Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6C11T4 Lonicera japonica HOM05D001647 ORTHO05D017173 6.6e-73 277.3 145 100.0
Dinv22746 Davidia involucrata HOM05D001647 ORTHO05D001191 1.3e-31 140.2 149 59.1
Lj3A10G10 Lonicera japonica HOM05D001647 ORTHO05D001191 2.8e-31 139.0 126 67.5
CSS0009907 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D017173 9.9e-29 130.6 141 60.3
QL01p055435 Quercus lobata HOM05D001647 ORTHO05D017173 9.9e-29 130.6 142 56.3
CSS0045042 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D017173 1.3e-28 130.2 132 63.6
Atru.chr4.2956 Acer truncatum HOM05D001647 ORTHO05D001191 3.8e-28 128.6 122 60.7
QL10p050116 Quercus lobata HOM05D001647 ORTHO05D001191 1.4e-27 126.7 142 54.9
Duzib212G0802 Durio zibethinus HOM05D001647 ORTHO05D001191 3.5e-26 122.1 149 54.4
Prupe.1G196500 Prunus persica HOM05D001647 ORTHO05D001191 1.0e-25 120.6 121 58.7
Cfa015176 Carpinus fangiana HOM05D001647 ORTHO05D001191 1.1e-24 117.1 102 67.6
ClCG10G015540 Citrullus lanatus HOM05D001647 ORTHO05D001191 1.1e-24 117.1 142 53.5
Aqoxy6G01582 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 1.5e-24 116.7 148 54.1
COL.COLO4_16174 Corchorus olitorius HOM05D001647 ORTHO05D001191 1.5e-24 116.7 102 62.7
Aqoxy6G01579 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 1.9e-24 116.3 148 54.1
Gohir.A09G211500 Gossypium hirsutum HOM05D001647 ORTHO05D001191 2.5e-24 115.9 146 52.7
MD04G1042300 Malus domestica HOM05D001647 ORTHO05D001191 2.5e-24 115.9 130 57.7
Thecc.04G177300 Theobroma cacao HOM05D001647 ORTHO05D001191 4.3e-24 115.2 109 61.5
CiPaw.02G054100 Carya illinoinensis HOM05D001647 ORTHO05D001191 5.6e-24 114.8 147 50.3
Cc04_g16720 Coffea canephora HOM05D001647 ORTHO05D001191 1.3e-23 113.6 147 51.0
Gorai.006G229000 Gossypium raimondii HOM05D001647 ORTHO05D001191 1.3e-23 113.6 146 52.1
MBI08_g20601_MAGBIO Magnolia biondii HOM05D001647 ORTHO05D001191 1.6e-23 113.2 148 53.4
Manes.04G043600 Manihot esculenta HOM05D001647 ORTHO05D001191 3.7e-23 112.1 141 55.3
RcHm_v2.0_Chr4g0406531 Rosa chinensis HOM05D001647 ORTHO05D001191 6.2e-23 111.3 98 62.2
Gohir.D09G205000 Gossypium hirsutum HOM05D001647 ORTHO05D001191 8.2e-23 110.9 153 49.7
CSS0014342 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D017173 1.1e-22 110.5 83 75.9
Rhsim02G0081300 Rhododendron simsii HOM05D001647 ORTHO05D001191 1.1e-22 110.5 145 51.7
CARHR121430 Cardamine hirsuta HOM05D001647 ORTHO05D001191 1.8e-22 109.8 148 51.4
Nn1g09609 Nelumbo nucifera HOM05D001647 ORTHO05D001191 1.8e-22 109.8 148 50.7
SGA_v2.0_scaffold221G42702 Striga asiatica HOM05D001647 ORTHO05D001191 3.1e-22 109.0 79 74.7
Cc03_g11950 Coffea canephora HOM05D001647 ORTHO05D001191 4.0e-22 108.6 147 49.0
AUR62002323 Chenopodium quinoa HOM05D001647 ORTHO05D001191 9.0e-22 107.5 147 51.7
Sc19g0002950 Simmondsia chinensis HOM05D001647 ORTHO05D001191 9.0e-22 107.5 120 58.3
Ca_20792_v3 Cicer arietinum L. HOM05D001647 ORTHO05D001191 1.5e-21 106.7 90 64.4
THA.LOC104815857 Tarenaya hassleriana HOM05D001647 ORTHO05D001191 2.0e-21 106.3 151 49.7
