Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C54G11 Lonicera japonica HOM05D006664 ORTHO05D009007 2.0e-158 562.4 285 100.0
Lj2A257T62 Lonicera japonica HOM05D006664 ORTHO05D009007 4.5e-57 225.7 283 52.3
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 9.3e-55 218.0 269 50.2
Lj6A74G24 Lonicera japonica HOM05D006664 ORTHO05D009007 9.6e-52 208.0 174 63.8
Lj3A762T33 Lonicera japonica HOM05D006664 ORTHO05D009007 9.4e-31 138.3 100 71.0
Lj6A8G19 Lonicera japonica HOM05D006664 ORTHO05D009007 2.8e-27 126.7 210 42.4
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 3.2e-15 86.7 154 33.1
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 7.2e-15 85.5 154 32.5
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 6.8e-13 79.0 159 34.0
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.6e-12 77.0 158 30.4
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 1.3e-11 74.7 163 33.1
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.2e-11 73.9 158 31.0
SGA_v2.0_scaffold305G47956 Striga asiatica HOM05D006664 ORTHO05D009007 8.3e-11 72.0 180 28.9
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 1.4e-10 71.2 152 30.9
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 2.4e-10 70.5 162 29.0
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 1.6e-09 67.8 172 29.7
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 1.6e-09 67.8 153 32.7
Migut.A00600 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.6e-09 67.8 174 28.7
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.5e-09 66.2 160 28.1
Sopen05g009680 Solanum pennellii HOM05D008437 ORTHO05D010577 2.2e-08 63.9 114 33.3
TAR629G0642 Trochodendron aralioides HOM05D008437 ORTHO05D008819 2.2e-08 63.9 158 30.4
Actinidia23407 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.9e-08 63.5 159 28.9
Actinidia23408 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.9e-08 63.5 159 28.9
Actinidia27246 Actinidia chinensis HOM05D006664 ORTHO05D009007 2.9e-08 63.5 159 28.9
Migut.A00598 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.5e-08 62.4 174 27.0
Rhsim07G0046100 Rhododendron simsii HOM05D006664 ORTHO05D009007 6.5e-08 62.4 158 30.4
Sopen09g006880 Solanum pennellii HOM05D008437 ORTHO05D010577 6.5e-08 62.4 114 32.5
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 6.5e-08 62.4 222 29.3
TAR636G0594 Trochodendron aralioides HOM05D006664 ORTHO05D008819 6.5e-08 62.4 154 27.3
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 1.1e-07 61.6 166 30.7
Solyc03g078530.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.1e-07 61.6 169 29.6
Sopen09g006900 Solanum pennellii HOM05D008437 ORTHO05D010577 1.5e-07 61.2 93 35.5
Sopen03g021420 Solanum pennellii HOM05D008437 ORTHO05D010577 1.9e-07 60.8 149 31.5
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 5.5e-07 59.3 155 25.8
Solyc09g012010.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 5.5e-07 59.3 149 30.9
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 9.4e-07 58.5 168 25.0
Sopen09g006830 Solanum pennellii HOM05D008437 ORTHO05D010577 9.4e-07 58.5 149 30.9
PGSC0003DMG400046101 Solanum tuberosum HOM05D008437 ORTHO05D010577 9.4e-07 58.5 93 35.5
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 1.2e-06 58.2 160 26.9
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 1.2e-06 58.2 165 26.7
Solyc09g012020.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 1.2e-06 58.2 182 24.7
TAR633G2422 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.6e-06 57.8 93 34.4
COL.COLO4_14612 Corchorus olitorius HOM05D006607 ORTHO05D008166 2.7e-06 57.0 137 26.3
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 2.7e-06 57.0 166 28.9
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 2.7e-06 57.0 163 25.2
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 4.7e-06 56.2 158 29.7
Aqoxy1G01388 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 6.1e-06 55.8 170 25.9
Nitab4.5_0000008g0620 Nicotiana tabacum HOM05D008437 ORTHO05D010577 6.1e-06 55.8 101 31.7
SGA_v2.0_scaffold227G43212 Striga asiatica HOM05D006664 ORTHO05D009007 6.1e-06 55.8 163 26.4
TAR633G0254 Trochodendron aralioides HOM05D007726 ORTHO05D008819 6.1e-06 55.8 85 34.1
TAR633G2355 Trochodendron aralioides HOM05D007726 ORTHO05D008819 6.1e-06 55.8 85 34.1


User provided reference genes

Program Settings