Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C158G2 Lonicera japonica HOM05D000092 ORTHO05D000042 8.2e-97 357.1 182 100.0
Lj6C154G2 Lonicera japonica HOM05D000092 ORTHO05D000042 6.7e-83 310.8 203 81.8
Lj6C157T5 Lonicera japonica HOM05D000092 ORTHO05D000042 2.4e-80 302.4 203 79.8
Lj1P1085T29 Lonicera japonica HOM05D000092 ORTHO05D000042 6.8e-43 177.9 169 59.2
Lj6C190T0 Lonicera japonica HOM05D000092 ORTHO05D000042 8.1e-20 101.3 215 34.4
Lj6A184T21 Lonicera japonica HOM05D000092 ORTHO05D000042 9.9e-18 94.4 195 35.9
Lj1A1097G36 Lonicera japonica HOM05D000092 ORTHO05D000042 2.4e-16 89.7 193 34.7
Lj1C1095G2 Lonicera japonica HOM05D000092 ORTHO05D000042 7.1e-16 88.2 193 34.7
Lj6P197T7 Lonicera japonica HOM05D000092 ORTHO05D000042 6.0e-15 85.1 189 33.9
Lj6A224T23 Lonicera japonica HOM05D000092 ORTHO05D000042 7.9e-15 84.7 232 31.9
Lj1A1096T56 Lonicera japonica HOM05D000092 ORTHO05D000042 1.3e-14 84.0 155 35.5
Lj6A205T27 Lonicera japonica HOM05D000092 ORTHO05D000042 2.3e-14 83.2 154 36.4
Lj1A1098G65 Lonicera japonica HOM05D000092 ORTHO05D000042 1.5e-13 80.5 158 37.3
Lj6A181T34 Lonicera japonica HOM05D000092 ORTHO05D000042 3.3e-13 79.3 146 37.7
Lj6C187G0 Lonicera japonica HOM05D000092 ORTHO05D000042 4.3e-13 79.0 164 36.6
Lj6P219T6 Lonicera japonica HOM05D000092 ORTHO05D000042 4.3e-13 79.0 160 33.1
Lj6P197T8 Lonicera japonica HOM05D000092 ORTHO05D000042 5.6e-13 78.6 161 34.8
Lj1A1085T44 Lonicera japonica HOM05D000092 ORTHO05D000042 9.6e-13 77.8 223 28.7
Lj1A1096T58 Lonicera japonica HOM05D000092 ORTHO05D000042 1.6e-12 77.0 157 35.7
QL03p003358 Quercus lobata HOM05D000092 ORTHO05D000042 2.8e-12 76.3 173 28.3
Dinv20774 Davidia involucrata HOM05D000092 ORTHO05D000042 3.6e-12 75.9 179 29.1
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 8.1e-12 74.7 94 40.4
Lj6A226G37 Lonicera japonica HOM05D000092 ORTHO05D000042 8.1e-12 74.7 159 34.6
Dinv13385 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-11 74.3 98 38.8
Lj1A1096G52 Lonicera japonica HOM05D000092 ORTHO05D000042 1.1e-11 74.3 157 31.8
QL07p010547 Quercus lobata HOM05D000092 ORTHO05D000042 1.4e-11 73.9 164 28.0
CSS0007906 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 2.4e-11 73.2 156 32.7
Lj6A197T31 Lonicera japonica HOM05D000092 ORTHO05D000042 4.0e-11 72.4 158 34.2
Lj6P179T11 Lonicera japonica HOM05D000092 ORTHO05D000042 5.3e-11 72.0 164 29.9
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 5.3e-11 72.0 210 26.7
Dinv05367 Davidia involucrata HOM05D013973 ORTHO05D013263 6.9e-11 71.6 105 38.1
Lj6A219T24 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-11 71.2 155 34.2
QL07p019286 Quercus lobata HOM05D000092 ORTHO05D000042 1.2e-10 70.9 167 27.5
Haze_04284 Corylus avellana HOM05D000092 ORTHO05D000042 1.5e-10 70.5 100 36.0
QL07p019306 Quercus lobata HOM05D000092 ORTHO05D000042 1.5e-10 70.5 162 29.0
Actinidia38183 Actinidia chinensis HOM05D000092 ORTHO05D000042 2.0e-10 70.1 238 27.7
Lju6355C0T0 Lonicera japonica HOM05D000092 ORTHO05D000042 2.0e-10 70.1 140 37.1
