Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A834T26 Lonicera japonica HOM05D006885 ORTHO05D008606 1.9e-37 158.7 79 100.0
Hma1.2p1_0459F.1_g157320 Hydrangea macrophylla HOM05D006885 ORTHO05D008606 2.7e-28 128.3 72 84.7
PGR119G0226 Punica granatum HOM05D006885 ORTHO05D008606 7.8e-28 126.7 76 81.6
Cfa008736 Carpinus fangiana HOM05D000120 ORTHO05D000068 5.1e-27 124.0 75 78.7
Eucgr.B03538 Eucalyptus grandis HOM05D006885 ORTHO05D008606 5.6e-26 120.6 78 74.4
CiPaw.05G104600 Carya illinoinensis HOM05D006885 ORTHO05D008606 9.6e-26 119.8 75 77.3
Ciclev10033198m.g Citrus clementina HOM05D006885 ORTHO05D008606 1.2e-25 119.4 76 76.3
CiPaw.06G106900 Carya illinoinensis HOM05D006885 ORTHO05D008606 2.1e-25 118.6 77 75.3
Prupe.1G220300 Prunus persica HOM05D006885 ORTHO05D008606 2.1e-25 118.6 76 73.7
Migut.K00992 Erythranthe guttata HOM05D006885 ORTHO05D008606 2.8e-25 118.2 71 80.3
Atru.chr11.2397 Acer truncatum HOM05D006885 ORTHO05D008606 4.7e-25 117.5 72 77.8
Duzib248G1150 Durio zibethinus HOM05D006885 ORTHO05D008606 6.2e-25 117.1 71 80.3
Duzib052G0936 Durio zibethinus HOM05D006885 ORTHO05D008606 8.1e-25 116.7 71 78.9
ECA232G0525 Erigeron canadensis HOM05D006885 ORTHO05D008606 8.1e-25 116.7 75 74.7
Manes.11G080000 Manihot esculenta HOM05D006885 ORTHO05D008606 1.4e-24 115.9 75 72.0
TWI75G1759 Tripterygium wilfordii HOM05D006885 ORTHO05D008606 1.4e-24 115.9 71 76.1
FvH4_4g23120 Fragaria vesca HOM05D006885 ORTHO05D008606 1.8e-24 115.5 70 78.6
FAN07G1762 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.8e-24 115.5 70 78.6
FAN12G2334 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.8e-24 115.5 70 78.6
FAN17G2783 Fragaria x ananassa HOM05D006885 ORTHO05D008606 1.8e-24 115.5 70 78.6
Nn2g15930 Nelumbo nucifera HOM05D006885 ORTHO05D008606 1.8e-24 115.5 71 77.5
Sabra16G0207500 Salix brachista HOM05D006885 ORTHO05D008606 1.8e-24 115.5 75 72.0
Actinidia19564 Actinidia chinensis HOM05D006885 ORTHO05D008606 2.4e-24 115.2 67 79.1
MD13G1125100 Malus domestica HOM05D006885 ORTHO05D008606 3.1e-24 114.8 76 73.7
Peaxi162Scf00962g00024 Petunia axillaris HOM05D006885 ORTHO05D008606 3.1e-24 114.8 76 75.0
Dinv33305 Davidia involucrata HOM05D006885 ORTHO05D008606 5.2e-24 114.0 63 82.5
Manes.04G090052 Manihot esculenta HOM05D006885 ORTHO05D008606 5.2e-24 114.0 75 70.7
Potri.001G325000 Populus trichocarpa HOM05D006885 ORTHO05D008606 5.2e-24 114.0 75 70.7
ClCG06G001860 Citrullus lanatus HOM05D006885 ORTHO05D008606 6.9e-24 113.6 71 76.1
RcHm_v2.0_Chr4g0429451 Rosa chinensis HOM05D006885 ORTHO05D008606 6.9e-24 113.6 70 75.7
Lsat_1_v5_gn_4_1780 Lactuca sativa HOM05D006885 ORTHO05D008606 1.2e-23 112.8 65 83.1
Dinv25633 Davidia involucrata HOM05D006885 ORTHO05D008606 1.5e-23 112.5 76 69.7
Nitab4.5_0000913g0010 Nicotiana tabacum HOM05D006885 ORTHO05D008606 1.5e-23 112.5 63 82.5
Cc11_g17420 Coffea canephora HOM05D006885 ORTHO05D008606 2.0e-23 112.1 74 75.7
Gorai.012G125400 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.0e-23 112.1 66 80.3
Oeu011334.1 Olea europaea HOM05D006885 ORTHO05D008606 2.0e-23 112.1 77 70.1
MD16G1125900 Malus domestica HOM05D006885 ORTHO05D008606 2.6e-23 111.7 76 72.4
CANSAT01G1896 Cannabis sativa HOM05D006885 ORTHO05D008606 4.4e-23 110.9 57 89.5
