Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6P359T27 Lonicera japonica HOM05D000003 ORTHO05D000007 6.2e-57 223.8 104 100.0
Lj6P362T25 Lonicera japonica HOM05D000003 ORTHO05D000007 2.8e-41 171.8 99 82.8
Lj3P600T11 Lonicera japonica HOM05D000003 ORTHO05D000007 2.5e-26 122.1 73 78.1
Lju414C0T9 Lonicera japonica HOM05D000003 ORTHO05D000007 5.7e-18 94.4 62 72.6
Lj4P731T46 Lonicera japonica HOM05D000003 ORTHO05D000007 1.4e-16 89.7 77 51.9
Lj2A394G31 Lonicera japonica HOM05D000003 ORTHO05D000007 1.0e-14 83.6 55 67.3
Lj3A1025T53 Lonicera japonica HOM05D000003 ORTHO05D000007 6.5e-14 80.9 79 49.4
Lj7P476T48 Lonicera japonica HOM05D000003 ORTHO05D000007 8.5e-14 80.5 66 53.0
Dinv05825 Davidia involucrata HOM05D000003 ORTHO05D000007 1.9e-13 79.3 72 47.2
Lj1P737T40 Lonicera japonica HOM05D000003 ORTHO05D000007 2.5e-13 79.0 64 53.1
Dinv01507 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-13 77.4 72 47.2
Dinv02876 Davidia involucrata HOM05D000003 ORTHO05D000007 7.2e-13 77.4 99 37.4
Lju114C3T14 Lonicera japonica HOM05D000003 ORTHO05D000007 7.2e-13 77.4 65 55.4
Dinv00381 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-12 73.9 85 41.2
Dinv15042 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-12 73.9 85 41.2
Dinv36847 Davidia involucrata HOM05D000003 ORTHO05D000007 7.9e-12 73.9 82 37.8
Dinv00628 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-11 73.6 78 39.7
Dinv04769 Davidia involucrata HOM05D000003 ORTHO05D000007 1.0e-11 73.6 89 38.2
Dinv19970 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-11 73.2 74 41.9
Dinv01737 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-11 72.8 83 41.0
Dinv18316 Davidia involucrata HOM05D000003 ORTHO05D000007 2.3e-11 72.4 67 44.8
Dinv03581 Davidia involucrata HOM05D000003 ORTHO05D000007 3.0e-11 72.0 86 39.5
Dinv22485 Davidia involucrata HOM05D000003 ORTHO05D000007 3.0e-11 72.0 90 36.7
Dinv29314 Davidia involucrata HOM05D000003 ORTHO05D000004 3.0e-11 72.0 59 49.2
Dinv10031 Davidia involucrata HOM05D000003 ORTHO05D000007 8.8e-11 70.5 80 38.8
Dinv04798 Davidia involucrata HOM05D000132 ORTHO05D000058 1.1e-10 70.1 68 42.6
Dinv08476 Davidia involucrata HOM05D000003 ORTHO05D000007 1.1e-10 70.1 78 34.6
Dinv18035 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-10 70.1 63 47.6
Dinv21537 Davidia involucrata HOM05D000003 ORTHO05D000006 1.1e-10 70.1 86 38.4
Dinv25409 Davidia involucrata HOM05D000003 ORTHO05D000007 1.1e-10 70.1 83 41.0
Dinv10915 Davidia involucrata HOM05D000003 ORTHO05D000007 1.5e-10 69.7 68 44.1
Dinv23891 Davidia involucrata HOM05D000003 ORTHO05D000006 2.5e-10 68.9 69 42.0
Dinv02105 Davidia involucrata HOM05D000003 ORTHO05D000007 4.3e-10 68.2 66 43.9
Dinv21508 Davidia involucrata HOM05D000003 ORTHO05D000007 4.3e-10 68.2 65 44.6
Dinv25289 Davidia involucrata HOM05D000003 ORTHO05D000007 4.3e-10 68.2 86 38.4
Dinv05257 Davidia involucrata HOM05D000003 ORTHO05D000007 5.7e-10 67.8 83 37.3
Dinv07777 Davidia involucrata HOM05D000003 ORTHO05D000007 5.7e-10 67.8 83 37.3
CANSAT25G1919 Cannabis sativa HOM05D000003 ORTHO05D000006 7.4e-10 67.4 87 40.2
Dinv40971 Davidia involucrata HOM05D000003 ORTHO05D000007 7.4e-10 67.4 83 36.1
Dinv12308 Davidia involucrata HOM05D000003 ORTHO05D000007 9.7e-10 67.0 83 38.6
Dinv13806 Davidia involucrata HOM05D000097 ORTHO05D000007 9.7e-10 67.0 68 45.6
CANSAT11G1599 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-09 66.6 94 39.4
CANSAT56G3660 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-09 66.6 86 33.7
Dinv16490 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-09 66.6 78 37.2
Dinv20159 Davidia involucrata HOM05D000041 ORTHO05D000007 1.3e-09 66.6 65 41.5
