Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A803T82 Lonicera japonica HOM05D001101 ORTHO05D000893 3.9e-117 424.9 221 100.0
Lj3C23T3 Lonicera japonica HOM05D001101 ORTHO05D000893 1.6e-83 313.2 188 86.7
Lj3C9T2 Lonicera japonica HOM05D001101 ORTHO05D000893 5.3e-82 308.1 188 85.1
Dinv31018 Davidia involucrata HOM05D001101 ORTHO05D000893 3.6e-38 162.5 196 50.5
Dinv31084 Davidia involucrata HOM05D001101 ORTHO05D000893 3.6e-38 162.5 196 50.5
Actinidia32589 Actinidia chinensis HOM05D001101 ORTHO05D000893 3.4e-28 129.4 221 43.4
CSS0003474 Camellia sinensis var. sinensis HOM05D001101 ORTHO05D000893 4.4e-28 129.0 192 42.7
Hma1.2p1_0867F.1_g230380 Hydrangea macrophylla HOM05D001101 ORTHO05D000893 1.3e-27 127.5 203 41.4
vmacro16267 Vaccinium macrocarpon HOM05D001101 ORTHO05D000893 1.7e-27 127.1 199 41.7
Haze_12150 Corylus avellana HOM05D001101 ORTHO05D000893 4.9e-27 125.6 192 40.6
Cfa009112 Carpinus fangiana HOM05D001101 ORTHO05D000893 1.1e-26 124.4 189 41.3
Rhsim12G0122100 Rhododendron simsii HOM05D001101 ORTHO05D000893 1.1e-26 124.4 189 41.3
QL03p061872 Quercus lobata HOM05D001101 ORTHO05D000893 4.1e-26 122.5 176 42.6
CiPaw.05G147500 Carya illinoinensis HOM05D001101 ORTHO05D000893 1.2e-25 120.9 191 40.8
Ciclev10031709m.g Citrus clementina HOM05D001101 ORTHO05D000893 1.2e-25 120.9 190 43.2
Potri.004G087300 Populus trichocarpa HOM05D001101 ORTHO05D000893 1.6e-25 120.6 189 38.6
Oeu001671.1 Olea europaea HOM05D001101 ORTHO05D000893 7.8e-25 118.2 194 40.2
Thecc.02G246100 Theobroma cacao HOM05D001101 ORTHO05D000893 1.0e-24 117.9 200 40.0
Duzib251G0718 Durio zibethinus HOM05D001101 ORTHO05D000893 1.3e-24 117.5 200 42.0
Manes.05G088200 Manihot esculenta HOM05D001101 ORTHO05D000893 2.1e-22 110.2 195 39.5
Prupe.1G256400 Prunus persica HOM05D001101 ORTHO05D000893 1.8e-21 107.1 199 38.2
FAN17G0312 Fragaria x ananassa HOM05D001101 ORTHO05D000893 6.8e-21 105.1 227 37.9
Nitab4.5_0008887g0040 Nicotiana tabacum HOM05D001101 ORTHO05D000893 8.9e-21 104.8 183 37.7
SGA_v2.0_scaffold165G38263 Striga asiatica HOM05D001101 ORTHO05D000893 2.0e-20 103.6 196 38.8
Actinidia15029 Actinidia chinensis HOM05D001101 ORTHO05D000893 1.7e-19 100.5 125 48.8
FAN07G0286 Fragaria x ananassa HOM05D001101 ORTHO05D000893 1.7e-19 100.5 213 39.9
CANSAT01G2699 Cannabis sativa HOM05D001101 ORTHO05D000893 8.3e-19 98.2 220 37.3
FAN12G2180 Fragaria x ananassa HOM05D001101 ORTHO05D000893 8.3e-19 98.2 226 37.6
PGSC0003DMG400004127 Solanum tuberosum HOM05D001101 ORTHO05D000893 1.1e-18 97.8 184 35.9
GSVIVG01020208001 Vitis vinifera HOM05D001101 ORTHO05D000893 1.9e-18 97.1 139 43.9
CAN.G205.9 Capsicum annuum HOM05D001101 ORTHO05D000893 9.2e-18 94.7 184 35.3
Sopen05g001770 Solanum pennellii HOM05D001101 ORTHO05D000893 1.6e-17 94.0 183 33.3
Solyc05g005770.3 Solanum lycopersicum HOM05D001101 ORTHO05D000893 1.7e-16 90.5 180 34.4