CiPaw.16G056500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.6e-10 69.7 186 27.4
Dinv24998 Davidia involucrata HOM05D000092 ORTHO05D016246 2.6e-10 69.7 92 35.9
Dinv25005 Davidia involucrata HOM05D000092 ORTHO05D000042 2.6e-10 69.7 92 37.0
QL07p010874 Quercus lobata HOM05D000092 ORTHO05D000042 2.6e-10 69.7 194 28.4
Dinv25008 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-10 69.3 92 35.9
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 3.4e-10 69.3 183 27.3
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 5.8e-10 68.6 170 27.1
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 5.8e-10 68.6 170 27.1
Lj1A1098T75 Lonicera japonica HOM05D000092 ORTHO05D000042 5.8e-10 68.6 181 31.5
Lj6A185T29 Lonicera japonica HOM05D000092 ORTHO05D000042 5.8e-10 68.6 166 33.7
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 7.6e-10 68.2 98 34.7
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 7.6e-10 68.2 98 34.7
Lj6A179T31 Lonicera japonica HOM05D000092 ORTHO05D000042 7.6e-10 68.2 152 32.9
QL07p010720 Quercus lobata HOM05D000092 ORTHO05D000042 7.6e-10 68.2 192 27.1
QL03p003333 Quercus lobata HOM05D000092 ORTHO05D000042 9.9e-10 67.8 207 27.1
QL07p010927 Quercus lobata HOM05D000092 ORTHO05D000042 9.9e-10 67.8 151 28.5
GSVIVG01030726001 Vitis vinifera HOM05D000092 ORTHO05D000042 9.9e-10 67.8 126 31.0
QL09p045493 Quercus lobata HOM05D000092 ORTHO05D000042 1.3e-09 67.4 186 28.5
Lj6P195T10 Lonicera japonica HOM05D000092 ORTHO05D000042 1.7e-09 67.0 164 30.5
Rhsim07G0168300 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.7e-09 67.0 245 26.5
Manes.08G163700 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-09 66.6 185 26.5
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-09 66.2 230 24.8
QL07p019170 Quercus lobata HOM05D000254 ORTHO05D000165 2.9e-09 66.2 139 29.5
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 4.9e-09 65.5 119 30.3
VMungo0331G0197 Vigna mungo HOM05D000092 ORTHO05D000042 4.9e-09 65.5 173 28.3
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 6.4e-09 65.1 187 25.7
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 6.4e-09 65.1 163 26.4
QL03p001771 Quercus lobata HOM05D000092 ORTHO05D000042 6.4e-09 65.1 207 25.6
Eucgr.L00073 Eucalyptus grandis HOM05D000092 ORTHO05D000042 8.4e-09 64.7 100 36.0
QL03p002023 Quercus lobata HOM05D000092 ORTHO05D000042 8.4e-09 64.7 208 26.0
GSVIVG01022044001 Vitis vinifera HOM05D000092 ORTHO05D000042 8.4e-09 64.7 104 37.5
GSVIVG01023566001 Vitis vinifera HOM05D000092 ORTHO05D000042 8.4e-09 64.7 179 24.6
Cfa019907 Carpinus fangiana HOM05D000092 ORTHO05D000042 1.1e-08 64.3 173 27.2
CiPaw.16G058600 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.9e-08 63.5 114 31.6
Medtr3g053180 Medicago truncatula HOM05D000092 ORTHO05D000042 1.9e-08 63.5 171 27.5
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-08 63.2 169 27.2
Duzib128G0093 Durio zibethinus HOM05D000092 ORTHO05D000042 2.4e-08 63.2 205 22.9
QL07p010511 Quercus lobata HOM05D000092 ORTHO05D000042 2.4e-08 63.2 190 27.4
