Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P389T10 Lonicera japonica HOM05D000097 ORTHO05D013593 9.2e-56 219.9 107 100.0
Lj6A385G50 Lonicera japonica HOM05D000097 ORTHO05D000041 1.0e-38 163.3 87 92.0
Lj6A388G43 Lonicera japonica HOM05D000097 ORTHO05D000041 1.0e-38 163.3 87 89.7
Lj6A388G44 Lonicera japonica HOM05D000097 ORTHO05D000041 1.0e-38 163.3 87 92.0
Lj6A386G19 Lonicera japonica HOM05D014049 ORTHO05D000001 5.1e-38 161.0 87 89.7
Dinv09595 Davidia involucrata HOM05D000097 ORTHO05D000041 6.7e-14 80.9 98 41.8
Dinv00709 Davidia involucrata HOM05D000097 ORTHO05D000041 5.6e-13 77.8 108 37.0
Dinv02040 Davidia involucrata HOM05D000097 ORTHO05D000041 6.2e-12 74.3 98 38.8
Dinv07199 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-11 73.2 86 41.9
Dinv13259 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-11 73.2 83 42.2
Dinv13278 Davidia involucrata HOM05D000097 ORTHO05D000041 1.4e-11 73.2 83 42.2
Lj6C385G14 Lonicera japonica HOM05D000097 ORTHO05D000041 1.4e-11 73.2 38 84.2
vmacro10274 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 2.4e-11 72.4 78 37.2
Dinv23999 Davidia involucrata HOM05D000097 ORTHO05D000041 3.1e-11 72.0 84 44.0
Hma1.2p1_2656F.1_g326290 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 9.0e-11 70.5 93 37.6
Lj3C929T0 Lonicera japonica HOM05D000097 ORTHO05D000041 1.5e-10 69.7 92 42.4
Dinv02033 Davidia involucrata HOM05D000097 ORTHO05D000041 2.0e-10 69.3 90 43.3
Dinv23993 Davidia involucrata HOM05D000097 ORTHO05D000041 2.0e-10 69.3 84 40.5
Dinv15019 Davidia involucrata HOM05D000097 ORTHO05D000041 2.6e-10 68.9 84 42.9
Dinv13269 Davidia involucrata HOM05D000097 ORTHO05D000041 7.6e-10 67.4 79 39.2
Lsat_1_v5_gn_1_43320 Lactuca sativa HOM05D000097 ORTHO05D000041 7.6e-10 67.4 81 43.2
Dinv03005 Davidia involucrata HOM05D000097 ORTHO05D000041 1.0e-09 67.0 88 39.8
Dinv13270 Davidia involucrata HOM05D002148 ORTHO05D013593 1.7e-09 66.2 90 36.7
Dinv13264 Davidia involucrata HOM05D014049 ORTHO05D013593 2.2e-09 65.9 98 38.8
Hma1.2p1_2243F.1_g317900 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 2.9e-09 65.5 81 39.5
Dinv09594 Davidia involucrata HOM05D000097 ORTHO05D000041 3.8e-09 65.1 91 38.5
Dinv13260 Davidia involucrata HOM05D000097 ORTHO05D000041 4.9e-09 64.7 85 40.0
TAR192G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.9e-09 64.7 61 39.3
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.4e-08 63.2 98 37.8
Rhsim03G0047400 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.4e-08 63.2 88 37.5
Hma1.2p1_1497F.1_g287070 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 3.2e-08 62.0 82 37.8
Dinv00959 Davidia involucrata HOM05D000097 ORTHO05D000041 4.2e-08 61.6 64 46.9
Rhsim03G0102900 Rhododendron simsii HOM05D032117 ORTHO05D000041 4.2e-08 61.6 76 40.8
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.5e-08 61.2 98 36.7
Dinv02036 Davidia involucrata HOM05D000097 ORTHO05D000041 5.5e-08 61.2 84 40.5
Hma1.2p1_1497F.1_g287050 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 5.5e-08 61.2 79 38.0
Hma1.2p1_2656F.1_g326340 Hydrangea macrophylla HOM05D000097 ORTHO05D000041 5.5e-08 61.2 79 38.0
CSS0003715 Camellia sinensis var. sinensis HOM05D000097 ORTHO05D000041 9.3e-08 60.5 74 37.8
Dinv10726 Davidia involucrata HOM05D000097 ORTHO05D000041 1.2e-07 60.1 88 38.6
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.6e-07 59.7 98 36.7
Dinv14517 Davidia involucrata HOM05D000097 ORTHO05D000041 2.1e-07 59.3 71 43.7
Rhsim03G0048500 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.1e-07 59.3 79 39.2
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 2.7e-07 58.9 76 32.9
