Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C818G9 Lonicera japonica HOM05D002970 ORTHO05D009571 7.8e-175 617.1 324 100.0
CSS0013806 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 1.4e-94 350.5 308 62.7
GSVIVG01010294001 Vitis vinifera HOM05D002970 ORTHO05D009571 3.2e-91 339.3 307 61.2
Cc11_g16280 Coffea canephora HOM05D002970 ORTHO05D009571 3.4e-85 319.3 302 57.0
Prupe.1G238700 Prunus persica HOM05D002970 ORTHO05D009571 4.4e-85 318.9 310 58.7
QL03p055861 Quercus lobata HOM05D002970 ORTHO05D009571 2.4e-83 313.2 277 62.8
MD16G1107600 Malus domestica HOM05D002970 ORTHO05D009571 1.6e-82 310.5 288 60.1
CiPaw.05G175600 Carya illinoinensis HOM05D002970 ORTHO05D009571 6.0e-82 308.5 307 58.3
MBI11_g24187_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 1.0e-81 307.8 263 65.0
Nitab4.5_0002688g0010 Nicotiana tabacum HOM05D002970 ORTHO05D009571 3.9e-81 305.8 303 56.8
Duzib248G1026 Durio zibethinus HOM05D002970 ORTHO05D009571 6.6e-81 305.1 252 66.3
Ciclev10032228m.g Citrus clementina HOM05D002970 ORTHO05D009571 1.5e-80 303.9 259 65.3
Nitab4.5_0000041g0260 Nicotiana tabacum HOM05D002970 ORTHO05D009571 1.5e-80 303.9 303 56.4
Manes.12G018300 Manihot esculenta HOM05D002970 ORTHO05D009571 4.7e-79 298.9 285 59.6
CAN.G49.8 Capsicum annuum HOM05D002970 ORTHO05D009571 2.3e-78 296.6 302 56.6
CANSAT01G2975 Cannabis sativa HOM05D002970 ORTHO05D009571 5.2e-78 295.4 309 56.6
FvH4_4g24960 Fragaria vesca HOM05D002970 ORTHO05D009571 1.2e-77 294.3 292 56.8
PGSC0003DMG400010736 Solanum tuberosum HOM05D002970 ORTHO05D009571 2.0e-77 293.5 275 58.5
ECA234G3025 Erigeron canadensis HOM05D002970 ORTHO05D009571 3.4e-77 292.7 277 58.8
FAN12G3280 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.4e-77 292.4 292 56.8
Atru.chr11.2205 Acer truncatum HOM05D002970 ORTHO05D009571 5.8e-77 292.0 277 60.6
RcHm_v2.0_Chr4g0432001 Rosa chinensis HOM05D002970 ORTHO05D009571 5.8e-77 292.0 307 55.4
HanXRQChr17g0569221 Helianthus annuus HOM05D002970 ORTHO05D009571 1.7e-76 290.4 267 59.6
Lsat_1_v5_gn_4_2440 Lactuca sativa HOM05D000799 ORTHO05D009571 3.7e-76 289.3 254 62.2
COL.COLO4_23553 Corchorus olitorius HOM05D002970 ORTHO05D007037 1.1e-75 287.7 254 63.0
Atru.BG.282.p Acer truncatum HOM05D002970 ORTHO05D009571 1.9e-75 287.0 190 77.9
Ca_17805_v3 Cicer arietinum L. HOM05D002970 ORTHO05D009571 1.9e-75 287.0 208 71.6
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.9e-75 287.0 295 57.3
Sopen05g009220 Solanum pennellii HOM05D002970 ORTHO05D009571 3.2e-75 286.2 275 57.5
FAN17G2692 Fragaria x ananassa HOM05D002970 ORTHO05D009571 4.1e-75 285.8 272 59.2
Phvul.002G257900 Phaseolus vulgaris HOM05D002970 ORTHO05D009571 4.1e-75 285.8 207 71.5
TAR371G0312 Trochodendron aralioides HOM05D002970 ORTHO05D007037 4.1e-75 285.8 296 53.7
Potri.008G181400 Populus trichocarpa HOM05D002970 ORTHO05D009571 1.6e-74 283.9 296 55.4
EL10Ac6g15186 Beta vulgaris HOM05D002970 ORTHO05D009571 2.1e-74 283.5 305 54.8
Thecc.02G269300 Theobroma cacao HOM05D002970 ORTHO05D009571 2.1e-74 283.5 301 54.2