Rhsim04G0053600 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-08 63.2 185 29.7
Rhsim04G0054600 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-08 63.2 185 29.7
Rhsim04G0055200 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-08 63.2 185 29.7
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 3.2e-08 62.8 96 34.4
Lsat_1_v5_gn_2_3981 Lactuca sativa HOM05D000092 ORTHO05D000042 3.2e-08 62.8 111 28.8
TWI32G0989 Tripterygium wilfordii HOM05D000092 ORTHO05D000042 3.2e-08 62.8 189 27.0
Actinidia38188 Actinidia chinensis HOM05D000092 ORTHO05D000042 4.2e-08 62.4 181 26.0
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 4.2e-08 62.4 140 30.0
GSVIVG01023548001 Vitis vinifera HOM05D000092 ORTHO05D000042 4.2e-08 62.4 178 24.7
CSS0045321 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 5.5e-08 62.0 84 41.7
CiPaw.16G058100 Carya illinoinensis HOM05D000368 ORTHO05D000289 5.5e-08 62.0 143 30.1
COL.COLO4_37555 Corchorus olitorius HOM05D000092 ORTHO05D000042 5.5e-08 62.0 204 23.5
CSS0003439 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 7.1e-08 61.6 109 36.7
vmacro23053 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 9.3e-08 61.2 217 24.9
CiPaw.16G081300 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.2e-07 60.8 171 28.7
Hma1.2p1_1162F.1_g262670 Hydrangea macrophylla HOM05D000092 ORTHO05D000042 1.2e-07 60.8 184 27.7
QL01p042119 Quercus lobata HOM05D000092 ORTHO05D000042 1.6e-07 60.5 175 26.3
QL10p064739 Quercus lobata HOM05D000092 ORTHO05D000042 1.6e-07 60.5 100 31.0
TWI32G0180 Tripterygium wilfordii HOM05D000092 ORTHO05D000042 1.6e-07 60.5 189 24.3
CiPaw.08G168600 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.1e-07 60.1 171 29.8
Eucgr.G00860 Eucalyptus grandis HOM05D000092 ORTHO05D000042 2.1e-07 60.1 203 28.1
Glyma.07G077700 Glycine max HOM05D000092 ORTHO05D000042 2.1e-07 60.1 169 26.0
Lj5A773T44 Lonicera japonica HOM05D046481 ORTHO05D018013 2.1e-07 60.1 107 29.0
QL03p032559 Quercus lobata HOM05D000092 ORTHO05D000042 2.1e-07 60.1 233 24.9
Eucgr.L00094 Eucalyptus grandis HOM05D000092 ORTHO05D000042 2.7e-07 59.7 192 26.6
Phvul.010G091701 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 2.7e-07 59.7 173 27.2
Thecc.05G202500 Theobroma cacao HOM05D000092 ORTHO05D000042 2.7e-07 59.7 106 34.0
CiPaw.16G011600 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.5e-07 59.3 213 24.9
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 3.5e-07 59.3 107 30.8
Medtr1g442750 Medicago truncatula HOM05D000092 ORTHO05D000042 3.5e-07 59.3 105 37.1
vmacro07802 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 3.5e-07 59.3 197 25.9
GSVIVG01036188001 Vitis vinifera HOM05D000092 ORTHO05D000042 3.5e-07 59.3 199 27.6
CSS0042157 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 4.6e-07 58.9 162 27.2
CiPaw.16G057100 Carya illinoinensis HOM05D000092 ORTHO05D000042 4.6e-07 58.9 129 32.6
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-07 58.9 207 23.7
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 4.6e-07 58.9 212 26.4
