Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A88T9 Lonicera japonica HOM05D018958 ORTHO05D000167 2.1e-102 375.6 173 100.0
Lj6C95T3 Lonicera japonica HOM05D018958 ORTHO05D000167 1.7e-75 286.2 173 80.3
Lj1C222T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.5e-39 166.8 155 55.5
Lj6A354G19 Lonicera japonica HOM05D018958 ORTHO05D000167 2.6e-36 156.0 169 47.9
Lj6P349T18 Lonicera japonica HOM05D000003 ORTHO05D000004 2.5e-34 149.4 132 55.3
Lj4C754G7 Lonicera japonica HOM05D000003 ORTHO05D000167 1.9e-18 96.7 164 31.1
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 3.0e-16 89.4 158 31.0
Lj4C877T10 Lonicera japonica HOM05D000003 ORTHO05D000167 1.5e-15 87.0 147 32.0
Lj1A1011T54 Lonicera japonica HOM05D000003 ORTHO05D000167 3.4e-15 85.9 189 28.0
Lj8C225G9 Lonicera japonica HOM05D000003 ORTHO05D000004 7.5e-15 84.7 82 47.6
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 8.3e-14 81.3 79 44.3
Lj9P485T48 Lonicera japonica HOM05D018958 ORTHO05D000167 7.0e-13 78.2 54 59.3
Lj6C57T5 Lonicera japonica HOM05D000073 ORTHO05D000033 1.3e-11 73.9 68 44.1
Lj1C1011T5 Lonicera japonica HOM05D018958 ORTHO05D000167 1.7e-11 73.6 41 75.6
TWI56G1451 Tripterygium wilfordii HOM05D000003 ORTHO05D000167 1.7e-11 73.6 152 29.6
Lj1C134T2 Lonicera japonica HOM05D000003 ORTHO05D000167 2.2e-11 73.2 74 43.2
Lj4C747T2 Lonicera japonica HOM05D000003 ORTHO05D000004 2.9e-11 72.8 77 44.2
CANSAT21G2319 Cannabis sativa HOM05D000003 ORTHO05D000004 5.0e-11 72.0 139 28.8
CANSAT78G0387 Cannabis sativa HOM05D000003 ORTHO05D000167 5.0e-11 72.0 143 26.6
Lj3P825T21 Lonicera japonica HOM05D018958 ORTHO05D000167 1.9e-10 70.1 76 42.1
Manes.16G107751 Manihot esculenta HOM05D000003 ORTHO05D000004 1.9e-10 70.1 122 31.1
CANSAT56G2362 Cannabis sativa HOM05D000003 ORTHO05D000167 2.5e-10 69.7 139 28.1
CANSAT56G0533 Cannabis sativa HOM05D000003 ORTHO05D000004 7.2e-10 68.2 163 27.0
Lj2P382T20 Lonicera japonica HOM05D018958 ORTHO05D000167 9.4e-10 67.8 74 39.2
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 9.4e-10 67.8 79 40.5
CANSAT11G2283 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-09 67.4 140 27.1
CANSAT80G0248 Cannabis sativa HOM05D000003 ORTHO05D000004 1.2e-09 67.4 155 30.3
Lj5P270T39 Lonicera japonica HOM05D000003 ORTHO05D000004 2.1e-09 66.6 66 42.4
CANSAT21G1403 Cannabis sativa HOM05D000003 ORTHO05D000004 2.7e-09 66.2 168 27.4
Lj4C411T5 Lonicera japonica HOM05D000003 ORTHO05D000167 2.7e-09 66.2 76 40.8
CANSAT01G2972 Cannabis sativa HOM05D000003 ORTHO05D000004 3.6e-09 65.9 136 30.9
Manes.15G185801 Manihot esculenta HOM05D000003 ORTHO05D000167 8.0e-09 64.7 173 23.7
Manes.05G188350 Manihot esculenta HOM05D000003 ORTHO05D000004 1.0e-08 64.3 179 24.6
CANSAT13G0006 Cannabis sativa HOM05D000003 ORTHO05D000167 1.8e-08 63.5 126 29.4
Lj4P801T19 Lonicera japonica HOM05D000003 ORTHO05D000004 1.8e-08 63.5 126 34.1
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 1.8e-08 63.5 132 30.3
CANSAT78G0561 Cannabis sativa HOM05D000003 ORTHO05D000167 2.3e-08 63.2 166 24.1
Lj6P43T37 Lonicera japonica HOM05D000003 ORTHO05D000004 3.0e-08 62.8 80 33.8
Lj2P248T48 Lonicera japonica HOM05D000003 ORTHO05D020832 6.8e-08 61.6 67 44.8
Manes.10G073050 Manihot esculenta HOM05D000003 ORTHO05D000167 6.8e-08 61.6 183 25.7
