Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.4e-170 602.1 295 100.0
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 4.7e-86 322.0 328 52.1
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.9e-83 312.8 324 52.2
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 9.2e-82 307.8 326 51.2
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 6.6e-80 301.6 327 51.7
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.5e-79 299.7 326 49.7
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 4.3e-79 298.9 329 49.8
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 1.6e-78 297.0 334 51.5
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.6e-78 297.0 324 51.5
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 1.6e-78 297.0 324 51.5
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 1.6e-78 297.0 324 50.6
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 1.1e-77 294.3 250 60.0
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 5.3e-77 292.0 322 48.4
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.9e-77 291.6 330 50.3
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 6.9e-77 291.6 242 60.7
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 9.0e-77 291.2 327 50.5
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 3.4e-76 289.3 323 49.2
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 4.4e-76 288.9 323 49.2
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 4.4e-76 288.9 326 49.1
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 5.8e-76 288.5 261 55.9
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 9.9e-76 287.7 249 59.8
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 1.3e-75 287.3 322 50.0
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 2.2e-75 286.6 331 50.5
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 3.8e-75 285.8 261 54.8
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 7.1e-74 281.6 265 55.5
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 2.7e-73 279.6 324 52.2
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 6.0e-73 278.5 334 47.0
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.0e-72 277.7 383 43.6
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.3e-72 277.3 327 48.6
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.3e-72 276.6 278 53.2
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 2.3e-72 276.6 319 48.6
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 3.0e-72 276.2 324 49.1
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 5.1e-72 275.4 241 59.3
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 6.6e-72 275.0 254 55.1
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-71 274.2 329 47.7
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.1e-71 274.2 238 58.8
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.5e-71 273.9 329 47.7
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 2.5e-71 273.1 326 46.0
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.5e-71 273.1 284 51.1
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 3.3e-71 272.7 330 48.2
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.3e-71 272.7 329 47.4
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 3.3e-71 272.7 333 48.3
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 5.6e-71 271.9 328 47.9
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 5.6e-71 271.9 246 56.1
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 5.6e-71 271.9 332 48.5
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 9.6e-71 271.2 239 57.3
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.6e-70 270.4 325 45.8
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 2.1e-70 270.0 331 46.2
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.1e-70 270.0 246 56.1
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.1e-70 270.0 326 46.3
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.8e-70 269.6 246 56.1
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 4.8e-70 268.9 326 45.7
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 4.8e-70 268.9 326 45.7
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 4.8e-70 268.9 326 48.2
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 6.2e-70 268.5 243 58.8
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 1.4e-69 267.3 326 48.8
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.8e-69 266.9 330 45.2
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 2.4e-69 266.5 322 47.5
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 4.0e-69 265.8 331 47.7
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 4.0e-69 265.8 245 54.3
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 4.0e-69 265.8 235 57.9
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 6.9e-69 265.0 248 54.8
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 9.0e-69 264.6 228 59.6
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.5e-68 263.8 331 47.7
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.5e-68 263.8 249 54.2
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 1.5e-68 263.8 317 48.9
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 7.6e-68 261.5 329 47.7
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 9.9e-68 261.2 312 47.8
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 9.9e-68 261.2 330 47.3
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.2e-67 260.0 326 44.8
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 8.4e-67 258.1 307 46.6
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 2.4e-66 256.5 300 46.7
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 4.2e-66 255.8 310 47.7
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 7.1e-66 255.0 267 50.6
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 9.3e-66 254.6 289 47.8
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 9.3e-66 254.6 287 48.1
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 1.2e-65 254.2 322 46.6
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 2.7e-65 253.1 253 52.2
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 2.7e-65 253.1 251 51.4
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 1.0e-64 251.1 332 44.6
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.3e-64 250.8 235 53.6
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.8e-64 250.4 313 45.0
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.8e-64 250.4 227 58.1
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.8e-64 250.4 322 45.7
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 6.7e-64 248.4 303 46.5
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 8.7e-64 248.1 243 51.9
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.9e-63 246.9 234 53.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 2.5e-63 246.5 250 49.6
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 4.3e-63 245.7 238 52.5
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.6e-63 245.4 286 47.2
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.7e-62 242.7 324 42.9
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 8.1e-62 241.5 209 56.5
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.1e-61 241.1 320 44.7
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 1.5e-60 237.3 247 49.8
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.0e-60 236.9 212 57.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 4.2e-58 229.2 221 53.8
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 2.4e-53 213.4 239 47.3
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 1.3e-51 207.6 231 47.6
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.5e-50 203.4 224 48.2
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.3e-43 181.0 232 44.8
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 6.1e-41 172.2 109 72.5
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 3.9e-40 169.5 163 51.5
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 2.5e-39 166.8 210 47.1
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 1.8e-37 160.6 185 50.8
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 5.9e-36 155.6 122 61.5
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.5e-35 151.8 123 60.2
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 8.5e-35 151.8 232 39.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.9e-34 150.6 158 53.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.5e-34 149.1 179 52.0
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 9.4e-34 148.3 105 68.6
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.2e-33 147.9 298 33.2
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.3e-32 143.7 120 59.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.0e-32 143.3 237 38.0
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.5e-31 141.0 141 56.7
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 7.4e-31 138.7 231 36.4
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.7e-31 138.3 237 37.6
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 4.8e-30 136.0 198 44.9
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.4e-29 134.4 153 47.1
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 3.1e-29 133.3 119 56.3
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 1.2e-25 121.3 110 56.4
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.0e-24 118.2 122 48.4
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.5e-10 71.2 73 49.3
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 2.1e-09 67.4 161 31.7
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-08 64.7 43 74.4


User provided reference genes

Program Settings