Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C718T7 Lonicera japonica HOM05D001820 ORTHO05D001794 4.3e-18 93.6 46 100.0
Lj3A849G42 Lonicera japonica HOM05D001820 ORTHO05D001794 2.1e-09 64.7 41 85.4
Migut.E00697 Erythranthe guttata HOM05D001820 ORTHO05D001794 4.7e-09 63.5 41 82.9
SGA_v2.0_scaffold88G27226 Striga asiatica HOM05D001820 ORTHO05D001794 6.2e-09 63.2 41 82.9
Dinv11720 Davidia involucrata HOM05D001820 ORTHO05D001794 8.1e-09 62.8 41 82.9
Dinv17611 Davidia involucrata HOM05D001820 ORTHO05D001794 8.1e-09 62.8 41 82.9
Nitab4.5_0006277g0010 Nicotiana tabacum HOM05D001820 ORTHO05D001794 8.1e-09 62.8 41 80.5
MSTRG.2060 Avicennia marina HOM05D001820 ORTHO05D001794 1.4e-08 62.0 41 80.5
Cpa.g.sc0.142 Carica papaya HOM05D001820 ORTHO05D001794 1.8e-08 61.6 41 75.6
Nitab4.5_0000405g0070 Nicotiana tabacum HOM05D001820 ORTHO05D001794 1.8e-08 61.6 41 78.0
Solyc02g014130.3 Solanum lycopersicum HOM05D001820 ORTHO05D001794 1.8e-08 61.6 41 80.5
Sopen02g003620 Solanum pennellii HOM05D001820 ORTHO05D001794 1.8e-08 61.6 41 80.5
MSTRG.8083 Avicennia marina HOM05D001820 ORTHO05D001794 2.4e-08 61.2 41 78.0
Peaxi162Scf00363g00323 Petunia axillaris HOM05D001820 ORTHO05D001794 4.0e-08 60.5 41 78.0
SalBow2G3453 Salvia bowleyana HOM05D001820 ORTHO05D001794 4.0e-08 60.5 41 78.0
Dinv08397 Davidia involucrata HOM05D001820 ORTHO05D000006 8.9e-08 59.3 37 81.1
Oeu006357.1 Olea europaea HOM05D001820 ORTHO05D001794 8.9e-08 59.3 41 78.0
vmacro10892 Vaccinium macrocarpon HOM05D001820 ORTHO05D001794 8.9e-08 59.3 40 77.5
Lsat_1_v5_gn_3_35400 Lactuca sativa HOM05D001820 ORTHO05D001794 1.2e-07 58.9 41 70.7
Oeu026901.1 Olea europaea HOM05D001820 ORTHO05D001794 1.5e-07 58.5 41 75.6
QL03p046389 Quercus lobata HOM05D001820 ORTHO05D001794 1.5e-07 58.5 41 70.7
QL06p002024 Quercus lobata HOM05D001820 ORTHO05D001794 2.0e-07 58.2 41 70.7
Actinidia04097 Actinidia chinensis HOM05D001820 ORTHO05D001794 2.6e-07 57.8 36 80.6
Actinidia04324 Actinidia chinensis HOM05D001820 ORTHO05D001794 2.6e-07 57.8 36 80.6
DCAR_023455 Daucus carota HOM05D001820 ORTHO05D001794 2.6e-07 57.8 38 76.3
HanXRQChr17g0544951 Helianthus annuus HOM05D001820 ORTHO05D001794 2.6e-07 57.8 44 65.9
Rhsim09G0076600 Rhododendron simsii HOM05D001820 ORTHO05D001794 2.6e-07 57.8 40 80.0
Manes.11G107600 Manihot esculenta HOM05D001820 ORTHO05D001794 3.4e-07 57.4 41 75.6
Atru.chr11.1123 Acer truncatum HOM05D001820 ORTHO05D001794 4.4e-07 57.0 38 76.3
BcaB08g37274 Brassica carinata HOM05D001820 ORTHO05D005803 4.4e-07 57.0 41 70.7
A10p28460 Brassica napus HOM05D001820 ORTHO05D001794 4.4e-07 57.0 41 70.7
C09p68730 Brassica napus HOM05D001820 ORTHO05D001794 4.4e-07 57.0 41 70.7
BolC9t59620H Brassica oleracea HOM05D001820 ORTHO05D001794 4.4e-07 57.0 41 70.7
BraA10t44894Z Brassica rapa HOM05D001820 ORTHO05D001794 4.4e-07 57.0 41 70.7
Nn3g18657 Nelumbo nucifera HOM05D001820 ORTHO05D001794 4.4e-07 57.0 41 73.2
Aqoxy3G04256 Aquilegia oxysepala HOM05D001820 ORTHO05D001794 5.8e-07 56.6 41 75.6
CAN.G157.27 Capsicum annuum HOM05D001820 ORTHO05D001794 5.8e-07 56.6 41 73.2
Aa31LG11G2640 Aethionema arabicum HOM05D001820 ORTHO05D001794 7.6e-07 56.2 41 75.6
HanXRQChr06g0171531 Helianthus annuus HOM05D001820 ORTHO05D001794 7.6e-07 56.2 41 68.3
THA.LOC104820157 Tarenaya hassleriana HOM05D001820 ORTHO05D001794 7.6e-07 56.2 41 75.6
CSS0050259 Camellia sinensis var. sinensis HOM05D001820 ORTHO05D001794 9.9e-07 55.8 36 80.6