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 8.8e-08 61.2 230 24.8
CANSAT25G0172 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-07 60.8 162 29.6
Lj2P1018T21 Lonicera japonica HOM05D000003 ORTHO05D000167 1.5e-07 60.5 75 36.0
Manes.10G106150 Manihot esculenta HOM05D000003 ORTHO05D000004 1.5e-07 60.5 166 24.7
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 2.0e-07 60.1 162 27.8
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 59.7 231 21.6
CANSAT56G1073 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 59.7 75 34.7
CANSAT80G0065 Cannabis sativa HOM05D000003 ORTHO05D000004 2.6e-07 59.7 135 31.1
CANSAT78G2359 Cannabis sativa HOM05D000003 ORTHO05D000167 3.4e-07 59.3 159 27.0
Lj8C245T10 Lonicera japonica HOM05D000003 ORTHO05D000167 3.4e-07 59.3 79 35.4
Manes.12G101201 Manihot esculenta HOM05D000003 ORTHO05D000004 3.4e-07 59.3 196 23.5
CANSAT21G0177 Cannabis sativa HOM05D000003 ORTHO05D000167 4.4e-07 58.9 143 24.5
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-07 58.9 163 22.1
CANSAT56G0362 Cannabis sativa HOM05D000003 ORTHO05D000004 4.4e-07 58.9 221 25.3
RcHm_v2.0_Chr3g0481921 Rosa chinensis HOM05D000003 ORTHO05D000004 4.4e-07 58.9 160 23.8
CANSAT01G1836 Cannabis sativa HOM05D000003 ORTHO05D000167 5.7e-07 58.5 127 29.1
Manes.15G179404 Manihot esculenta HOM05D000003 ORTHO05D000167 5.7e-07 58.5 138 26.1
CANSAT56G2867 Cannabis sativa HOM05D000003 ORTHO05D000167 9.8e-07 57.8 165 26.1
CANSAT56G4532 Cannabis sativa HOM05D000003 ORTHO05D000167 9.8e-07 57.8 75 36.0
Lj1g0015020 Lotus japonicus HOM05D000003 ORTHO05D001406 9.8e-07 57.8 154 27.9
Manes.10G125312 Manihot esculenta HOM05D000003 ORTHO05D000167 9.8e-07 57.8 199 24.1
Lj7C484T13 Lonicera japonica HOM05D000003 ORTHO05D000167 1.3e-06 57.4 80 33.8
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 1.7e-06 57.0 83 32.5
CANSAT21G2540 Cannabis sativa HOM05D000003 ORTHO05D000167 1.7e-06 57.0 166 24.7
CANSAT21G2614 Cannabis sativa HOM05D000003 ORTHO05D000167 2.2e-06 56.6 158 24.7
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 2.2e-06 56.6 166 27.1
QL02p082090 Quercus lobata HOM05D000003 ORTHO05D000167 2.2e-06 56.6 177 28.2
CANSAT21G2087 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-06 56.2 133 26.3
CANSAT80G0435 Cannabis sativa HOM05D000003 ORTHO05D000167 2.8e-06 56.2 158 27.8
Lj3P442T6 Lonicera japonica HOM05D000003 ORTHO05D000004 3.7e-06 55.8 80 30.0
CSS0043774 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000167 4.9e-06 55.5 163 26.4
CANSAT25G1903 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-06 55.5 162 22.8
CANSAT64G0596 Cannabis sativa HOM05D000003 ORTHO05D000167 4.9e-06 55.5 121 26.4
Lj1C50T12 Lonicera japonica HOM05D000003 ORTHO05D000004 4.9e-06 55.5 55 38.2
CANSAT01G2533 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-06 55.1 82 30.5
CANSAT56G3299 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-06 55.1 75 34.7
CANSAT64G2653 Cannabis sativa HOM05D000003 ORTHO05D000167 6.3e-06 55.1 195 23.6
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 6.3e-06 55.1 95 32.6
CANSAT11G0192 Cannabis sativa HOM05D000003 ORTHO05D000004 8.3e-06 54.7 153 25.5
CANSAT35G0207 Cannabis sativa HOM05D000003 ORTHO05D000167 8.3e-06 54.7 159 26.4


User provided reference genes

Program Settings