Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C572T1 Lonicera japonica HOM05D001925 ORTHO05D004257 6.3e-28 126.7 64 100.0
Dinv32493 Davidia involucrata HOM05D001925 ORTHO05D004257 4.4e-13 77.4 61 67.2
Actinidia10041 Actinidia chinensis HOM05D001925 ORTHO05D004257 9.8e-13 76.3 45 84.4
Duzib133G0433 Durio zibethinus HOM05D001925 ORTHO05D004257 9.8e-13 76.3 62 64.5
Lj9A584T67 Lonicera japonica HOM05D001925 ORTHO05D004257 1.3e-12 75.9 43 88.4
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 1.7e-12 75.5 62 64.5
vmacro20933 Vaccinium macrocarpon HOM05D001925 ORTHO05D004257 2.2e-12 75.1 61 63.9
Lalb_Chr11g0072911 Lupinus albus HOM05D001925 ORTHO05D004257 2.9e-12 74.7 60 61.7
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 3.7e-12 74.3 45 80.0
Rhsim01G0159000 Rhododendron simsii HOM05D001925 ORTHO05D004257 6.4e-12 73.6 61 62.3
CSS0032978 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D004257 1.1e-11 72.8 61 62.3
GSVIVG01026948001 Vitis vinifera HOM05D001925 ORTHO05D004257 1.9e-11 72.0 45 77.8
Actinidia02837 Actinidia chinensis HOM05D001925 ORTHO05D004257 3.2e-11 71.2 48 72.9
Manes.05G033200 Manihot esculenta HOM05D001925 ORTHO05D004257 7.0e-11 70.1 61 59.0
TAR374G1741 Trochodendron aralioides HOM05D001925 ORTHO05D004257 7.0e-11 70.1 62 61.3
Thecc.01G357700 Theobroma cacao HOM05D001925 ORTHO05D004257 9.2e-11 69.7 61 60.7
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.0e-10 68.6 52 65.4
FAN03G0610 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.0e-10 68.6 52 65.4
FAN10G2559 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.0e-10 68.6 52 65.4
FvH4_7g14520 Fragaria vesca HOM05D001925 ORTHO05D004257 2.7e-10 68.2 52 65.4
FAN06G3089 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.7e-10 68.2 52 65.4
FAN06G4809 Fragaria x ananassa HOM05D001925 ORTHO05D004257 2.7e-10 68.2 52 65.4
FAN10G1179 Fragaria x ananassa HOM05D001925 ORTHO05D004257 3.5e-10 67.8 52 65.4
Nitab4.5_0006018g0030 Nicotiana tabacum HOM05D001925 ORTHO05D004257 3.5e-10 67.8 52 65.4
QL04p053608 Quercus lobata HOM05D001925 ORTHO05D004257 3.5e-10 67.8 45 75.6
CiPaw.02G032000 Carya illinoinensis HOM05D001925 ORTHO05D004257 6.0e-10 67.0 45 73.3
Lalb_Chr23g0275821 Lupinus albus HOM05D001925 ORTHO05D004257 6.0e-10 67.0 43 76.7
Rhsim07G0013800 Rhododendron simsii HOM05D001925 ORTHO05D004257 1.0e-09 66.2 49 73.5
Hma1.2p1_0780F.1_g216780 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 1.3e-09 65.9 48 68.8
Phvul.008G061700 Phaseolus vulgaris HOM05D001925 ORTHO05D004257 1.3e-09 65.9 61 57.4
Oeu061351.3 Olea europaea HOM05D001925 ORTHO05D004257 1.7e-09 65.5 45 68.9
unitig_749.g13536 Utricularia gibba HOM05D001925 ORTHO05D004257 1.7e-09 65.5 61 57.4
