Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6E622T1 Lonicera japonica HOM05D004442 ORTHO05D002066 7.4e-50 200.3 105 100.0
Dinv29808 Davidia involucrata HOM05D004442 ORTHO05D002066 5.2e-19 97.8 100 53.0
Dinv27108 Davidia involucrata HOM05D004442 ORTHO05D002066 9.8e-18 93.6 100 51.0
Hma1.2p1_0112F.1_g054670 Hydrangea macrophylla HOM05D004442 ORTHO05D002066 4.5e-15 84.7 100 49.0
Atru.chr4.1928 Acer truncatum HOM05D004442 ORTHO05D002066 9.8e-10 67.0 106 39.6
Oeu002937.1 Olea europaea HOM05D004442 ORTHO05D002066 9.8e-10 67.0 100 37.0
Actinidia20837 Actinidia chinensis HOM05D004442 ORTHO05D002066 1.7e-09 66.2 121 35.5
CSS0038922 Camellia sinensis var. sinensis HOM05D004442 ORTHO05D002066 2.2e-09 65.9 101 39.6
vmacro08550 Vaccinium macrocarpon HOM05D004442 ORTHO05D002066 2.8e-09 65.5 100 39.0
Haze_11452 Corylus avellana HOM05D004442 ORTHO05D002066 3.7e-09 65.1 107 35.5
GSVIVG01027909001 Vitis vinifera HOM05D004442 ORTHO05D002066 6.3e-09 64.3 106 43.4
Thecc.04G263200 Theobroma cacao HOM05D004442 ORTHO05D002066 8.3e-09 63.9 107 38.3
QL06p020863 Quercus lobata HOM05D004442 ORTHO05D002066 1.8e-08 62.8 106 41.5
Oeu043422.1 Olea europaea HOM05D004442 ORTHO05D002066 2.4e-08 62.4 100 37.0
Ciclev10004536m.g Citrus clementina HOM05D004442 ORTHO05D002066 3.1e-08 62.0 106 40.6
Rhsim04G0172800 Rhododendron simsii HOM05D004442 ORTHO05D002066 3.1e-08 62.0 100 37.0
CAN.G220.77 Capsicum annuum HOM05D004442 ORTHO05D002066 7.0e-08 60.8 107 40.2
Sabra10G0041000 Salix brachista HOM05D004442 ORTHO05D002066 9.2e-08 60.5 105 37.1
PGSC0003DMG400017149 Solanum tuberosum HOM05D004442 ORTHO05D002066 1.2e-07 60.1 90 40.0
Solyc09g090640.3 Solanum lycopersicum HOM05D004442 ORTHO05D002066 1.6e-07 59.7 96 39.6
Actinidia35814 Actinidia chinensis HOM05D004442 ORTHO05D002066 2.0e-07 59.3 100 38.0
TWI73G0593 Tripterygium wilfordii HOM05D004442 ORTHO05D002066 2.0e-07 59.3 105 35.2
Gohir.A10G109132 Gossypium hirsutum HOM05D004442 ORTHO05D002066 1.0e-06 57.0 106 32.1
TWI09G0742 Tripterygium wilfordii HOM05D004442 ORTHO05D002066 1.0e-06 57.0 106 37.7
Gorai.011G178400 Gossypium raimondii HOM05D004442 ORTHO05D002066 1.3e-06 56.6 106 32.1
Manes.03G159700 Manihot esculenta HOM05D004442 ORTHO05D002066 1.3e-06 56.6 107 40.2
Potri.010G066200 Populus trichocarpa HOM05D004442 ORTHO05D002066 1.3e-06 56.6 105 35.2
Sopen09g033580 Solanum pennellii HOM05D004442 ORTHO05D002066 1.3e-06 56.6 96 37.5
Potri.008G171400 Populus trichocarpa HOM05D004442 ORTHO05D002066 1.7e-06 56.2 105 34.3
Eucgr.H02958 Eucalyptus grandis HOM05D004442 ORTHO05D002066 2.3e-06 55.8 103 34.0
Gohir.D10G158800 Gossypium hirsutum HOM05D004442 ORTHO05D002066 2.3e-06 55.8 106 32.1
MD16G1225600 Malus domestica HOM05D004442 ORTHO05D002066 2.3e-06 55.8 106 37.7
Prupe.1G047300 Prunus persica HOM05D004442 ORTHO05D002066 2.9e-06 55.5 106 35.8
Cc03_g06240 Coffea canephora HOM05D004442 ORTHO05D002066 5.0e-06 54.7 92 39.1
Gohir.A09G227700 Gossypium hirsutum HOM05D004442 ORTHO05D002066 8.6e-06 53.9 103 35.9
TAR636G2240 Trochodendron aralioides HOM05D004442 ORTHO05D002066 8.6e-06 53.9 106 32.1


User provided reference genes

Program Settings