Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A812T43 Lonicera japonica HOM05D002002 ORTHO05D008797 7.5e-192 673.7 347 100.0
Dinv15235 Davidia involucrata HOM05D002002 ORTHO05D008797 8.9e-92 341.3 366 53.8
Dinv24786 Davidia involucrata HOM05D002002 ORTHO05D008797 1.1e-86 324.3 366 53.0
GSVIVG01005756001 Vitis vinifera HOM05D002002 ORTHO05D008797 1.7e-71 273.9 370 47.0
Manes.13G024600 Manihot esculenta HOM05D002002 ORTHO05D008797 1.3e-61 241.1 364 43.4
CSS0037172 Camellia sinensis var. sinensis HOM05D002002 ORTHO05D008797 1.6e-61 240.7 364 45.1
Gohir.A04G136700 Gossypium hirsutum HOM05D002002 ORTHO05D008797 2.2e-58 230.3 366 43.4
Actinidia15094 Actinidia chinensis HOM05D002002 ORTHO05D008797 1.1e-57 228.0 360 43.9
vmacro16196 Vaccinium macrocarpon HOM05D002002 ORTHO05D008797 2.4e-57 226.9 356 43.5
Gorai.012G173000 Gossypium raimondii HOM05D002002 ORTHO05D008797 4.2e-57 226.1 366 42.9
Gohir.D04G179800 Gossypium hirsutum HOM05D002002 ORTHO05D008797 3.5e-56 223.0 366 42.6
Thecc.02G259600 Theobroma cacao HOM05D002002 ORTHO05D008797 4.6e-56 222.6 372 41.9
Duzib251G0042 Durio zibethinus HOM05D002002 ORTHO05D008797 7.9e-56 221.9 371 42.0
Nn4g22624 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.0e-55 219.9 363 41.6
Nitab4.5_0009240g0010 Nicotiana tabacum HOM05D002002 ORTHO05D008797 1.1e-54 218.0 370 42.2
Peaxi162Scf00128g00134 Petunia axillaris HOM05D002002 ORTHO05D008797 5.6e-54 215.7 364 42.6
Haze_12247 Corylus avellana HOM05D002002 ORTHO05D008711 1.1e-52 211.5 370 40.8
Migut.K00597 Erythranthe guttata HOM05D002002 ORTHO05D008797 3.1e-52 209.9 367 40.6
Nitab4.5_0000007g0090 Nicotiana tabacum HOM05D002002 ORTHO05D008797 3.1e-52 209.9 367 42.2
TAR374G0715 Trochodendron aralioides HOM05D002002 ORTHO05D008797 4.0e-52 209.5 348 42.0
Atru.chr11.2102 Acer truncatum HOM05D002002 ORTHO05D008797 6.9e-52 208.8 367 42.0
TAR622G0079 Trochodendron aralioides HOM05D002002 ORTHO05D008797 1.2e-51 208.0 350 40.0
Cfa009210 Carpinus fangiana HOM05D002002 ORTHO05D008797 2.0e-51 207.2 370 40.8
QL03p058108 Quercus lobata HOM05D002002 ORTHO05D008797 2.6e-51 206.8 365 39.7
TWI75G1475 Tripterygium wilfordii HOM05D002002 ORTHO05D008797 3.4e-51 206.5 372 41.9
Oeu059906.4 Olea europaea HOM05D002002 ORTHO05D008797 4.5e-51 206.1 368 41.3
SalBow2G1965 Salvia bowleyana HOM05D002002 ORTHO05D008797 2.2e-50 203.8 368 39.4
Cpa.g.sc33.18 Carica papaya HOM05D002002 ORTHO05D008797 4.9e-50 202.6 369 39.3
CiPaw.05G182600 Carya illinoinensis HOM05D002002 ORTHO05D008797 5.4e-49 199.1 362 39.0
Potri.008G186900 Populus trichocarpa HOM05D002002 ORTHO05D008797 2.7e-48 196.8 362 40.6
Potri.010G046000 Populus trichocarpa HOM05D002002 ORTHO05D008797 3.5e-48 196.4 366 40.7
Nn3g16709 Nelumbo nucifera HOM05D002002 ORTHO05D008797 3.9e-47 193.0 368 39.1
