brachista HOM05D004237 ORTHO05D005002 3.0e-31 139.0 144 56.9
MSTRG.21980 Avicennia marina HOM05D004237 ORTHO05D005002 5.6e-30 134.8 144 54.2
Sabra17G0051800 Salix brachista HOM05D004237 ORTHO05D005002 5.6e-30 134.8 140 55.0
CSS0022501 Camellia sinensis var. sinensis HOM05D004237 ORTHO05D005002 2.8e-29 132.5 138 55.8
PGSC0003DMG400026424 Solanum tuberosum HOM05D004237 ORTHO05D005002 2.8e-29 132.5 150 56.0
Actinidia11451 Actinidia chinensis HOM05D004237 ORTHO05D005002 6.2e-29 131.3 156 53.8
AUR62020847 Chenopodium quinoa HOM05D004237 ORTHO05D005002 6.2e-29 131.3 142 53.5
Potri.001G318600 Populus trichocarpa HOM05D004237 ORTHO05D005002 6.2e-29 131.3 140 54.3
Hma1.2p1_2958F.1_g330800 Hydrangea macrophylla HOM05D004237 ORTHO05D005002 3.1e-28 129.0 158 52.5
Atru.chr4.1600 Acer truncatum HOM05D004237 ORTHO05D005002 6.9e-28 127.9 154 53.2
Cfa014954 Carpinus fangiana HOM05D004237 ORTHO05D005002 6.9e-28 127.9 132 58.3
Haze_11643 Corylus avellana HOM05D004237 ORTHO05D005002 3.4e-27 125.6 132 57.6
Glyma.08G110600 Glycine max HOM05D004237 ORTHO05D005002 3.4e-27 125.6 152 52.0
Ca_17976_v3 Cicer arietinum L. HOM05D004237 ORTHO05D005002 4.5e-27 125.2 139 54.0
Rhsim02G0061200 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.5e-27 125.2 150 60.0
RhsimUnG0035800 Rhododendron simsii HOM05D004237 ORTHO05D005002 4.5e-27 125.2 150 60.0
Duzib212G0922 Durio zibethinus HOM05D004237 ORTHO05D005002 5.8e-27 124.8 132 53.8
Medtr8g085190 Medicago truncatula HOM05D004237 ORTHO05D005002 1.3e-26 123.6 146 52.1
CiPaw.01G118000 Carya illinoinensis HOM05D004237 ORTHO05D005002 2.2e-26 122.9 128 54.7
Potri.017G058200 Populus trichocarpa HOM05D004237 ORTHO05D005002 2.2e-26 122.9 148 50.7
Manes.15G056100 Manihot esculenta HOM05D004237 ORTHO05D005002 2.9e-26 122.5 150 50.7
Thecc.04G196500 Theobroma cacao HOM05D004237 ORTHO05D005002 3.8e-26 122.1 144 52.1
Gohir.D10G137600 Gossypium hirsutum HOM05D004237 ORTHO05D005002 1.4e-25 120.2 146 51.4
Sc13g0000310 Simmondsia chinensis HOM05D004237 ORTHO05D005002 2.5e-25 119.4 155 49.7
Gorai.011G152800 Gossypium raimondii HOM05D004237 ORTHO05D005002 3.2e-25 119.0 156 51.3
Nitab4.5_0007828g0040 Nicotiana tabacum HOM05D004237 ORTHO05D005002 5.5e-25 118.2 148 56.1
Phvul.003G050200 Phaseolus vulgaris HOM05D004237 ORTHO05D005002 1.2e-24 117.1 140 52.1
MELO3C020354.2 Cucumis melo HOM05D004237 ORTHO05D005002 1.6e-24 116.7 129 50.4
Peaxi162Scf00047g00110 Petunia axillaris HOM05D004237 ORTHO05D005002 1.6e-24 116.7 122 60.7
Gohir.A10G128300 Gossypium hirsutum HOM05D004237 ORTHO05D005002 2.1e-24 116.3 134 50.7
Ciclev10004964m.g Citrus clementina HOM05D004237 ORTHO05D005002 3.5e-24 115.5 154 49.4