MELO3C010711.2 Cucumis melo HOM05D002970 ORTHO05D009571 3.5e-74 282.7 309 55.7
Gorai.009G334200 Gossypium raimondii HOM05D002970 ORTHO05D009571 6.0e-74 282.0 301 55.5
Lalb_Chr07g0185611 Lupinus albus HOM05D002970 ORTHO05D009571 1.3e-73 280.8 202 72.8
CsaV3_2G025140 Cucumis sativus L. HOM05D002970 ORTHO05D009571 1.7e-73 280.4 309 55.0
Aqoxy5G03608 Aquilegia oxysepala HOM05D002970 ORTHO05D009571 8.6e-73 278.1 261 57.9
Peaxi162Scf00128g00724 Petunia axillaris HOM05D002970 ORTHO05D009571 1.2e-71 274.2 287 55.4
vmacro16152 Vaccinium macrocarpon HOM05D002970 ORTHO05D009571 4.7e-71 272.3 318 50.9
Gohir.A05G311600 Gossypium hirsutum HOM05D002970 ORTHO05D009571 1.1e-70 271.2 242 61.6
Medtr8g089550 Medicago truncatula HOM05D002970 ORTHO05D009571 1.1e-70 271.2 207 68.1
TPR.G6253 Trifolium pratense HOM05D002970 ORTHO05D009571 1.1e-70 271.2 207 69.6
arahy.Tifrunner.gnm1.ann1.4Z4H5J Arachis hypogaea HOM05D002970 ORTHO05D009571 5.2e-70 268.9 191 75.4
Thhalv10004665m.g Eutrema salsugineum HOM05D002970 ORTHO05D009571 5.2e-70 268.9 271 54.2
arahy.Tifrunner.gnm1.ann1.C1FJC6 Arachis hypogaea HOM05D002970 ORTHO05D009571 6.8e-70 268.5 191 74.9
THA.LOC104825684 Tarenaya hassleriana HOM05D002970 ORTHO05D009571 2.0e-69 266.9 252 56.7
Psat7g060120 Pisum sativum HOM05D002970 ORTHO05D009571 3.7e-68 262.7 207 66.7
PGR102G3027 Punica granatum HOM05D002970 ORTHO05D009571 4.9e-68 262.3 252 59.9
Eucgr.B03232 Eucalyptus grandis HOM05D002970 ORTHO05D009571 8.3e-68 261.5 305 52.5
SalBow2G2585 Salvia bowleyana HOM05D002970 ORTHO05D009571 8.3e-68 261.5 211 65.9
Sabra08G0138400 Salix brachista HOM05D000799 ORTHO05D000629 1.1e-67 261.2 273 55.3
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.4e-67 260.0 307 50.8
ATR0824G068 Amborella trichopoda HOM05D002970 ORTHO05D009571 4.6e-66 255.8 255 55.3
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 6.0e-66 255.4 253 56.1
AL5G14780 Arabidopsis lyrata HOM05D002970 ORTHO05D009571 7.8e-66 255.0 303 49.8
Carub.0005s0396 Capsella rubella HOM05D002970 ORTHO05D009571 1.7e-65 253.8 254 55.1
AUR62005542 Chenopodium quinoa HOM05D002970 ORTHO05D009571 1.7e-65 253.8 305 50.5
AT3G26085 Arabidopsis thaliana HOM05D002970 ORTHO05D009571 2.3e-65 253.4 254 55.9
PSO782G2321 Papaver somniferum HOM05D002970 ORTHO05D009571 3.9e-65 252.7 189 66.7
Sp2g15280 Schrenkiella parvula HOM05D002970 ORTHO05D009571 3.9e-65 252.7 253 54.9
Nn4g22479 Nelumbo nucifera HOM05D002970 ORTHO05D009571 6.6e-65 251.9 247 57.9
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 1.1e-64 251.1 253 54.9
BcaC06g33929 Brassica carinata HOM05D002970 ORTHO05D009571 1.1e-64 251.1 253 54.9
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 3.3e-64 249.6 252 56.3
BcaC06g31093 Brassica carinata HOM05D002970 ORTHO05D009571 5.6e-64 248.8 253 55.7
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 5.6e-64 248.8 254 55.5
CARHR147070 Cardamine hirsuta HOM05D002970 ORTHO05D009571 9.6e-64 248.1 259 54.1
Hund25423 Selenicereus undatus HOM05D002970 ORTHO05D009571 2.4e-62 243.4 258 56.2