SalBow2G1519 Salvia bowleyana HOM05D001101 ORTHO05D000893 6.6e-16 88.6 197 32.0
Cpa.g.sc69.5 Carica papaya HOM05D001101 ORTHO05D000893 8.6e-16 88.2 215 33.5
Migut.L01429 Erythranthe guttata HOM05D001101 ORTHO05D000893 8.6e-16 88.2 111 47.7
PGR102G2733 Punica granatum HOM05D001101 ORTHO05D000893 1.9e-15 87.0 170 37.6
Phvul.003G053200 Phaseolus vulgaris HOM05D001101 ORTHO05D000893 3.3e-15 86.3 225 33.8
HanXRQChr04g0103691 Helianthus annuus HOM05D001101 ORTHO05D000893 2.8e-14 83.2 172 33.7
MD13G1089400 Malus domestica HOM05D001101 ORTHO05D000893 2.8e-14 83.2 192 35.4
VMungo0251G1563 Vigna mungo HOM05D001101 ORTHO05D000893 8.1e-14 81.6 200 34.5
MBI15_g31107_MAGBIO Magnolia biondii HOM05D001101 ORTHO05D000893 1.4e-13 80.9 193 35.2
Lsat_1_v5_gn_4_6680 Lactuca sativa HOM05D001101 ORTHO05D000893 5.2e-13 79.0 213 30.5
DCAR_031090 Daucus carota HOM05D001101 ORTHO05D000893 1.2e-12 77.8 163 30.7
Medtr8g063700 Medicago truncatula HOM05D001101 ORTHO05D000893 1.2e-12 77.8 222 34.2
Glyma.08G288900 Glycine max HOM05D001101 ORTHO05D000893 1.5e-12 77.4 202 35.6
TPR.G31967 Trifolium pratense HOM05D001101 ORTHO05D000893 1.3e-11 74.3 159 37.7
Atru.chr11.1997 Acer truncatum HOM05D001101 ORTHO05D000893 1.7e-11 73.9 165 38.8
AUR62014002 Chenopodium quinoa HOM05D001101 ORTHO05D000893 2.9e-11 73.2 196 33.7
THA.LOC104822132 Tarenaya hassleriana HOM05D001101 ORTHO05D000893 3.8e-11 72.8 186 30.6
ECA234G3646 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.4e-11 72.0 207 31.4
RcHm_v2.0_Chr4g0444161 Rosa chinensis HOM05D001101 ORTHO05D000893 6.4e-11 72.0 173 36.4
AUR62005350 Chenopodium quinoa HOM05D001101 ORTHO05D000893 1.1e-10 71.2 192 32.8
Psat4g127640 Pisum sativum HOM05D001101 ORTHO05D000893 1.4e-10 70.9 198 33.8
EL10Ac6g13648 Beta vulgaris HOM05D001101 ORTHO05D000893 1.2e-09 67.8 190 31.1
PSO384G1315 Papaver somniferum HOM05D001101 ORTHO05D000893 4.6e-09 65.9 123 36.6
COL.COLO4_19522 Corchorus olitorius HOM05D001101 ORTHO05D000893 6.0e-09 65.5 109 44.0
Aqoxy3G03039 Aquilegia oxysepala HOM05D001101 ORTHO05D000893 7.8e-09 65.1 191 31.4
TAR629G2731 Trochodendron aralioides HOM05D001101 ORTHO05D000893 1.0e-08 64.7 116 39.7
MD16G1089600 Malus domestica HOM05D001101 ORTHO05D000893 1.3e-08 64.3 229 33.2
Hund05974 Selenicereus undatus HOM05D001101 ORTHO05D000893 1.7e-08 63.9 193 31.6
Nn4g22843 Nelumbo nucifera HOM05D001101 ORTHO05D000893 5.1e-08 62.4 169 33.1
Ah.02g129810 Amaranthus hybridus HOM05D001101 ORTHO05D000893 7.3e-07 58.5 187 29.4
A09p40950 Brassica napus HOM05D001101 ORTHO05D000893 1.2e-06 57.8 156 32.7
Sp1g21240 Schrenkiella parvula HOM05D001101 ORTHO05D000893 1.6e-06 57.4 158 30.4
BolC5t31006H Brassica oleracea HOM05D001101 ORTHO05D000893 2.1e-06 57.0 156 32.7
BraA09t39584Z Brassica rapa HOM05D001101 ORTHO05D000893 2.1e-06 57.0 156 32.7
C05p23080 Brassica napus HOM05D001101 ORTHO05D000893 3.6e-06 56.2 143 32.9


User provided reference genes

Program Settings