CsaV3_2G011170 Cucumis sativus L. HOM05D004237 ORTHO05D005002 3.5e-24 115.5 129 49.6
Manes.03G145100 Manihot esculenta HOM05D004237 ORTHO05D005002 7.9e-24 114.4 142 46.5
Sed0001983 Sechium edule HOM05D004237 ORTHO05D005002 1.0e-23 114.0 129 48.8
Sopen09g035130 Solanum pennellii HOM05D004237 ORTHO05D005002 1.0e-23 114.0 150 56.0
Solyc09g092210.4 Solanum lycopersicum HOM05D004237 ORTHO05D005002 1.8e-23 113.2 150 56.0
vmacro15560 Vaccinium macrocarpon HOM05D004237 ORTHO05D005002 1.8e-23 113.2 129 58.9
Nitab4.5_0000697g0020 Nicotiana tabacum HOM05D004237 ORTHO05D005002 3.0e-23 112.5 148 54.7
Prupe.1G163000 Prunus persica HOM05D004237 ORTHO05D005002 5.1e-23 111.7 128 50.8
CAN.G1565.17 Capsicum annuum HOM05D004237 ORTHO05D005002 8.7e-23 110.9 152 53.3
MD13G1282300 Malus domestica HOM05D004237 ORTHO05D005002 7.4e-22 107.8 134 49.3
ECA238G4613 Erigeron canadensis HOM05D004237 ORTHO05D005002 2.1e-21 106.3 121 48.8
MD04G1016300 Malus domestica HOM05D004237 ORTHO05D005002 4.8e-21 105.1 156 48.1
VMungo0251G2499 Vigna mungo HOM05D004237 ORTHO05D005002 4.8e-21 105.1 140 45.7
COL.COLO4_20213 Corchorus olitorius HOM05D004237 ORTHO05D005002 5.3e-20 101.7 138 47.1
QL06p026437 Quercus lobata HOM05D004237 ORTHO05D005002 1.2e-19 100.5 147 44.9
FAN07G1461 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.0e-18 97.4 121 48.8
arahy.Tifrunner.gnm1.ann1.BLV0FA Arachis hypogaea HOM05D004237 ORTHO05D005002 1.3e-18 97.1 134 47.8
arahy.Tifrunner.gnm1.ann1.T9JHLZ Arachis hypogaea HOM05D004237 ORTHO05D005002 1.3e-18 97.1 134 47.8
FvH4_4g13400 Fragaria vesca HOM05D004237 ORTHO05D005002 1.7e-18 96.7 121 48.8
FAN12G1632 Fragaria x ananassa HOM05D004237 ORTHO05D005002 1.7e-18 96.7 121 48.8
RcHm_v2.0_Chr4g0413771 Rosa chinensis HOM05D004237 ORTHO05D005002 2.2e-18 96.3 129 46.5
CANSAT78G0306 Cannabis sativa HOM05D004237 ORTHO05D005002 3.8e-18 95.5 163 45.4
Lj4g0001711 Lotus japonicus HOM05D004237 ORTHO05D005002 6.5e-18 94.7 150 45.3
TAR636G2161 Trochodendron aralioides HOM05D004237 ORTHO05D005002 7.1e-17 91.3 155 47.7
Lalb_Chr07g0186771 Lupinus albus HOM05D004237 ORTHO05D005002 5.1e-15 85.1 129 43.4
Aqoxy2G03968 Aquilegia oxysepala HOM05D004237 ORTHO05D005002 1.1e-12 77.4 128 42.2
Eucgr.H02692 Eucalyptus grandis HOM05D004237 ORTHO05D005002 9.0e-12 74.3 143 37.1
unitig_45.g31538 Utricularia gibba HOM05D004237 ORTHO05D005002 1.3e-10 70.5 78 53.8
unitig_578.g16512 Utricularia gibba HOM05D004237 ORTHO05D005002 1.3e-10 70.5 78 53.8
PSO017G6634 Papaver somniferum HOM05D004237 ORTHO05D005002 2.7e-08 62.8 140 41.4
TPR.G11799 Trifolium pratense HOM05D004237 ORTHO05D005002 3.9e-07 58.9 73 47.9


User provided reference genes

Program Settings