CAN.G832.3 Capsicum annuum HOM05D002002 ORTHO05D008797 8.7e-47 191.8 363 41.3
DCAR_031153 Daucus carota HOM05D002002 ORTHO05D008797 8.7e-47 191.8 360 39.7
Psat4g115320 Pisum sativum HOM05D002002 ORTHO05D008797 4.8e-45 186.0 352 38.6
ECA233G4520 Erigeron canadensis HOM05D002002 ORTHO05D008797 6.2e-45 185.7 339 41.0
Sabra08G0141500 Salix brachista HOM05D002002 ORTHO05D008797 1.1e-44 184.9 364 40.1
Duzib248G0209 Durio zibethinus HOM05D002002 ORTHO05D008797 1.8e-44 184.1 368 37.5
arahy.Tifrunner.gnm1.ann1.YSSX7I Arachis hypogaea HOM05D002002 ORTHO05D008797 1.2e-43 181.4 354 38.7
EL10Ac6g13807 Beta vulgaris HOM05D002002 ORTHO05D008797 5.8e-43 179.1 359 38.2
AUR62024280 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.0e-42 178.3 362 38.4
Ca_22584_v3 Cicer arietinum L. HOM05D002002 ORTHO05D008711 1.0e-42 178.3 351 37.9
Lalb_Chr05g0228431 Lupinus albus HOM05D002002 ORTHO05D008797 1.7e-42 177.6 347 37.5
Glyma.18G143900 Glycine max HOM05D002002 ORTHO05D008797 3.8e-42 176.4 352 38.4
arahy.Tifrunner.gnm1.ann1.PHTA8N Arachis hypogaea HOM05D002002 ORTHO05D008711 4.9e-42 176.0 354 38.1
Phvul.003G065200 Phaseolus vulgaris HOM05D002002 ORTHO05D008797 6.5e-42 175.6 350 38.9
Lj4g0017193 Lotus japonicus HOM05D002002 ORTHO05D008797 1.1e-41 174.9 352 38.9
Eucgr.H02500 Eucalyptus grandis HOM05D002002 ORTHO05D008797 3.2e-41 173.3 357 37.3
Glyma.08G282400 Glycine max HOM05D002002 ORTHO05D008797 4.2e-41 172.9 352 38.6
Ciclev10030634m.g Citrus clementina HOM05D002002 ORTHO05D008797 2.7e-40 170.2 364 36.8
PSO478G2109 Papaver somniferum HOM05D002002 ORTHO05D008797 2.7e-40 170.2 346 39.6
PSO017G3282 Papaver somniferum HOM05D002002 ORTHO05D008797 3.5e-40 169.9 346 38.7
CANSAT01G0132 Cannabis sativa HOM05D002002 ORTHO05D008797 1.3e-39 167.9 363 38.0
ATR0824G114 Amborella trichopoda HOM05D002002 ORTHO05D008797 6.7e-39 165.6 359 36.5
Lalb_Chr16g0392181 Lupinus albus HOM05D002002 ORTHO05D008797 6.7e-39 165.6 352 37.2
Sopen05g008360 Solanum pennellii HOM05D002002 ORTHO05D008797 6.7e-39 165.6 363 36.6
AUR62005461 Chenopodium quinoa HOM05D002002 ORTHO05D008797 1.1e-38 164.9 362 36.5
SGA_v2.0_scaffold476G52131 Striga asiatica HOM05D002002 ORTHO05D008797 5.7e-38 162.5 360 39.2
SGA_v2.0_scaffold98G29360 Striga asiatica HOM05D002002 ORTHO05D008797 5.7e-38 162.5 360 39.2
Lsat_1_v5_gn_8_152141 Lactuca sativa HOM05D002002 ORTHO05D008711 6.2e-37 159.1 341 36.7
FAN17G1038 Fragaria x ananassa HOM05D002002 ORTHO05D008711 5.3e-36 156.0 366 35.2
Rhsim12G0110400 Rhododendron simsii HOM05D002002 ORTHO05D008797 6.9e-36 155.6 176 48.3
Oeu029877.3 Olea europaea HOM05D002002 ORTHO05D008797 9.0e-36 155.2 313 37.4
Aqoxy3G01206 Aquilegia oxysepala HOM05D002002 ORTHO05D008797 1.2e-35 154.8 361 38.2