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 2.3e-09 65.1 61 55.7
Manes.01G255700 Manihot esculenta HOM05D001925 ORTHO05D004257 2.3e-09 65.1 61 55.7
Oeu031215.1 Olea europaea HOM05D001925 ORTHO05D004257 2.3e-09 65.1 43 72.1
TAR375G1105 Trochodendron aralioides HOM05D001925 ORTHO05D004257 2.3e-09 65.1 62 58.1
Glyma.09G258600 Glycine max HOM05D001925 ORTHO05D004257 3.0e-09 64.7 45 71.1
Sopen01g038550 Solanum pennellii HOM05D001925 ORTHO05D004257 6.6e-09 63.5 52 65.4
THA.LOC104817027 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 6.6e-09 63.5 43 72.1
VMungo1383G2450 Vigna mungo HOM05D001925 ORTHO05D004257 6.6e-09 63.5 61 55.7
Aa31LG5G590 Aethionema arabicum HOM05D001925 ORTHO05D004257 8.6e-09 63.2 44 72.7
Cc02_g38170 Coffea canephora HOM05D001925 ORTHO05D004257 1.1e-08 62.8 45 66.7
Nitab4.5_0000583g0190 Nicotiana tabacum HOM05D001925 ORTHO05D004257 1.1e-08 62.8 45 68.9
Oeu005388.3 Olea europaea HOM05D001925 ORTHO05D004257 1.1e-08 62.8 62 56.5
PGSC0003DMG400000175 Solanum tuberosum HOM05D001925 ORTHO05D004257 1.1e-08 62.8 42 73.8
Ca_07929_v3 Cicer arietinum L. HOM05D001925 ORTHO05D004257 1.5e-08 62.4 45 68.9
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.5e-08 62.4 61 57.4
Gohir.A11G089800 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.5e-08 62.4 48 66.7
Gorai.007G100500 Gossypium raimondii HOM05D001925 ORTHO05D004257 1.5e-08 62.4 48 66.7
Lj1g0025308 Lotus japonicus HOM05D001925 ORTHO05D004257 1.5e-08 62.4 61 55.7
Peaxi162Scf00020g00730 Petunia axillaris HOM05D001925 ORTHO05D004257 1.5e-08 62.4 42 73.8
RcHm_v2.0_Chr1g0355951 Rosa chinensis HOM05D001925 ORTHO05D004257 1.5e-08 62.4 43 72.1
TWI59G0730 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 1.5e-08 62.4 43 69.8
TAR629G3070 Trochodendron aralioides HOM05D001925 ORTHO05D004257 1.5e-08 62.4 61 57.4
CANSAT21G1319 Cannabis sativa HOM05D001925 ORTHO05D004257 2.5e-08 61.6 43 72.1
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 2.5e-08 61.6 42 73.8
DCAR_025195 Daucus carota HOM05D001925 ORTHO05D004257 2.5e-08 61.6 46 65.2
Duzib138G1880 Durio zibethinus HOM05D001925 ORTHO05D004257 2.5e-08 61.6 61 54.1
Atru.chr5.510 Acer truncatum HOM05D001925 ORTHO05D004257 3.3e-08 61.2 45 71.1
DCAR_007445 Daucus carota HOM05D001925 ORTHO05D004257 3.3e-08 61.2 43 65.1
Prupe.2G172100 Prunus persica HOM05D001925 ORTHO05D004257 3.3e-08 61.2 45 68.9
Sc23g0002810 Simmondsia chinensis HOM05D001925 ORTHO05D004257 3.3e-08 61.2 59 57.6
THA.LOC104825845 Tarenaya hassleriana HOM05D001925 ORTHO05D004257 3.3e-08 61.2 43 67.4
TPR.G37799 Trifolium pratense HOM05D001925 ORTHO05D004257 3.3e-08 61.2 45 66.7
arahy.Tifrunner.gnm1.ann1.E5DFEG Arachis hypogaea HOM05D001925 ORTHO05D004257 4.3e-08 60.8 61 54.1