PGR031G3137 Punica granatum HOM05D000092 ORTHO05D000042 4.6e-07 58.9 107 32.7
PGR031G3667 Punica granatum HOM05D000092 ORTHO05D000042 4.6e-07 58.9 155 31.0
Rhsim04G0114200 Rhododendron simsii HOM05D000092 ORTHO05D000042 4.6e-07 58.9 224 25.4
Dinv07584 Davidia involucrata HOM05D000092 ORTHO05D000042 6.0e-07 58.5 210 26.7
Medtr2g089975 Medicago truncatula HOM05D000092 ORTHO05D000042 6.0e-07 58.5 102 34.3
Rhsim04G0114500 Rhododendron simsii HOM05D000092 ORTHO05D000042 6.0e-07 58.5 101 36.6
Sabra13G0018700 Salix brachista HOM05D000092 ORTHO05D000042 6.0e-07 58.5 186 25.3
vmacro07639 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 6.0e-07 58.5 192 25.0
vmacro23497 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 6.0e-07 58.5 139 25.9
Cfa006504 Carpinus fangiana HOM05D000092 ORTHO05D000042 7.9e-07 58.2 90 35.6
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 7.9e-07 58.2 185 25.9
Lj6P184T4 Lonicera japonica HOM05D000092 ORTHO05D000042 7.9e-07 58.2 140 32.9
Manes.09G159732 Manihot esculenta HOM05D000092 ORTHO05D000042 7.9e-07 58.2 121 36.4
Medtr8g059275 Medicago truncatula HOM05D000092 ORTHO05D000042 7.9e-07 58.2 177 30.5
QL01p042065 Quercus lobata HOM05D000092 ORTHO05D000042 7.9e-07 58.2 175 26.3
Sabra13G0013800 Salix brachista HOM05D000092 ORTHO05D000042 7.9e-07 58.2 219 25.1
Sabra13G0015300 Salix brachista HOM05D000092 ORTHO05D000042 7.9e-07 58.2 186 26.3
Medtr0068s0080 Medicago truncatula HOM05D000092 ORTHO05D000042 1.0e-06 57.8 102 35.3
vmacro07830 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.0e-06 57.8 95 34.7
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.3e-06 57.4 219 25.6
CSS0030405 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.3e-06 57.4 126 31.0
Sabra13G0019600 Salix brachista HOM05D000092 ORTHO05D000042 1.3e-06 57.4 206 24.8
Thecc.09G244900 Theobroma cacao HOM05D000092 ORTHO05D000042 1.3e-06 57.4 173 25.4
GSVIVG01036191001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.3e-06 57.4 217 24.0
CiPaw.16G012100 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.8e-06 57.0 164 26.2
CiPaw.16G058500 Carya illinoinensis HOM05D000092 ORTHO05D000042 2.3e-06 56.6 165 26.1
Prupe.2G025400 Prunus persica HOM05D000092 ORTHO05D000042 2.3e-06 56.6 198 29.8
Rhsim04G0089800 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.3e-06 56.6 159 29.6
Sabra13G0014400 Salix brachista HOM05D000092 ORTHO05D000042 2.3e-06 56.6 217 23.0
Sabra13G0019700 Salix brachista HOM05D000092 ORTHO05D005874 2.3e-06 56.6 219 24.7
TWI32G0088 Tripterygium wilfordii HOM05D000092 ORTHO05D000042 2.3e-06 56.6 187 25.7
TWI32G0338 Tripterygium wilfordii HOM05D000092 ORTHO05D000042 2.3e-06 56.6 187 25.7
CSS0018500 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.0e-06 56.2 101 33.7
CSS0021620 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 3.0e-06 56.2 83 38.6
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 3.0e-06 56.2 91 31.9
Lalb_Chr01g0006961 Lupinus albus HOM05D000092 ORTHO05D000042 3.0e-06 56.2 88 35.2