RcHm_v2.0_Chr4g0432951 Rosa chinensis HOM05D002002 ORTHO05D008797 4.5e-35 152.9 364 36.3
MD16G1102300 Malus domestica HOM05D002002 ORTHO05D008797 7.6e-35 152.1 364 35.2
TPR.G17755 Trifolium pratense HOM05D002002 ORTHO05D008711 5.0e-34 149.4 352 34.4
DCAR_007056 Daucus carota HOM05D002002 ORTHO05D008797 1.1e-33 148.3 360 35.3
ClCG05G025730 Citrullus lanatus HOM05D002002 ORTHO05D008797 2.5e-33 147.1 369 35.0
COL.COLO4_24277 Corchorus olitorius HOM05D002002 ORTHO05D008797 7.1e-33 145.6 197 46.7
CsaV3_5G031140 Cucumis sativus L. HOM05D002002 ORTHO05D008797 2.1e-32 144.1 367 35.1
MELO3C011952.2 Cucumis melo HOM05D002002 ORTHO05D008711 1.6e-29 134.4 370 34.6
Sc11g0000970 Simmondsia chinensis HOM05D002002 ORTHO05D008797 2.8e-29 133.7 338 34.9
FvH4_4g25541 Fragaria vesca HOM05D002002 ORTHO05D008797 1.4e-28 131.3 360 33.6
MD13G1101700 Malus domestica HOM05D002002 ORTHO05D008797 3.1e-28 130.2 343 33.2
HanXRQChr08g0208141 Helianthus annuus HOM05D002002 ORTHO05D008797 1.2e-27 128.3 357 34.5
Hund25388 Selenicereus undatus HOM05D002002 ORTHO05D008797 1.0e-26 125.2 362 32.3
Solyc05g013490.4 Solanum lycopersicum HOM05D002002 ORTHO05D008797 3.2e-25 120.2 260 37.3
Sed0005394 Sechium edule HOM05D002002 ORTHO05D008797 3.0e-23 113.6 370 33.5
PGR119G0425 Punica granatum HOM05D002002 ORTHO05D008797 8.2e-21 105.5 342 31.0
FAN22G2309 Fragaria x ananassa HOM05D002002 ORTHO05D008797 2.6e-19 100.5 177 37.9
SEGI_21221 Sequoiadendron giganteum HOM05D002002 ORTHO05D008797 1.9e-17 94.4 384 30.7
TPR.G3029 Trifolium pratense HOM05D002002 ORTHO05D008797 1.0e-15 88.6 174 36.8
TPR.G3025 Trifolium pratense HOM05D002002 ORTHO05D008797 6.7e-15 85.9 172 37.2
Prupe.1G244100 Prunus persica HOM05D002002 ORTHO05D008797 8.8e-15 85.5 107 45.8
BraA02t06728Z Brassica rapa HOM05D002002 ORTHO05D008797 1.8e-12 77.8 345 28.4
Thhalv10018098m.g Eutrema salsugineum HOM05D002002 ORTHO05D008797 7.7e-11 72.4 298 27.5
Cc11_g15720 Coffea canephora HOM05D002002 ORTHO05D008797 2.9e-10 70.5 84 50.0
A02p16740 Brassica napus HOM05D002002 ORTHO05D008797 8.5e-10 68.9 146 34.9
BolC2t08843H Brassica oleracea HOM05D002002 ORTHO05D008797 8.5e-10 68.9 174 31.6
BcaC03g15213 Brassica carinata HOM05D002002 ORTHO05D008797 2.5e-09 67.4 146 34.2
C02p28000 Brassica napus HOM05D002002 ORTHO05D008797 2.5e-09 67.4 146 34.2
BcaB05g24599 Brassica carinata HOM05D002002 ORTHO05D008797 4.2e-09 66.6 146 33.6
Carub.0002s1735 Capsella rubella HOM05D002002 ORTHO05D008797 2.1e-08 64.3 124 37.1
AL2G30050 Arabidopsis lyrata HOM05D002002 ORTHO05D008797 1.0e-07 62.0 146 34.2
Os04g0661700 Oryza sativa ssp. japonica HOM05D002002 ORTHO05D008797 1.5e-06 58.2 353 26.6
CDE07G1782 Ceratophyllum demersum HOM05D002002 ORTHO05D008797 2.0e-06 57.8 314 26.1


User provided reference genes

Program Settings