Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C18T3 Lonicera japonica HOM05D003336 ORTHO05D003807 1.1e-50 203.0 103 100.0
Lj6C18T11 Lonicera japonica HOM05D003336 ORTHO05D003807 1.4e-24 116.3 110 60.0
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 2.4e-24 115.5 110 58.2
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 2.4e-24 115.5 110 58.2
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 3.1e-24 115.2 110 57.3
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 59.1
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 58.2
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 56.4
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 58.2
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 58.2
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 4.0e-24 114.8 110 59.1
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 5.2e-24 114.4 110 59.1
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 5.2e-24 114.4 110 57.3
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 5.2e-24 114.4 110 57.3
Dinv22743 Davidia involucrata HOM05D003336 ORTHO05D003807 6.8e-24 114.0 110 59.1
Duzib175G0004 Durio zibethinus HOM05D003336 ORTHO05D003807 6.8e-24 114.0 110 57.3
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 6.8e-24 114.0 110 58.2
vmacro00616 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 6.8e-24 114.0 123 55.3
vmacro00649 Vaccinium macrocarpon HOM05D003336 ORTHO05D003807 6.8e-24 114.0 123 55.3
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 8.9e-24 113.6 135 51.9
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 8.9e-24 113.6 135 51.9
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 8.9e-24 113.6 110 58.2
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 8.9e-24 113.6 110 57.3
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 8.9e-24 113.6 110 58.2
GSVIVG01010779001 Vitis vinifera HOM05D003336 ORTHO05D003807 8.9e-24 113.6 110 58.2
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.2e-23 113.2 110 57.3
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 1.2e-23 113.2 110 59.1
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 1.2e-23 113.2 135 52.6
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 1.2e-23 113.2 110 57.3
Peaxi162Scf00108g01317 Petunia axillaris HOM05D003336 ORTHO05D003807 1.2e-23 113.2 111 57.7
Aqoxy1G02652 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.5e-23 112.8 110 56.4
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 1.5e-23 112.8 110 57.3
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.5e-23 112.8 103 60.2
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.5e-23 112.8 103 60.2
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 1.5e-23 112.8 110 58.2
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 1.5e-23 112.8 110 58.2
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 58.2
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 57.3
Ca_10458_v3 Cicer arietinum L. HOM05D003336 ORTHO05D003807 2.0e-23 112.5 114 56.1
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 57.3
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 57.3
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 57.3
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 2.0e-23 112.5 110 57.3
Actinidia35985 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.6e-23 112.1 109 57.8
Actinidia35987 Actinidia chinensis HOM05D003336 ORTHO05D003807 2.6e-23 112.1 109 57.8
CSS0035259 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.6e-23 112.1 113 56.6
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 56.4
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 58.2
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 58.2
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 58.2
Nitab4.5_0000233g0220 Nicotiana tabacum HOM05D003336 ORTHO05D003807 2.6e-23 112.1 109 58.7
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 58.2
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 56.4
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 2.6e-23 112.1 110 56.4
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.4e-23 111.7 110 57.3
Haze_21691 Corylus avellana HOM05D003336 ORTHO05D003807 3.4e-23 111.7 109 56.9
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 3.4e-23 111.7 110 55.5
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 3.4e-23 111.7 110 55.5
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 3.4e-23 111.7 110 57.3
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 55.5
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 57.3
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 57.3
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 57.3
CSS0038429 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 57.3
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
MBI01_g10303_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 5.8e-23 110.9 112 57.1
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 56.4
SalBow1G0055 Salvia bowleyana HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 55.5
SalBow1G1314 Salvia bowleyana HOM05D003336 ORTHO05D003807 5.8e-23 110.9 110 55.5
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 7.6e-23 110.5 110 56.4
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 7.6e-23 110.5 110 56.4