Gohir.A04G101300 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.8e-23 110.5 64 81.2
Gohir.D04G140400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 5.8e-23 110.5 66 78.8
Sed0025765 Sechium edule HOM05D006885 ORTHO05D008606 9.9e-23 109.8 61 80.3
Aqoxy5G03235 Aquilegia oxysepala HOM05D006885 ORTHO05D008606 1.3e-22 109.4 76 69.7
CAN.G1264.4 Capsicum annuum HOM05D006885 ORTHO05D008606 1.3e-22 109.4 76 72.4
CsaV3_6G007910 Cucumis sativus L. HOM05D006885 ORTHO05D008606 1.3e-22 109.4 61 83.6
Oeu044483.1 Olea europaea HOM05D006885 ORTHO05D008606 1.3e-22 109.4 74 73.0
unitig_26.g10421 Utricularia gibba HOM05D006885 ORTHO05D008606 1.3e-22 109.4 65 80.0
Thhalv10009236m.g Eutrema salsugineum HOM05D006885 ORTHO05D008606 1.7e-22 109.0 63 82.5
TPR.G15605 Trifolium pratense HOM05D006885 ORTHO05D008606 2.2e-22 108.6 67 74.6
MSTRG.471 Avicennia marina HOM05D006885 ORTHO05D008606 2.9e-22 108.2 56 89.3
DCAR_024641 Daucus carota HOM05D006885 ORTHO05D008606 2.9e-22 108.2 71 73.2
Ca_06520_v3 Cicer arietinum L. HOM05D006885 ORTHO05D008606 3.8e-22 107.8 57 87.7
PSO017G7113 Papaver somniferum HOM05D006885 ORTHO05D008606 3.8e-22 107.8 75 70.7
Psat0s1880g0200 Pisum sativum HOM05D006885 ORTHO05D008606 3.8e-22 107.8 67 77.6
TAR629G2182 Trochodendron aralioides HOM05D006885 ORTHO05D008606 3.8e-22 107.8 75 68.0
LjContig00312_ERROPOS870357g0004846 Lotus japonicus HOM05D006885 ORTHO05D008606 4.9e-22 107.5 65 76.9
Sopen01g005380 Solanum pennellii HOM05D006885 ORTHO05D008606 4.9e-22 107.5 64 79.7
Haze_11752 Corylus avellana HOM05D006885 ORTHO05D008606 6.4e-22 107.1 108 55.6
PGSC0003DMG400011888 Solanum tuberosum HOM05D006885 ORTHO05D008606 1.1e-21 106.3 76 71.1
Medtr3g074700 Medicago truncatula HOM05D006885 ORTHO05D008606 1.9e-21 105.5 67 73.1
AUR62005687 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.2e-21 104.8 62 77.4
AUR62028871 Chenopodium quinoa HOM05D006885 ORTHO05D008606 3.2e-21 104.8 62 77.4
Thecc.02G198000 Theobroma cacao HOM05D006885 ORTHO05D008606 4.2e-21 104.4 68 75.0
Phvul.008G000900 Phaseolus vulgaris HOM05D006885 ORTHO05D008606 5.4e-21 104.0 54 88.9
CARHR027030 Cardamine hirsuta HOM05D006885 ORTHO05D008606 9.3e-21 103.2 62 77.4
Glyma.08G361800 Glycine max HOM05D006885 ORTHO05D008606 9.3e-21 103.2 60 81.7
Carub.0001s2598 Capsella rubella HOM05D006885 ORTHO05D008606 1.6e-20 102.4 61 80.3
AT1G27435 Arabidopsis thaliana HOM05D006885 ORTHO05D008606 2.7e-20 101.7 61 78.7
Glyma.18G300000 Glycine max HOM05D006885 ORTHO05D008606 2.7e-20 101.7 56 83.9
AL1G40850 Arabidopsis lyrata HOM05D006885 ORTHO05D008606 4.6e-20 100.9 65 76.9
SalBow2G1383 Salvia bowleyana HOM05D006885 ORTHO05D008606 1.0e-19 99.8 74 68.9
Sp1g23670 Schrenkiella parvula HOM05D006885 ORTHO05D008606 1.0e-19 99.8 62 77.4
THA.LOC104825479 Tarenaya hassleriana HOM05D006885 ORTHO05D008606 1.3e-19 99.4 59 78.0
SGA_v2.0_scaffold9G04792 Striga asiatica HOM05D006885 ORTHO05D008606 1.7e-19 99.0 104 53.8
Aa31LG7G9990 Aethionema arabicum HOM05D006885 ORTHO05D008606 2.3e-19 98.6 65 72.3
BcaB03g13983 Brassica carinata HOM05D006885 ORTHO05D008606 3.0e-19 98.2 75 66.7
C03p73770 Brassica napus HOM05D006885 ORTHO05D008606 3.0e-19 98.2 64 73.4