Carub.0006s0711 Capsella rubella HOM05D001820 ORTHO05D001794 9.9e-07 55.8 41 75.6
MELO3C024022.2 Cucumis melo HOM05D001820 ORTHO05D001794 9.9e-07 55.8 41 75.6
CsaV3_3G031400 Cucumis sativus L. HOM05D001820 ORTHO05D001794 9.9e-07 55.8 41 75.6
GSVIVG01012049001 Vitis vinifera HOM05D001820 ORTHO05D001794 9.9e-07 55.8 41 75.6
ATR0618G291 Amborella trichopoda HOM05D001820 ORTHO05D001794 1.3e-06 55.5 41 75.6
ECA246G4817 Erigeron canadensis HOM05D001820 ORTHO05D001794 1.3e-06 55.5 41 68.3
CDE05G2957 Ceratophyllum demersum HOM05D001820 ORTHO05D001794 1.7e-06 55.1 41 73.2
Duzib268G1208 Durio zibethinus HOM05D001820 ORTHO05D001794 1.7e-06 55.1 42 69.0
Eucgr.J00867 Eucalyptus grandis HOM05D001820 ORTHO05D001794 1.7e-06 55.1 38 73.7
CDE05G2339 Ceratophyllum demersum HOM05D001820 ORTHO05D001794 2.2e-06 54.7 39 69.2
MD13G1005600 Malus domestica HOM05D001820 ORTHO05D001794 2.2e-06 54.7 41 73.2
BcaC03g18037 Brassica carinata HOM05D001820 ORTHO05D001794 2.9e-06 54.3 45 71.1
A03p46360 Brassica napus HOM05D001820 ORTHO05D001794 2.9e-06 54.3 41 73.2
BraA03t13762Z Brassica rapa HOM05D001820 ORTHO05D001794 2.9e-06 54.3 41 73.2
CSS0027730 Camellia sinensis var. sinensis HOM05D001820 ORTHO05D001794 2.9e-06 54.3 36 77.8
ClCG10G011960 Citrullus lanatus HOM05D001820 ORTHO05D001794 2.9e-06 54.3 41 73.2
Ciclev10030571m.g Citrus clementina HOM05D001820 ORTHO05D001794 2.9e-06 54.3 38 71.1
Manes.04G055100 Manihot esculenta HOM05D001820 ORTHO05D001794 2.9e-06 54.3 41 70.7
Nn4g24951 Nelumbo nucifera HOM05D001820 ORTHO05D001794 2.9e-06 54.3 36 75.0
TAR371G1075 Trochodendron aralioides HOM05D001820 ORTHO05D001794 2.9e-06 54.3 41 70.7
AL6G34340 Arabidopsis lyrata HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
AT5G23150 Arabidopsis thaliana HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
EL10Ac9g22949 Beta vulgaris HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 70.7
C07p44380 Brassica napus HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
BolC7t44959H Brassica oleracea HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
Carub.0006s2094 Capsella rubella HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
CARHR190380 Cardamine hirsuta HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
Thhalv10003519m.g Eutrema salsugineum HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
Sp2g23970 Schrenkiella parvula HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 73.2
Sp6g34730 Schrenkiella parvula HOM05D001820 ORTHO05D001794 3.8e-06 53.9 41 70.7
Cfa008741 Carpinus fangiana HOM05D001820 ORTHO05D001794 4.9e-06 53.5 41 70.7
Oeu028420.2 Olea europaea HOM05D001820 ORTHO05D001794 4.9e-06 53.5 36 72.2
DCAR_026899 Daucus carota HOM05D001820 ORTHO05D001794 6.4e-06 53.1 41 68.3
Gohir.A09G205550 Gossypium hirsutum HOM05D001820 ORTHO05D001794 6.4e-06 53.1 38 71.1
Gorai.006G222800 Gossypium raimondii HOM05D001820 ORTHO05D001794 6.4e-06 53.1 38 71.1
MD16G1002500 Malus domestica HOM05D001820 ORTHO05D001794 6.4e-06 53.1 41 70.7
Prupe.1G347400 Prunus persica HOM05D001820 ORTHO05D001794 6.4e-06 53.1 41 70.7
PGR044G0087 Punica granatum HOM05D001820 ORTHO05D001794 6.4e-06 53.1 38 73.7
Sed0007297 Sechium edule HOM05D001820 ORTHO05D001794 6.4e-06 53.1 41 70.7
THA.LOC104800904 Tarenaya hassleriana HOM05D001820 ORTHO05D001794 6.4e-06 53.1 41 70.7
CiPaw.05G169100 Carya illinoinensis HOM05D001820 ORTHO05D001794 8.4e-06 52.8 39 69.2


User provided reference genes

Program Settings