Ciclev10020228m.g Citrus clementina HOM05D001647 ORTHO05D001191 2.6e-21 105.9 109 56.9
DCAR_009853 Daucus carota HOM05D001647 ORTHO05D001191 4.5e-21 105.1 148 49.3
Sabra07G0105500 Salix brachista HOM05D001647 ORTHO05D001191 5.8e-21 104.8 95 63.2
Sp4g11300 Schrenkiella parvula HOM05D001647 ORTHO05D001191 5.8e-21 104.8 148 49.3
Aa31LG5G7750 Aethionema arabicum HOM05D001528 ORTHO05D002760 7.6e-21 104.4 151 48.3
Potri.007G129600 Populus trichocarpa HOM05D001647 ORTHO05D001191 7.6e-21 104.4 130 56.2
AL4G21530 Arabidopsis lyrata HOM05D001647 ORTHO05D001191 1.7e-20 103.2 150 48.7
Hund03168 Selenicereus undatus HOM05D001647 ORTHO05D017173 1.7e-20 103.2 102 58.8
MSTRG.27406 Avicennia marina HOM05D001647 ORTHO05D001191 2.9e-20 102.4 148 48.6
BcaC01g04968 Brassica carinata HOM05D001647 ORTHO05D001191 1.1e-19 100.5 147 50.3
BolC3t15505H Brassica oleracea HOM05D001647 ORTHO05D001191 1.1e-19 100.5 147 50.3
TWI15G0581 Tripterygium wilfordii HOM05D001647 ORTHO05D001191 1.1e-19 100.5 151 50.3
Ah.07g202130 Amaranthus hybridus HOM05D001647 ORTHO05D001191 2.5e-19 99.4 113 58.4
Phvul.011G053900 Phaseolus vulgaris HOM05D001647 ORTHO05D001191 2.5e-19 99.4 82 68.3
VMungo1127G2188 Vigna mungo HOM05D001647 ORTHO05D001191 2.5e-19 99.4 83 67.5
AUR62023863 Chenopodium quinoa HOM05D001647 ORTHO05D001191 3.2e-19 99.0 149 49.0
AT2G28480 Arabidopsis thaliana HOM05D001647 ORTHO05D001191 4.2e-19 98.6 144 47.9
Thhalv10016829m.g Eutrema salsugineum HOM05D001647 ORTHO05D001191 5.5e-19 98.2 148 49.3
Lsat_1_v5_gn_1_77501 Lactuca sativa HOM05D001647 ORTHO05D001191 5.5e-19 98.2 161 45.3
C03p31620 Brassica napus HOM05D001647 ORTHO05D001191 7.1e-19 97.8 147 49.0
Lalb_Chr03g0026081 Lupinus albus HOM05D001647 ORTHO05D001191 7.1e-19 97.8 147 48.3
A03p26360 Brassica napus HOM05D001647 ORTHO05D001191 9.3e-19 97.4 144 45.8
Peaxi162Scf00141g00924 Petunia axillaris HOM05D001647 ORTHO05D001191 1.6e-18 96.7 121 49.6
PGSC0003DMG400011786 Solanum tuberosum HOM05D001647 ORTHO05D001191 1.6e-18 96.7 120 55.0
EL10Ac3g05979 Beta vulgaris HOM05D001647 ORTHO05D001191 2.1e-18 96.3 95 63.2
ECA248G3160 Erigeron canadensis HOM05D001647 ORTHO05D001191 2.1e-18 96.3 144 47.2
Cpa.g.sc9.296 Carica papaya HOM05D001647 ORTHO05D001191 2.7e-18 95.9 102 54.9
BcaB01g03105 Brassica carinata HOM05D001647 ORTHO05D001191 3.5e-18 95.5 108 52.8
Migut.D01562 Erythranthe guttata HOM05D001647 ORTHO05D001191 6.0e-18 94.7 121 48.8
FvH4_4g10890 Fragaria vesca HOM05D001647 ORTHO05D001191 7.9e-18 94.4 99 56.6
CSS0046209 Camellia sinensis var. sinensis HOM05D001647 ORTHO05D017173 1.0e-17 94.0 71 73.2
Carub.0004s0942 Capsella rubella HOM05D001647 ORTHO05D001191 1.0e-17 94.0 146 47.3
unitig_37.g12021 Utricularia gibba HOM05D001647 ORTHO05D001191 1.0e-17 94.0 87 62.1
FAN12G2494 Fragaria x ananassa HOM05D001647 ORTHO05D001191 3.9e-17 92.0 99 54.5
FAN17G2196 Fragaria x ananassa HOM05D001647 ORTHO05D001191 3.9e-17 92.0 99 55.6
Lj3g0005963 Lotus japonicus HOM05D001647 ORTHO05D001191 3.9e-17 92.0 148 50.7
Solyc09g005270.3 Solanum lycopersicum HOM05D001647 ORTHO05D001191 3.9e-17 92.0 121 52.9