arahy.Tifrunner.gnm1.ann1.IGP217 Arachis hypogaea HOM05D001925 ORTHO05D004257 4.3e-08 60.8 61 54.1
Cpa.g.sc11.19 Carica papaya HOM05D001925 ORTHO05D004257 4.3e-08 60.8 42 71.4
TWI23G0808 Tripterygium wilfordii HOM05D001925 ORTHO05D004257 4.3e-08 60.8 61 54.1
Glyma.18G234100 Glycine max HOM05D001925 ORTHO05D004257 5.6e-08 60.5 45 64.4
Hma1.2p1_0780F.1_g216750 Hydrangea macrophylla HOM05D001925 ORTHO05D004257 5.6e-08 60.5 61 54.1
Medtr7g077860 Medicago truncatula HOM05D001925 ORTHO05D004257 5.6e-08 60.5 45 64.4
Thhalv10029186m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 1.6e-07 58.9 46 71.7
Gohir.D11G094100 Gossypium hirsutum HOM05D001925 ORTHO05D004257 1.6e-07 58.9 43 69.8
Aqoxy7G00278 Aquilegia oxysepala HOM05D001925 ORTHO05D004257 2.1e-07 58.5 61 50.8
CAN.G78.91 Capsicum annuum HOM05D001925 ORTHO05D004257 2.1e-07 58.5 45 64.4
Migut.M00740 Erythranthe guttata HOM05D001925 ORTHO05D004257 2.1e-07 58.5 43 65.1
Medtr2g027720 Medicago truncatula HOM05D001925 ORTHO05D004257 2.1e-07 58.5 45 62.2
PGR042G2528 Punica granatum HOM05D001925 ORTHO05D004257 2.1e-07 58.5 43 67.4
CiPaw.01G062900 Carya illinoinensis HOM05D001925 ORTHO05D004257 2.8e-07 58.2 41 75.6
SalBow8G4919 Salvia bowleyana HOM05D001925 ORTHO05D004257 2.8e-07 58.2 41 70.7
Sed0006621 Sechium edule HOM05D001925 ORTHO05D004257 2.8e-07 58.2 48 64.6
TAR636G0324 Trochodendron aralioides HOM05D001925 ORTHO05D004257 3.6e-07 57.8 61 54.1
ATR0680G064 Amborella trichopoda HOM05D001925 ORTHO05D004257 4.7e-07 57.4 50 60.0
MSTRG.14225 Avicennia marina HOM05D001925 ORTHO05D004257 4.7e-07 57.4 44 63.6
Eucgr.D02304 Eucalyptus grandis HOM05D001925 ORTHO05D004257 4.7e-07 57.4 62 54.8
Psat3g108000 Pisum sativum HOM05D001925 ORTHO05D004257 4.7e-07 57.4 48 62.5
PGR031G2850 Punica granatum HOM05D001925 ORTHO05D004257 8.1e-07 56.6 42 64.3
Ciclev10021244m.g Citrus clementina HOM05D001925 ORTHO05D004257 1.1e-06 56.2 61 52.5
CARHR248450 Cardamine hirsuta HOM05D001925 ORTHO05D004257 3.1e-06 54.7 43 65.1
SalBow3G4075 Salvia bowleyana HOM05D001925 ORTHO05D004257 4.0e-06 54.3 56 50.0
AL4G45210 Arabidopsis lyrata HOM05D001925 ORTHO05D004257 5.2e-06 53.9 40 67.5
MBI18_g02843_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D004257 6.8e-06 53.5 45 62.2
arahy.Tifrunner.gnm1.ann1.2X3TQS Arachis hypogaea HOM05D001925 ORTHO05D004257 8.9e-06 53.1 41 63.4
ClCG05G001470 Citrullus lanatus HOM05D001925 ORTHO05D004257 8.9e-06 53.1 48 60.4
Thhalv10001583m.g Eutrema salsugineum HOM05D001925 ORTHO05D004257 8.9e-06 53.1 45 66.7
Nitab4.5_0000386g0060 Nicotiana tabacum HOM05D001925 ORTHO05D004257 8.9e-06 53.1 42 64.3
PSO063G1799 Papaver somniferum HOM05D001925 ORTHO05D004257 8.9e-06 53.1 43 65.1


User provided reference genes

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