GSVIVG01000942001 Vitis vinifera HOM05D006885 ORTHO05D008606 6.6e-19 97.1 61 75.4
BcaC01g01613 Brassica carinata HOM05D006885 ORTHO05D008606 1.5e-18 95.9 64 71.9
BcaC01g06952 Brassica carinata HOM05D006885 ORTHO05D008606 1.5e-18 95.9 62 74.2
A08p26290 Brassica napus HOM05D006885 ORTHO05D008606 1.5e-18 95.9 64 71.9
BolC3t19669H Brassica oleracea HOM05D006885 ORTHO05D008606 1.5e-18 95.9 64 71.9
BraA08t34580Z Brassica rapa HOM05D006885 ORTHO05D008606 1.5e-18 95.9 64 71.9
BcaC06g35293 Brassica carinata HOM05D006885 ORTHO05D008606 2.5e-18 95.1 50 88.0
C07p17740 Brassica napus HOM05D006885 ORTHO05D008606 2.5e-18 95.1 50 88.0
BolC7t42280H Brassica oleracea HOM05D006885 ORTHO05D008606 2.5e-18 95.1 50 88.0
Lalb_Chr10g0091171 Lupinus albus HOM05D006885 ORTHO05D008606 4.3e-18 94.4 54 83.3
A07p11750 Brassica napus HOM05D006885 ORTHO05D008606 5.6e-18 94.0 50 86.0
BraA07t28960Z Brassica rapa HOM05D006885 ORTHO05D008606 5.6e-18 94.0 50 86.0
HPP92_021686 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.3e-17 92.8 56 76.8
EL10Ac6g13573 Beta vulgaris HOM05D006885 ORTHO05D008606 2.1e-17 92.0 69 68.1
SalBow1G0427 Salvia bowleyana HOM05D006885 ORTHO05D008606 2.1e-17 92.0 53 83.0
CDE05G1244 Ceratophyllum demersum HOM05D006885 ORTHO05D008606 4.8e-17 90.9 56 80.4
SHI04153 Sapria himalayana HOM05D006885 ORTHO05D008606 8.1e-17 90.1 75 64.0
HPP92_021628 Vanilla planifolia HOM05D006885 ORTHO05D008606 1.1e-16 89.7 56 75.0
ATR0582G111 Amborella trichopoda HOM05D006885 ORTHO05D008606 2.4e-16 88.6 65 70.8
Dinv09126 Davidia involucrata HOM05D006885 ORTHO05D008606 5.3e-16 87.4 48 83.3
Sc11g0000250 Simmondsia chinensis HOM05D006885 ORTHO05D008606 5.3e-16 87.4 44 88.6
QL03p050754 Quercus lobata HOM05D006885 ORTHO05D008606 6.9e-16 87.0 43 90.7
MELO3C035240.2 Cucumis melo HOM05D006885 ORTHO05D008606 2.0e-15 85.5 46 84.8
Zm00001eb133070 Zea mays HOM05D006885 ORTHO05D008606 2.0e-15 85.5 53 73.6
Ah.03g135790 Amaranthus hybridus HOM05D006885 ORTHO05D008606 3.4e-15 84.7 43 88.4
CSS0038255 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 3.4e-15 84.7 43 88.4
Zm00001eb408880 Zea mays HOM05D006885 ORTHO05D008606 7.6e-15 83.6 50 76.0
Hund25491 Selenicereus undatus HOM05D006885 ORTHO05D008606 9.9e-15 83.2 43 86.0
HanXRQChr03g0067371 Helianthus annuus HOM05D006885 ORTHO05D008606 8.4e-14 80.1 42 85.7
MBI12_g28748_MAGBIO Magnolia biondii HOM05D006885 ORTHO05D008606 7.1e-13 77.0 57 68.4
Gohir.D07G189020 Gossypium hirsutum HOM05D006885 ORTHO05D008606 6.0e-12 73.9 49 71.4
Gorai.001G210600 Gossypium raimondii HOM05D006885 ORTHO05D008606 6.0e-12 73.9 49 71.4
CSS0039361 Camellia sinensis var. sinensis HOM05D006885 ORTHO05D008606 3.0e-11 71.6 37 86.5
Pp3c6_10000 Physcomitrium patens HOM05D006885 ORTHO05D008606 1.5e-10 69.3 68 54.4
Gohir.A06G101502 Gossypium hirsutum HOM05D006885 ORTHO05D008606 1.1e-08 63.2 43 65.1
Gohir.D02G113400 Gossypium hirsutum HOM05D006885 ORTHO05D008606 2.6e-07 58.5 31 80.6
Gorai.005G128300 Gossypium raimondii HOM05D006885 ORTHO05D008606 2.6e-07 58.5 31 80.6
TPR.G7690 Trifolium pratense HOM05D006885 ORTHO05D008606 2.6e-07 58.5 27 88.9
AagrBONN_evm.TU.Sc2ySwM_362.2152 Anthoceros agrestis HOM05D006885 ORTHO05D008606 3.8e-06 54.7 60 50.0


User provided reference genes

Program Settings