COL.COLO4_07246 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.5e-07 58.5 85 35.3
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-07 58.5 87 33.3
HanXRQChr09g0244201 Helianthus annuus HOM05D000097 ORTHO05D000041 4.6e-07 58.2 79 39.2
SGA_v2.0_scaffold91G28110 Striga asiatica HOM05D000097 ORTHO05D000041 6.0e-07 57.8 74 37.8
QL03p028934 Quercus lobata HOM05D000002 ORTHO05D000001 7.9e-07 57.4 74 37.8
Rhsim03G0047800 Rhododendron simsii HOM05D000097 ORTHO05D000041 7.9e-07 57.4 74 37.8
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 7.9e-07 57.4 65 44.6
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 7.9e-07 57.4 88 35.2
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.0e-06 57.0 86 37.2
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.0e-06 57.0 81 38.3
Peaxi162Scf00226g00923 Petunia axillaris HOM05D000097 ORTHO05D000041 1.0e-06 57.0 74 41.9
Rhsim03G0104500 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.0e-06 57.0 76 39.5
Rhsim07G0243100 Rhododendron simsii HOM05D000097 ORTHO05D000041 1.0e-06 57.0 85 37.6
COL.COLO4_13671 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.3e-06 56.6 86 33.7
Dinv13272 Davidia involucrata HOM05D000097 ORTHO05D000041 1.3e-06 56.6 82 37.8
HanXRQChr01g0028891 Helianthus annuus HOM05D000097 ORTHO05D000041 1.3e-06 56.6 76 38.2
HanXRQChr11g0353581 Helianthus annuus HOM05D000097 ORTHO05D000041 1.3e-06 56.6 73 41.1
HanXRQChr13g0394641 Helianthus annuus HOM05D000097 ORTHO05D000041 1.3e-06 56.6 82 36.6
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 1.3e-06 56.6 76 31.6
vmacro04303 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.3e-06 56.6 86 33.7
vmacro22855 Vaccinium macrocarpon HOM05D000097 ORTHO05D000041 1.3e-06 56.6 86 33.7
HanXRQChr11g0353571 Helianthus annuus HOM05D000097 ORTHO05D000041 1.8e-06 56.2 73 38.4
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.8e-06 56.2 80 36.2
Lju99C0T4 Lonicera japonica HOM05D014049 ORTHO05D013593 1.8e-06 56.2 88 34.1
Atru.chr7.1131 Acer truncatum HOM05D000002 ORTHO05D000001 2.3e-06 55.8 82 35.4
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.3e-06 55.8 76 35.5
Nitab4.5_0003104g0060 Nicotiana tabacum HOM05D000097 ORTHO05D000041 2.3e-06 55.8 67 44.8
Rhsim05G0057200 Rhododendron simsii HOM05D000097 ORTHO05D000041 2.3e-06 55.8 45 48.9
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-06 55.8 84 32.1
Rhsim02G0235900 Rhododendron simsii HOM05D000097 ORTHO05D000041 3.0e-06 55.5 74 35.1
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 3.0e-06 55.5 77 39.0
HanXRQChr16g0512561 Helianthus annuus HOM05D000097 ORTHO05D000041 3.9e-06 55.1 76 36.8
PSO541G5397 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-06 55.1 75 30.7
Lsat_1_v5_gn_6_85720 Lactuca sativa HOM05D000097 ORTHO05D000041 5.1e-06 54.7 85 32.9
Peaxi162Scf00226g00936 Petunia axillaris HOM05D000097 ORTHO05D000041 5.1e-06 54.7 74 40.5
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 5.1e-06 54.7 79 38.0
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 5.1e-06 54.7 75 32.0
Lsat_1_v5_gn_1_85600 Lactuca sativa HOM05D000097 ORTHO05D000041 6.7e-06 54.3 81 30.9
Rhsim03G0046600 Rhododendron simsii HOM05D000097 ORTHO05D000041 6.7e-06 54.3 58 46.6
Lsat_1_v5_gn_4_140740 Lactuca sativa HOM05D000097 ORTHO05D000041 8.7e-06 53.9 68 44.1
Peaxi162Scf00226g00820 Petunia axillaris HOM05D000097 ORTHO05D000041 8.7e-06 53.9 87 35.6
RcHm_v2.0_Chr1g0326351 Rosa chinensis HOM05D000067 ORTHO05D000097 8.7e-06 53.9 79 35.4


User provided reference genes

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