Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C730T14 Lonicera japonica HOM05D000179 ORTHO05D234027 2.4e-49 199.1 154 100.0
Manes.15G139200 Manihot esculenta HOM05D000179 ORTHO05D000107 1.4e-12 77.0 167 53.3
Atru.chr11.991 Acer truncatum HOM05D000179 ORTHO05D000107 1.8e-12 76.6 164 58.5
Cc11_g05630 Coffea canephora HOM05D000179 ORTHO05D000107 4.0e-12 75.5 139 61.9
Dinv20496 Davidia involucrata HOM05D000179 ORTHO05D000107 6.9e-12 74.7 163 55.2
Dinv20546 Davidia involucrata HOM05D000179 ORTHO05D000107 6.9e-12 74.7 163 55.2
CSS0005172 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 5.8e-11 71.6 165 54.5
CSS0010097 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 5.8e-11 71.6 165 54.5
Actinidia13744 Actinidia chinensis HOM05D000179 ORTHO05D000107 7.6e-11 71.2 157 53.5
CSS0034127 Camellia sinensis var. sinensis HOM05D000179 ORTHO05D000107 9.9e-11 70.9 174 51.7
Rhsim09G0084600 Rhododendron simsii HOM05D000179 ORTHO05D000107 1.3e-10 70.5 159 56.0
Nitab4.5_0000521g0010 Nicotiana tabacum HOM05D000179 ORTHO05D000107 1.7e-10 70.1 147 42.2
CiPaw.05G159500 Carya illinoinensis HOM05D000179 ORTHO05D000107 2.2e-10 69.7 172 40.7
GSVIVG01011587001 Vitis vinifera HOM05D000179 ORTHO05D000107 2.2e-10 69.7 146 54.1
TWI53G1503 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 3.8e-10 68.9 162 48.8
Actinidia20102 Actinidia chinensis HOM05D000179 ORTHO05D000107 4.9e-10 68.6 157 54.8
Potri.010G101200 Populus trichocarpa HOM05D000179 ORTHO05D000107 8.4e-10 67.8 176 49.4
Cfa022225 Carpinus fangiana HOM05D000179 ORTHO05D000107 1.1e-09 67.4 172 52.9
CiPaw.06G058100 Carya illinoinensis HOM05D000179 ORTHO05D000107 1.1e-09 67.4 166 46.4
Haze_10802 Corylus avellana HOM05D000179 ORTHO05D000107 1.1e-09 67.4 172 54.1
DCAR_030310 Daucus carota HOM05D000179 ORTHO05D000107 1.1e-09 67.4 160 36.2
Duzib251G0522 Durio zibethinus HOM05D000179 ORTHO05D000107 1.4e-09 67.0 168 49.4
Gohir.A03G113400 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.4e-09 66.2 164 48.8
Gorai.005G154300 Gossypium raimondii HOM05D000179 ORTHO05D000107 2.4e-09 66.2 164 48.8
QL03p039252 Quercus lobata HOM05D000179 ORTHO05D000107 2.4e-09 66.2 180 40.6
Ciclev10015315m.g Citrus clementina HOM05D000179 ORTHO05D000107 3.2e-09 65.9 172 49.4
Eucgr.G02066 Eucalyptus grandis HOM05D000179 ORTHO05D000107 4.2e-09 65.5 186 48.4
Nn4g24574 Nelumbo nucifera HOM05D000179 ORTHO05D000107 4.2e-09 65.5 190 47.4
Nitab4.5_0002202g0020 Nicotiana tabacum HOM05D000179 ORTHO05D000107 5.5e-09 65.1 147 42.2
Peaxi162Scf00033g02311 Petunia axillaris HOM05D000179 ORTHO05D000107 5.5e-09 65.1 182 34.1
Gohir.D02G137800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 7.1e-09 64.7 164 48.8
MBI13_g21684_MAGBIO Magnolia biondii HOM05D000179 ORTHO05D000107 7.1e-09 64.7 181 51.4
Aqoxy3G04054 Aquilegia oxysepala HOM05D000179 ORTHO05D000107 9.3e-09 64.3 192 48.4
Cpa.g.sc2.118 Carica papaya HOM05D000179 ORTHO05D000107 1.2e-08 63.9 160 59.4
COL.COLO4_27569 Corchorus olitorius HOM05D000179 ORTHO05D000107 1.2e-08 63.9 165 47.9