Zm00001eb406400 Zea mays HOM05D002970 ORTHO05D009571 7.6e-61 238.4 251 50.2
PSO063G2167 Papaver somniferum HOM05D002970 ORTHO05D009571 2.9e-60 236.5 228 57.0
CDE02G1212 Ceratophyllum demersum HOM05D002970 ORTHO05D009571 6.4e-60 235.3 259 51.4
Solyc05g014190.4 Solanum lycopersicum HOM05D002970 ORTHO05D009571 1.1e-59 234.6 245 55.5
AUR62024190 Chenopodium quinoa HOM05D002970 ORTHO05D007037 2.4e-59 233.4 246 54.1
Lj4g0006456 Lotus japonicus HOM05D002970 ORTHO05D009571 9.3e-59 231.5 217 60.4
Gohir.D05G312700 Gossypium hirsutum HOM05D002970 ORTHO05D009571 3.5e-58 229.6 253 54.5
TWI36G0308 Tripterygium wilfordii HOM05D002970 ORTHO05D009571 3.5e-58 229.6 247 54.3
HPP92_024537 Vanilla planifolia HOM05D002970 ORTHO05D009571 2.5e-56 223.4 254 49.6
Migut.K00672 Erythranthe guttata HOM05D002970 ORTHO05D009571 1.3e-55 221.1 258 51.6
MD13G1107700 Malus domestica HOM05D002970 ORTHO05D009571 1.1e-54 218.0 256 53.5
ClCG08G017480 Citrullus lanatus HOM05D002970 ORTHO05D009571 1.4e-54 217.6 346 46.2
Cpa.g.sc86.6 Carica papaya HOM05D002970 ORTHO05D009571 1.3e-49 201.1 353 39.7
Aa31LG2G6280 Aethionema arabicum HOM05D002970 ORTHO05D009571 1.9e-48 197.2 258 49.2
unitig_749.g13282 Utricularia gibba HOM05D002970 ORTHO05D009571 8.1e-47 191.8 133 69.2
Dinv14770 Davidia involucrata HOM05D002970 ORTHO05D009571 2.4e-43 180.3 207 52.7
Pp3c24_16920 Physcomitrium patens HOM05D002970 ORTHO05D009571 1.9e-40 170.6 291 36.8
AagrBONN_evm.TU.Sc2ySwM_344.962 Anthoceros agrestis HOM05D002970 ORTHO05D009571 5.3e-38 162.5 290 36.2
Mapoly0082s0035 Marchantia polymorpha HOM05D002970 ORTHO05D009571 6.9e-38 162.2 225 40.4
Sed0000980 Sechium edule HOM05D002970 ORTHO05D009571 1.7e-36 157.5 131 64.9
MSTRG.542 Avicennia marina HOM05D002970 ORTHO05D009571 1.0e-33 148.3 164 50.6
Glyma.05G172100 Glycine max HOM05D002970 ORTHO05D009571 1.3e-33 147.9 130 59.2
DCAR_007026 Daucus carota HOM05D002970 ORTHO05D007037 1.8e-33 147.5 206 47.1
SMO365G0071 Selaginella moellendorffii HOM05D002970 ORTHO05D009571 3.0e-33 146.7 237 38.8
CSS0042994 Camellia sinensis var. sinensis HOM05D002970 ORTHO05D009571 3.2e-27 126.7 83 73.5
CBR_g20339 Chara braunii HOM05D002970 ORTHO05D009571 9.7e-24 115.2 160 40.0
PRCOL_00001586 Prasinoderma coloniale HOM05D002970 ORTHO05D009571 1.0e-20 105.1 201 32.8
arahy.Tifrunner.gnm1.ann1.WDY3XU Arachis hypogaea HOM05D002970 ORTHO05D009571 1.4e-19 101.3 164 45.1
Cre12.g556150 Chlamydomonas reinhardtii HOM05D002970 ORTHO05D009571 2.5e-19 100.5 188 35.6
MCO09G664 Micromonas commoda HOM05D002970 ORTHO05D009571 1.0e-17 95.1 114 43.0
Glyma.06G231900 Glycine max HOM05D002970 ORTHO05D009571 1.3e-15 88.2 62 69.4
SEGI_41532 Sequoiadendron giganteum HOM05D031330 ORTHO05D009571 1.2e-13 81.6 179 33.5
CiPaw.11G163100 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.9e-12 77.0 153 42.5
CiPaw.09G014900 Carya illinoinensis HOM05D002970 ORTHO05D009571 2.7e-10 70.5 132 43.9
MBI11_g22623_MAGBIO Magnolia biondii HOM05D002970 ORTHO05D009571 2.7e-10 70.5 82 51.2


User provided reference genes

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