Psat6g104440 Pisum sativum HOM05D000092 ORTHO05D000042 3.0e-06 56.2 181 29.3
Prupe.2G029300 Prunus persica HOM05D000092 ORTHO05D000042 3.0e-06 56.2 197 28.9
QL03p002457 Quercus lobata HOM05D000092 ORTHO05D000042 3.0e-06 56.2 207 23.2
Rhsim03G0040200 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.0e-06 56.2 93 33.3
Sabra13G0018200 Salix brachista HOM05D000092 ORTHO05D000042 3.0e-06 56.2 186 24.7
Actinidia38180 Actinidia chinensis HOM05D000092 ORTHO05D000042 3.9e-06 55.8 181 24.9
CiPaw.16G011800 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.9e-06 55.8 85 37.6
CiPaw.16G058800 Carya illinoinensis HOM05D000092 ORTHO05D000042 3.9e-06 55.8 82 32.9
Manes.02G215600 Manihot esculenta HOM05D000092 ORTHO05D000042 3.9e-06 55.8 97 35.1
PGR031G1670 Punica granatum HOM05D000092 ORTHO05D000042 3.9e-06 55.8 131 29.0
Sabra13G0018100 Salix brachista HOM05D000092 ORTHO05D000042 3.9e-06 55.8 134 28.4
CiPaw.14G091300 Carya illinoinensis HOM05D000092 ORTHO05D000042 5.1e-06 55.5 205 25.9
Lj6P181T14 Lonicera japonica HOM05D000092 ORTHO05D000042 5.1e-06 55.5 141 29.1
Phvul.010G091500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.1e-06 55.5 173 25.4
PGR031G0027 Punica granatum HOM05D000092 ORTHO05D000042 5.1e-06 55.5 103 29.1
PGR031G0923 Punica granatum HOM05D000092 ORTHO05D000042 5.1e-06 55.5 103 29.1
PGR035G0003 Punica granatum HOM05D000092 ORTHO05D000042 5.1e-06 55.5 103 29.1
RcHm_v2.0_Chr5g0016111 Rosa chinensis HOM05D000092 ORTHO05D000042 5.1e-06 55.5 162 29.0
CSS0020255 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 6.7e-06 55.1 109 33.0
Ciclev10018143m.g Citrus clementina HOM05D000092 ORTHO05D000042 6.7e-06 55.1 101 29.7
Eucgr.G00887 Eucalyptus grandis HOM05D000092 ORTHO05D000042 6.7e-06 55.1 170 31.2
Lj6A195T24 Lonicera japonica HOM05D000092 ORTHO05D000042 6.7e-06 55.1 144 29.9
Lj6P201T27 Lonicera japonica HOM05D000092 ORTHO05D000042 6.7e-06 55.1 146 32.2
Manes.03G060801 Manihot esculenta HOM05D000092 ORTHO05D000042 6.7e-06 55.1 164 27.4
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 6.7e-06 55.1 93 35.5
Medtr1g036750 Medicago truncatula HOM05D000092 ORTHO05D000042 6.7e-06 55.1 95 35.8
Sabra13G0014100 Salix brachista HOM05D000092 ORTHO05D000042 6.7e-06 55.1 124 29.0
Sabra13G0015000 Salix brachista HOM05D000092 ORTHO05D000042 6.7e-06 55.1 218 24.3
CiPaw.08G174800 Carya illinoinensis HOM05D000092 ORTHO05D000042 8.7e-06 54.7 169 29.0
Glyma.01G072400 Glycine max HOM05D000092 ORTHO05D000042 8.7e-06 54.7 124 29.8
Oeu027648.2 Olea europaea HOM05D000092 ORTHO05D000042 8.7e-06 54.7 101 28.7
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 8.7e-06 54.7 141 24.1
PGR031G1624 Punica granatum HOM05D000092 ORTHO05D000042 8.7e-06 54.7 185 22.2
Rhsim04G0054000 Rhododendron simsii HOM05D000092 ORTHO05D000042 8.7e-06 54.7 183 26.8
Sabra13G0028000 Salix brachista HOM05D000092 ORTHO05D000042 8.7e-06 54.7 141 23.4
Thecc.05G297300 Theobroma cacao HOM05D000092 ORTHO05D000042 8.7e-06 54.7 127 27.6


User provided reference genes

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