Sabra08G0106400 Salix brachista HOM05D000179 ORTHO05D000107 2.1e-08 63.2 171 48.5
Duzib248G1237 Durio zibethinus HOM05D000179 ORTHO05D000107 2.7e-08 62.8 168 51.2
Gohir.A12G153500 Gossypium hirsutum HOM05D000179 ORTHO05D000107 2.7e-08 62.8 148 57.4
Nn3g18479 Nelumbo nucifera HOM05D000179 ORTHO05D000107 2.7e-08 62.8 190 45.3
ECA233G0140 Erigeron canadensis HOM05D000179 ORTHO05D000107 4.6e-08 62.0 153 43.8
PSO063G1128 Papaver somniferum HOM05D000179 ORTHO05D000107 4.6e-08 62.0 193 45.6
PSO782G2107 Papaver somniferum HOM05D000179 ORTHO05D000107 4.6e-08 62.0 193 45.6
TWI74G0208 Tripterygium wilfordii HOM05D000179 ORTHO05D000107 4.6e-08 62.0 158 51.3
Gohir.D12G156800 Gossypium hirsutum HOM05D000179 ORTHO05D000107 6.0e-08 61.6 148 56.8
Gorai.008G169500 Gossypium raimondii HOM05D000179 ORTHO05D000107 6.0e-08 61.6 148 56.8
Thecc.02G302800 Theobroma cacao HOM05D000179 ORTHO05D000107 6.0e-08 61.6 168 39.3
Potri.008G140400 Populus trichocarpa HOM05D000179 ORTHO05D000107 7.9e-08 61.2 171 48.5
Duzib268G1689 Durio zibethinus HOM05D000179 ORTHO05D000107 1.3e-07 60.5 168 51.2
QL10p033398 Quercus lobata HOM05D000179 ORTHO05D000107 1.3e-07 60.5 49 59.2
Gohir.A01G145200 Gossypium hirsutum HOM05D000179 ORTHO05D000107 3.0e-07 59.3 153 52.3
Lsat_1_v5_gn_8_34221 Lactuca sativa HOM05D000179 ORTHO05D000107 3.9e-07 58.9 144 44.4
Manes.17G090100 Manihot esculenta HOM05D000179 ORTHO05D000107 3.9e-07 58.9 49 61.2
Gohir.D01G135100 Gossypium hirsutum HOM05D000179 ORTHO05D000107 5.1e-07 58.5 153 51.0
Gorai.002G171100 Gossypium raimondii HOM05D000179 ORTHO05D000107 5.1e-07 58.5 153 51.0
Potri.012G040200 Populus trichocarpa HOM05D000179 ORTHO05D000107 5.1e-07 58.5 49 61.2
HanXRQChr12g0366021 Helianthus annuus HOM05D000179 ORTHO05D000107 6.7e-07 58.2 142 44.4
Glyma.07G107500 Glycine max HOM05D000179 ORTHO05D000107 8.7e-07 57.8 47 55.3
Manes.06G001400 Manihot esculenta HOM05D000179 ORTHO05D000107 1.5e-06 57.0 49 61.2
Sabra10G0073800 Salix brachista HOM05D000179 ORTHO05D000107 1.5e-06 57.0 181 39.2
Manes.14G173800 Manihot esculenta HOM05D000179 ORTHO05D000107 1.9e-06 56.6 49 57.1
DCAR_002642 Daucus carota HOM05D000179 ORTHO05D000107 2.5e-06 56.2 181 29.8
ATR0598G149 Amborella trichopoda HOM05D000179 ORTHO05D000107 3.3e-06 55.8 49 61.2
CDE11G1049 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 3.3e-06 55.8 184 43.5
ECA234G2438 Erigeron canadensis HOM05D000179 ORTHO05D000107 3.3e-06 55.8 155 49.0
HanXRQChr08g0224321 Helianthus annuus HOM05D000179 ORTHO05D000107 3.3e-06 55.8 165 42.4
MD13G1015000 Malus domestica HOM05D000179 ORTHO05D000107 4.3e-06 55.5 57 56.1
HanXRQChr16g0527681 Helianthus annuus HOM05D000179 ORTHO05D000107 5.6e-06 55.1 152 48.0
Glyma.05G137000 Glycine max HOM05D000179 ORTHO05D000107 7.4e-06 54.7 41 61.0
RcHm_v2.0_Chr7g0177741 Rosa chinensis HOM05D000179 ORTHO05D000107 7.4e-06 54.7 49 59.2
Gorai.009G329200 Gossypium raimondii HOM05D000179 ORTHO05D000107 9.6e-06 54.3 155 51.0
Lsat_1_v5_gn_5_34921 Lactuca sativa HOM05D000179 ORTHO05D000107 9.6e-06 54.3 158 37.3


User provided reference genes

Program Settings