Dinv01133 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-09 66.2 83 38.6
Dinv19318 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-09 66.2 63 42.9
Dinv20583 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-09 66.2 66 39.4
Dinv39770 Davidia involucrata HOM05D000003 ORTHO05D000007 2.2e-09 65.9 92 34.8
Dinv06322 Davidia involucrata HOM05D000003 ORTHO05D000007 2.8e-09 65.5 63 41.3
Dinv01641 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-09 65.1 65 41.5
Dinv12306 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-09 65.1 68 36.8
Dinv13615 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-09 65.1 66 39.4
Dinv37987 Davidia involucrata HOM05D000633 ORTHO05D000477 3.7e-09 65.1 63 39.7
Dinv18497 Davidia involucrata HOM05D000003 ORTHO05D000007 6.3e-09 64.3 68 42.6
CANSAT80G0617 Cannabis sativa HOM05D000003 ORTHO05D000007 8.2e-09 63.9 97 36.1
Dinv11372 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-09 63.9 67 41.8
Dinv17303 Davidia involucrata HOM05D000003 ORTHO05D000007 8.2e-09 63.9 96 32.3
Rhsim11G0071500 Rhododendron simsii HOM05D001245 ORTHO05D004475 1.1e-08 63.5 102 30.4
Dinv00142 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-08 63.2 108 33.3
Dinv25826 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-08 63.2 65 40.0
Dinv25855 Davidia involucrata HOM05D000003 ORTHO05D000007 1.4e-08 63.2 81 38.3
Dinv40373 Davidia involucrata HOM05D000018 ORTHO05D001920 1.4e-08 63.2 61 39.3
Dinv00809 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 62.8 73 37.0
Dinv10465 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 62.8 87 34.5
Dinv11312 Davidia involucrata HOM05D000097 ORTHO05D000041 1.8e-08 62.8 65 40.0
Dinv33539 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 62.8 59 40.7
Rhsim06G0120300 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.8e-08 62.8 63 46.0
Dinv05828 Davidia involucrata HOM05D000003 ORTHO05D000007 2.4e-08 62.4 65 40.0
Rhsim04G0160400 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.4e-08 62.4 66 43.9
Aqoxy4G01339 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.1e-08 62.0 92 35.9
Dinv07128 Davidia involucrata HOM05D059363 ORTHO05D045095 4.1e-08 61.6 65 40.0
Dinv18722 Davidia involucrata HOM05D000003 ORTHO05D000007 4.1e-08 61.6 58 37.9
Dinv26734 Davidia involucrata HOM05D000003 ORTHO05D000007 4.1e-08 61.6 63 41.3
Dinv11134 Davidia involucrata HOM05D000003 ORTHO05D000007 5.3e-08 61.2 65 43.1
Dinv12387 Davidia involucrata HOM05D000003 ORTHO05D000007 6.9e-08 60.8 65 43.1
Rhsim11G0011200 Rhododendron simsii HOM05D000003 ORTHO05D000007 6.9e-08 60.8 75 37.3
Dinv01975 Davidia involucrata HOM05D000003 ORTHO05D000007 9.1e-08 60.5 94 29.8
Lj4P7T72 Lonicera japonica HOM05D000003 ORTHO05D000007 9.1e-08 60.5 69 36.2
Dinv02631 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-07 60.1 68 33.8
Dinv03080 Davidia involucrata HOM05D000003 ORTHO05D000007 1.2e-07 60.1 106 34.0
CANSAT35G1349 Cannabis sativa HOM05D000003 ORTHO05D000006 1.5e-07 59.7 74 39.2
Dinv07781 Davidia involucrata HOM05D000003 ORTHO05D000007 1.5e-07 59.7 63 36.5
PGSC0003DMG400035713 Solanum tuberosum HOM05D000003 ORTHO05D000007 1.5e-07 59.7 84 35.7
Dinv34972 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 58.9 81 37.0
Potri.017G002501 Populus trichocarpa HOM05D000003 ORTHO05D000007 3.4e-07 58.5 65 44.6
Actinidia35882 Actinidia chinensis HOM05D000003 ORTHO05D000007 4.5e-07 58.2 104 31.7
CANSAT64G2710 Cannabis sativa HOM05D000003 ORTHO05D000007 4.5e-07 58.2 88 34.1
Dinv02316 Davidia involucrata HOM05D000003 ORTHO05D000007 4.5e-07 58.2 58 43.1
Dinv10242 Davidia involucrata HOM05D000003 ORTHO05D000007 4.5e-07 58.2 82 37.8
Dinv16530 Davidia involucrata HOM05D000003 ORTHO05D000007 4.5e-07 58.2 65 40.0