ATR0824G265 Amborella trichopoda HOM05D001647 ORTHO05D017173 6.7e-17 91.3 122 54.9
MELO3C009824.2 Cucumis melo HOM05D001647 ORTHO05D001191 6.7e-17 91.3 142 47.2
C04p22880 Brassica napus HOM05D001647 ORTHO05D001191 8.7e-17 90.9 143 44.8
Psat7g209920 Pisum sativum HOM05D001647 ORTHO05D001191 1.5e-16 90.1 142 46.5
SalBow3G2902 Salvia bowleyana HOM05D001647 ORTHO05D001191 1.9e-16 89.7 111 51.4
Sopen09g001240 Solanum pennellii HOM05D001647 ORTHO05D001191 2.5e-16 89.4 121 52.1
FAN07G0844 Fragaria x ananassa HOM05D001647 ORTHO05D001191 2.2e-15 86.3 99 52.5
CAN.G1002.19 Capsicum annuum HOM05D001647 ORTHO05D001191 2.8e-15 85.9 98 52.0
Oeu053823.2 Olea europaea HOM05D001647 ORTHO05D001191 6.3e-15 84.7 85 56.5
Sed0028231 Sechium edule HOM05D001647 ORTHO05D001191 6.3e-15 84.7 142 47.2
Glyma.12G051900 Glycine max HOM05D001647 ORTHO05D001191 8.2e-15 84.3 83 60.2
BolC4t23784H Brassica oleracea HOM05D001647 ORTHO05D001191 1.1e-14 84.0 143 43.4
Os01g0958400 Oryza sativa ssp. japonica HOM05D001647 ORTHO05D001191 3.1e-14 82.4 140 42.1
HanXRQChr01g0023811 Helianthus annuus HOM05D001647 ORTHO05D001191 6.9e-14 81.3 150 43.3
CsaV3_3G040890 Cucumis sativus L. HOM05D001647 ORTHO05D001191 9.0e-14 80.9 141 44.7
Medtr4g067300 Medicago truncatula HOM05D001647 ORTHO05D001191 2.0e-13 79.7 81 56.8
PSO732G0352 Papaver somniferum HOM05D000793 ORTHO05D001191 2.2e-12 76.3 149 44.3
Zm00001eb140480 Zea mays HOM05D001647 ORTHO05D001191 3.8e-12 75.5 86 50.0
Eucgr.A00093 Eucalyptus grandis HOM05D001647 ORTHO05D001191 1.4e-11 73.6 105 48.6
CDE02G4217 Ceratophyllum demersum HOM05D001647 ORTHO05D001191 3.2e-11 72.4 64 64.1
BcaB02g10162 Brassica carinata HOM05D001647 ORTHO05D001191 7.2e-11 71.2 144 41.7
arahy.Tifrunner.gnm1.ann1.G4MAIF Arachis hypogaea HOM05D001647 ORTHO05D001191 1.2e-10 70.5 150 40.7
PGR083G0602 Punica granatum HOM05D001647 ORTHO05D001191 1.2e-10 70.5 132 40.9
Actinidia34598 Actinidia chinensis HOM05D001647 ORTHO05D017173 4.6e-10 68.6 105 48.6
arahy.Tifrunner.gnm1.ann1.0Q1I8G Arachis hypogaea HOM05D001647 ORTHO05D001191 6.1e-10 68.2 150 40.0
Nitab4.5_0000511g0050 Nicotiana tabacum HOM05D001647 ORTHO05D001191 2.3e-09 66.2 101 44.6
PGSC0003DMG400015335 Solanum tuberosum HOM05D001647 ORTHO05D001191 5.1e-09 65.1 110 44.5
Cc03_g12360 Coffea canephora HOM05D001647 ORTHO05D001191 1.1e-08 63.9 48 72.9
Rhsim05G0023400 Rhododendron simsii HOM05D010576 ORTHO05D012109 1.1e-08 63.9 127 41.7
Solyc12g014280.2 Solanum lycopersicum HOM05D001647 ORTHO05D001191 2.5e-08 62.8 119 39.5
Nitab4.5_0000335g0080 Nicotiana tabacum HOM05D001647 ORTHO05D001191 5.7e-08 61.6 101 44.6
GSVIVG01010789001 Vitis vinifera HOM05D001647 ORTHO05D001191 9.7e-08 60.8 46 73.9
TPR.G34241 Trifolium pratense HOM05D001647 ORTHO05D001191 4.8e-07 58.5 126 38.1
Sopen12g006070 Solanum pennellii HOM05D001647 ORTHO05D001191 2.4e-06 56.2 118 37.3
Aqoxy6G01580 Aquilegia oxysepala HOM05D001647 ORTHO05D001191 4.1e-06 55.5 94 45.7


User provided reference genes

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