Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 0.0e+00 1442.6 802 100.0
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.4e-217 760.4 810 62.1
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 1.6e-197 693.7 805 57.6
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 4.0e-188 662.5 794 58.6
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 7.6e-171 605.1 832 51.7
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.3e-170 604.4 823 52.0
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 6.7e-167 592.0 815 51.8
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.8e-164 583.9 830 50.7
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 3.4e-163 579.7 781 52.2
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 3.4e-163 579.7 831 50.2
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.3e-162 577.8 830 50.2
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 6.5e-162 575.5 822 50.4
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 8.4e-162 575.1 831 51.1
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 1.2e-160 571.2 819 50.8
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 6.7e-159 565.5 718 55.2
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.1e-156 558.1 832 49.5
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 6.9e-156 555.4 881 49.0
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 1.2e-155 554.7 803 49.4
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 3.8e-154 549.7 877 47.3
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.9e-151 539.7 833 49.2
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.3e-149 534.6 803 49.6
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.7e-149 534.3 841 48.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.4e-148 531.2 829 48.3
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 4.5e-147 526.2 748 51.2
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 5.0e-146 522.7 756 51.2
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 8.8e-143 511.9 837 48.0
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 1.5e-142 511.1 788 48.7
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.2e-141 507.3 893 38.3
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 5.3e-140 502.7 830 46.5
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 3.5e-139 500.0 758 48.3
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 1.0e-138 498.4 819 47.4
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 2.2e-138 497.3 784 49.1
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 3.2e-137 493.4 835 46.3
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.2e-136 491.5 813 46.4
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 4.7e-136 489.6 682 49.4
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 6.7e-135 485.7 809 48.5
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.5e-134 484.6 848 45.5
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 3.7e-133 479.9 793 46.8
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 9.1e-132 475.3 785 47.6
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 3.5e-131 473.4 781 47.1
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 4.5e-131 473.0 769 47.9
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.3e-130 471.5 703 41.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 1.1e-129 468.4 780 48.3
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 1.1e-129 468.4 803 46.2
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.5e-129 468.0 768 46.9
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 6.1e-128 462.6 747 47.4
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.4e-127 461.5 815 46.3
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.3e-127 460.7 803 44.6
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 8.8e-127 458.8 705 49.4
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 3.4e-126 456.8 674 51.0
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 3.4e-126 456.8 723 48.7
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 5.7e-126 456.1 793 47.7
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 6.3e-125 452.6 725 45.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.4e-124 451.4 729 49.8
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.8e-124 451.1 830 43.5
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 2.0e-123 447.6 835 44.2
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.0e-122 445.3 794 47.1
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.9e-122 443.7 656 50.6
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.3e-119 434.1 696 48.9
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 4.4e-118 429.9 730 46.2
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 7.5e-118 429.1 770 46.1
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 3.1e-116 423.7 772 45.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.3e-114 418.3 677 48.2
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.7e-114 417.9 844 41.7
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.9e-114 417.2 775 45.5
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 6.6e-114 416.0 679 48.9
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 2.3e-111 407.5 747 44.7
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 3.7e-109 400.2 772 44.7
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 1.8e-108 397.9 770 44.3
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 1.6e-107 394.8 742 44.9
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 3.5e-107 393.7 748 37.0
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 1.0e-106 392.1 757 45.0
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 1.7e-106 391.3 737 44.6
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 8.6e-106 389.0 738 44.9
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 5.6e-105 386.3 770 43.4
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 2.3e-103 380.9 795 42.8
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.0e-98 365.5 482 45.2
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.7e-98 364.8 584 49.8
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 6.6e-98 362.8 599 47.9
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.9e-97 361.3 745 41.6
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 3.4e-94 350.5 654 46.2
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 7.1e-92 342.8 580 48.1
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 8.6e-90 335.9 610 47.4
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.1e-84 316.2 435 59.8
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 2.3e-82 311.2 746 41.0
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 6.6e-82 309.7 508 39.8
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.8e-80 304.3 635 35.7
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 3.4e-78 297.4 781 34.4
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 5.8e-78 296.6 628 43.5
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.3e-74 285.4 723 37.6
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 6.2e-72 276.6 317 53.0
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 9.0e-71 272.7 268 57.5
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.2e-70 272.3 271 54.2
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.9e-52 211.8 442 46.8
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 3.7e-48 197.6 193 57.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.4e-47 195.7 526 31.0
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 3.0e-42 177.9 411 46.5
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 6.7e-42 176.8 497 32.2
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 3.3e-33 147.9 199 46.7
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.1e-25 122.9 242 43.4
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 7.0e-23 113.6 387 29.5
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 6.5e-21 107.1 672 24.0
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 9.4e-20 103.2 202 40.1
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 1.2e-19 102.8 79 64.6
vmacro10766 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.6e-19 102.4 205 38.5
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.8e-18 99.0 66 72.7
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 6.7e-18 97.1 66 68.2
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 8.8e-18 96.7 77 61.0
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 2.8e-16 91.7 159 39.0
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 4.5e-14 84.3 118 48.3
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.9e-13 81.6 47 78.7
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 4.2e-12 77.8 82 50.0
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 3.4e-09 68.2 117 36.8
Haze_10728 Corylus avellana HOM05D063416 ORTHO05D034208 2.4e-07 62.0 121 39.7
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.6e-06 59.3 280 22.1
Ah.02g120100 Amaranthus hybridus HOM05D006757 ORTHO05D004651 2.7e-06 58.5 62 51.6


User provided reference genes

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