Dinv04900 Davidia involucrata HOM05D000003 ORTHO05D000007 5.9e-07 57.8 65 38.5
Rhsim05G0103400 Rhododendron simsii HOM05D002233 ORTHO05D000007 5.9e-07 57.8 61 44.3
SHI55058 Sapria himalayana HOM05D000003 ORTHO05D000007 5.9e-07 57.8 53 43.4
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 7.7e-07 57.4 86 37.2
SHI53620 Sapria himalayana HOM05D000003 ORTHO05D000007 7.7e-07 57.4 59 39.0
SHI55127 Sapria himalayana HOM05D000003 ORTHO05D000007 7.7e-07 57.4 59 39.0
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 1.0e-06 57.0 73 37.0
Haze_10799 Corylus avellana HOM05D000216 ORTHO05D000634 1.0e-06 57.0 68 42.6
Rhsim04G0249700 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.0e-06 57.0 97 33.0
Rhsim10G0198700 Rhododendron simsii HOM05D000347 ORTHO05D000007 1.0e-06 57.0 63 42.9
Rhsim12G0177600 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.0e-06 57.0 74 39.2
Actinidia13099 Actinidia chinensis HOM05D000003 ORTHO05D000007 1.3e-06 56.6 69 40.6
Dinv01877 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 56.6 83 39.8
Dinv13780 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 56.6 59 45.8
Dinv44146 Davidia involucrata HOM05D000003 ORTHO05D000007 1.3e-06 56.6 73 38.4
Potri.017G002400 Populus trichocarpa HOM05D000003 ORTHO05D000007 1.3e-06 56.6 65 44.6
Potri.017G002800 Populus trichocarpa HOM05D000003 ORTHO05D000007 1.3e-06 56.6 65 44.6
Rhsim04G0149900 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.3e-06 56.6 71 39.4
Rhsim04G0192900 Rhododendron simsii HOM05D000003 ORTHO05D000007 1.3e-06 56.6 65 44.6
SHI14030 Sapria himalayana HOM05D000003 ORTHO05D000007 1.3e-06 56.6 68 36.8
CANSAT21G0417 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-06 56.2 85 32.9
Aqoxy1G03862 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 2.2e-06 55.8 74 37.8
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-06 55.8 86 33.7
EL10Ac6g13827 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-06 55.8 97 34.0
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 2.2e-06 55.8 73 35.6
Rhsim03G0101000 Rhododendron simsii HOM05D000003 ORTHO05D000007 2.2e-06 55.8 60 40.0
Rhsim06G0010400 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.2e-06 55.8 59 44.1
BolC6t37720H Brassica oleracea HOM05D000848 ORTHO05D003342 2.9e-06 55.5 53 39.6
Solyc11g062160.1 Solanum lycopersicum HOM05D000003 ORTHO05D000007 2.9e-06 55.5 100 28.0
Aqoxy2G01660 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 3.8e-06 55.1 65 40.0
Dinv39595 Davidia involucrata HOM05D000003 ORTHO05D000007 3.8e-06 55.1 79 38.0
Thhalv10019627m.g Eutrema salsugineum HOM05D000848 ORTHO05D003342 3.8e-06 55.1 58 43.1
Sabra17G0006400 Salix brachista HOM05D000003 ORTHO05D000007 3.8e-06 55.1 65 43.1
Aqoxy1G01841 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.0e-06 54.7 64 37.5
Aqoxy1G02043 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 5.0e-06 54.7 66 40.9
Aqoxy4G01395 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 5.0e-06 54.7 66 40.9
CANSAT25G2713 Cannabis sativa HOM05D000003 ORTHO05D000007 5.0e-06 54.7 74 36.5
Rhsim04G0136500 Rhododendron simsii HOM05D000003 ORTHO05D000007 5.0e-06 54.7 61 39.3
Rhsim04G0152900 Rhododendron simsii HOM05D000003 ORTHO05D000007 5.0e-06 54.7 61 42.6
CANSAT80G1054 Cannabis sativa HOM05D000003 ORTHO05D000007 6.5e-06 54.3 86 34.9
Carub.0004s1662 Capsella rubella HOM05D000848 ORTHO05D003342 6.5e-06 54.3 88 36.4
Dinv02967 Davidia involucrata HOM05D000003 ORTHO05D000006 6.5e-06 54.3 49 46.9
Dinv02179 Davidia involucrata HOM05D000003 ORTHO05D000007 8.5e-06 53.9 53 41.5
ECA232G3453 Erigeron canadensis HOM05D000003 ORTHO05D000004 8.5e-06 53.9 73 38.4


User provided reference genes

Program Settings