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 7.6e-23 110.5 110 56.4
Cfa013247 Carpinus fangiana HOM05D003336 ORTHO05D003807 7.6e-23 110.5 109 56.0
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 7.6e-23 110.5 110 57.3
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 7.6e-23 110.5 110 55.5
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
FvH4_7g04970 Fragaria vesca HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 9.9e-23 110.2 112 56.2
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 9.9e-23 110.2 110 56.4
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 1.3e-22 109.8 110 55.5
Cc04_g08960 Coffea canephora HOM05D003336 ORTHO05D003807 1.7e-22 109.4 110 56.4
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.7e-22 109.4 110 55.5
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 1.7e-22 109.4 110 55.5
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 2.2e-22 109.0 135 49.6
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 2.2e-22 109.0 110 55.5
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 2.2e-22 109.0 110 55.5
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 2.9e-22 108.6 110 55.5
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 2.9e-22 108.6 110 55.5
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.8e-22 108.2 110 55.5
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 3.8e-22 108.2 110 53.6
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 4.9e-22 107.8 137 50.4
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 6.4e-22 107.5 110 53.6
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 8.4e-22 107.1 110 55.5
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 1.1e-21 106.7 110 54.5
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 1.1e-21 106.7 110 54.5
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 1.9e-21 105.9 110 54.5
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 2.4e-21 105.5 110 53.6
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 3.2e-21 105.1 110 51.8
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 4.2e-21 104.8 110 54.5
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 5.4e-21 104.4 109 56.0
Lalb_Chr09g0333021 Lupinus albus HOM05D003336 ORTHO05D003807 9.2e-21 103.6 110 54.5
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.6e-20 102.8 109 55.0
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 4.6e-20 101.3 108 51.9
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 6.0e-20 100.9 135 48.1
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 6.0e-20 100.9 109 54.1
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 2.3e-19 99.0 110 51.8
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 5.6e-18 94.4 101 55.4
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.6e-17 92.8 98 55.1
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 8.1e-17 90.5 110 46.4
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.1e-16 90.1 121 46.3
Haze_26283 Corylus avellana HOM05D003336 ORTHO05D003807 1.4e-16 89.7 110 45.5
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 3.1e-16 88.6 46 89.1
BcaB07g33710 Brassica carinata HOM05D003336 ORTHO05D003807 4.0e-16 88.2 99 52.5
Nitab4.5_0005460g0060 Nicotiana tabacum HOM05D003336 ORTHO05D003807 5.3e-16 87.8 98 54.1
CDE02G0747 Ceratophyllum demersum HOM05D003336 ORTHO05D003807 6.9e-16 87.4 86 55.8
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 4.4e-15 84.7 137 36.5
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 9.9e-15 83.6 71 66.2
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.3e-14 83.2 46 87.0
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 2.2e-14 82.4 46 84.8
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.1e-13 80.1 49 79.6
Lalb_Chr05g0230051 Lupinus albus HOM05D003336 ORTHO05D003807 1.1e-13 80.1 47 83.0
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 1.1e-13 80.1 90 51.1
MELO3C000960.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.3e-11 73.2 89 48.3
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 1.7e-11 72.8 55 65.5
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 8.7e-11 70.5 40 82.5
Sabra07G0105400 Salix brachista HOM05D003336 ORTHO05D000611 8.7e-11 70.5 78 50.0
CSS0042287 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.6e-10 67.8 48 62.5
Sed0015341 Sechium edule HOM05D003336 ORTHO05D003807 7.3e-10 67.4 115 43.5
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.1e-09 65.9 93 47.3
SEGI_10539 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 3.6e-09 65.1 46 67.4
CSS0009752 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.2e-09 64.3 93 46.2
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.1e-08 62.0 84 46.4
Prupe.1G196100 Prunus persica HOM05D003336 ORTHO05D003807 6.9e-08 60.8 81 49.4
CSS0004282 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.6e-07 58.9 85 49.4
CSS0005877 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.8e-07 57.8 32 78.1
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.7e-06 56.2 29 89.7
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.7e-06 56.2 29 89.7
Lj6C12T9 Lonicera japonica HOM05D003336 ORTHO05D003807 4.9e-06 54.7 34 79.4
CSS0002456 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.4e-06 54.3 50 58.0


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