Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 3.5e-169 598.2 302 100.0
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 1.4e-120 436.8 290 76.9
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 1.0e-112 410.6 297 72.7
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 2.3e-112 409.5 306 70.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.1e-111 407.1 295 70.2
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.5e-111 406.8 296 70.3
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 4.8e-110 401.7 295 69.5
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.4e-109 400.2 299 70.2
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 7.0e-109 397.9 294 70.4
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 2.6e-108 396.0 297 70.0
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 4.5e-108 395.2 295 70.5
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 5.9e-108 394.8 293 70.6
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.3e-107 393.7 300 67.0
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-107 392.9 299 70.6
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.2e-107 392.9 299 70.9
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 2.9e-107 392.5 294 70.1
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 3.8e-107 392.1 291 69.4
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 1.1e-106 390.6 296 66.9
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 1.5e-106 390.2 291 69.8
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 3.2e-106 389.0 295 67.5
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 3.2e-106 389.0 292 69.9
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 4.2e-106 388.7 292 69.5
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 5.5e-106 388.3 302 67.2
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 7.2e-106 387.9 292 68.8
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 9.4e-106 387.5 299 68.9
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 1.2e-105 387.1 301 69.8
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 1.6e-105 386.7 300 70.0
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 2.1e-105 386.3 302 69.9
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 2.7e-105 386.0 308 68.2
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 8.0e-105 384.4 297 69.7
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 2.3e-104 382.9 295 66.1
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 8.8e-104 380.9 292 68.5
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 5.7e-103 378.3 295 65.4
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 5.7e-103 378.3 252 74.2
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.7e-103 378.3 297 67.7
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 5.7e-103 378.3 297 67.7
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 5.7e-103 378.3 297 66.0
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 7.4e-103 377.9 305 64.6
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 1.3e-102 377.1 292 67.8
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.7e-102 376.7 311 66.6
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 3.7e-102 375.6 264 72.0
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-101 374.0 293 65.9
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.8e-101 373.2 303 63.7
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.1e-101 372.1 294 65.6
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 5.3e-101 371.7 292 67.1
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 1.0e-99 367.5 296 66.9
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.7e-99 366.7 300 65.3
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 2.9e-99 365.9 274 69.0
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 5.0e-99 365.2 252 72.2
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.1e-98 364.0 296 66.6
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 2.5e-98 362.8 303 63.0
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 3.2e-98 362.5 275 67.6
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 5.5e-98 361.7 261 69.0
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 7.2e-98 361.3 298 62.8
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 7.2e-98 361.3 295 63.7
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 1.2e-97 360.5 261 69.7
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.2e-97 360.5 281 68.7
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 2.1e-97 359.8 305 62.6
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 3.6e-97 359.0 305 63.3
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.8e-96 356.7 293 62.8
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.0e-96 355.5 295 66.1
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 3.4e-95 352.4 293 63.5
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 9.8e-95 350.9 284 65.1
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 1.1e-93 347.4 282 67.4
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 3.1e-93 345.9 325 60.0
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 3.1e-93 345.9 293 62.8
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 4.1e-93 345.5 295 62.0
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 1.2e-92 344.0 263 70.0
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 4.5e-92 342.0 294 61.2
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 5.9e-92 341.7 267 65.9
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 5.0e-91 338.6 296 61.5
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 2.5e-90 336.3 293 60.8
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 4.2e-90 335.5 263 66.2
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.7e-89 332.8 303 60.1
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 2.7e-89 332.8 280 64.6
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 4.7e-89 332.0 265 63.0
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 1.4e-88 330.5 312 58.7
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 2.0e-87 326.6 323 56.7
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 3.7e-86 322.4 233 70.8
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 1.8e-85 320.1 278 62.9
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 9.1e-85 317.8 291 61.5
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.6e-84 317.0 273 61.2
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 5.9e-84 315.1 292 59.6
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 1.7e-83 313.5 265 62.3
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 4.7e-81 305.4 246 61.4
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.0e-80 304.3 248 62.5
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 1.0e-80 304.3 196 78.1
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.4e-80 303.9 272 59.2
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 1.8e-80 303.5 247 62.3
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 2.6e-79 299.7 266 58.6
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 9.8e-79 297.7 255 64.7
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 8.3e-78 294.7 271 59.4
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.9e-75 286.2 260 59.6
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.2e-73 280.8 213 68.1
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 2.9e-70 269.6 272 54.8
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 3.2e-69 266.2 186 69.9
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 4.4e-63 245.7 299 50.5
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 2.8e-57 226.5 236 50.8
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 2.8e-57 226.5 241 49.4
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 2.2e-54 216.9 253 44.7
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 2.6e-47 193.4 139 66.9
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 4.6e-44 182.6 289 41.5
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 2.8e-41 173.3 248 38.3
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 1.0e-35 154.8 233 35.2
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 9.6e-34 148.3 243 36.2
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.7e-30 137.5 89 73.0
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.1e-28 130.6 139 52.5
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 9.0e-24 115.2 84 63.1
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.1e-18 98.2 117 46.2
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 9.0e-16 88.6 97 48.5
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 3.8e-14 83.2 48 81.2
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 4.2e-13 79.7 116 46.6
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 4.2e-13 79.7 68 52.9
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 2.8e-09 67.0 57 59.6
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 2.8e-09 67.0 57 59.6
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 6.3e-09 65.9 57 59.6
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.4e-08 64.7 54 50.0
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.3e-08 62.8 73 45.2
Rhsim03G0260900 Rhododendron simsii HOM05D021265 ORTHO05D339689 7.7e-07 58.9 50 60.0


User provided reference genes

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