Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A793G95 Lonicera japonica HOM05D006664 ORTHO05D009007 1.9e-294 1015.0 489 100.0
Lj6A74G24 Lonicera japonica HOM05D006664 ORTHO05D009007 1.1e-127 461.1 432 60.0
Lj2A257T62 Lonicera japonica HOM05D006664 ORTHO05D009007 1.3e-83 314.7 341 51.3
Lj3A762T33 Lonicera japonica HOM05D006664 ORTHO05D009007 1.1e-58 231.9 227 57.7
Lj6C54G11 Lonicera japonica HOM05D006664 ORTHO05D009007 1.2e-54 218.4 269 50.2
Lj6A8G19 Lonicera japonica HOM05D006664 ORTHO05D009007 3.6e-46 190.3 475 33.7
Dinv07586 Davidia involucrata HOM05D006664 ORTHO05D009007 4.1e-34 150.2 290 33.8
CSS0006076 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 5.3e-34 149.8 280 35.4
CSS0029898 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 5.3e-34 149.8 280 35.7
Rhsim08G0071800 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.6e-30 138.3 308 31.2
CSS0003999 Camellia sinensis var. sinensis HOM05D006664 ORTHO05D009007 4.7e-30 136.7 290 33.1
Migut.A00598 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.1e-30 136.3 300 30.3
Dinv12850 Davidia involucrata HOM05D006664 ORTHO05D009007 1.4e-29 135.2 290 32.1
Actinidia38558 Actinidia chinensis HOM05D006664 ORTHO05D009007 5.9e-25 119.8 235 36.6
Actinidia23407 Actinidia chinensis HOM05D006664 ORTHO05D009007 5.5e-23 113.2 223 35.0
Actinidia23408 Actinidia chinensis HOM05D006664 ORTHO05D009007 5.5e-23 113.2 223 35.0
Actinidia27246 Actinidia chinensis HOM05D006664 ORTHO05D009007 5.5e-23 113.2 223 35.0
Migut.A00604 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.8e-22 110.9 316 27.5
TAR575G0001 Trochodendron aralioides HOM05D008437 ORTHO05D008819 1.4e-21 108.6 183 37.7
SGA_v2.0_scaffold305G47956 Striga asiatica HOM05D006664 ORTHO05D009007 1.8e-21 108.2 213 33.8
TAR629G0100 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.2e-21 106.7 179 37.4
Migut.A00619 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.4e-20 104.0 319 28.2
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 4.4e-20 103.6 180 38.9
Migut.A00481 Erythranthe guttata HOM05D006664 ORTHO05D009007 5.7e-20 103.2 199 32.2
Migut.A00617 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.8e-20 102.4 296 28.0
Migut.D00751 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.2e-19 101.3 286 25.9
Migut.A00599 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.8e-19 100.9 314 26.1
Migut.A00601 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.7e-19 100.5 301 27.2
Lj6C54T11 Lonicera japonica HOM05D006664 ORTHO05D009007 3.7e-19 100.5 124 50.0
TAR636G0594 Trochodendron aralioides HOM05D006664 ORTHO05D008819 1.4e-18 98.6 189 33.9
Migut.D00613 Erythranthe guttata HOM05D006664 ORTHO05D009007 4.1e-18 97.1 301 24.9
TAR629G0642 Trochodendron aralioides HOM05D008437 ORTHO05D008819 5.4e-18 96.7 183 37.2
Migut.A00618 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.0e-17 94.7 306 29.4
Rhsim07G0046100 Rhododendron simsii HOM05D006664 ORTHO05D009007 1.0e-16 92.4 187 33.2
CiPaw.05G236300 Carya illinoinensis HOM05D006664 ORTHO05D009007 1.3e-16 92.0 239 28.5
Migut.E01489 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.3e-16 92.0 345 27.2
TAR633G2422 Trochodendron aralioides HOM05D007726 ORTHO05D008819 2.9e-16 90.9 200 33.5
SalBow1G5157 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.0e-16 90.1 329 26.1
Migut.A00602 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.6e-16 89.7 204 27.5
Nn2g13599 Nelumbo nucifera HOM05D008437 ORTHO05D008819 8.6e-16 89.4 216 30.6
Cpa.g.sc73.88 Carica papaya HOM05D006664 ORTHO05D009007 1.9e-15 88.2 232 29.3
Migut.A00600 Erythranthe guttata HOM05D006664 ORTHO05D009007 2.5e-15 87.8 313 26.2
SalBow1G2147 Salvia bowleyana HOM05D006664 ORTHO05D009007 7.3e-15 86.3 291 27.1
TAR633G1810 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.2e-14 85.5 255 31.0
SalBow1G2277 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.6e-14 85.1 327 25.1
Solyc09g012010.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 3.6e-14 84.0 209 29.7
Aqoxy5G04107 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 4.7e-14 83.6 196 32.7
AUR62025056 Chenopodium quinoa HOM05D003636 ORTHO05D013299 4.7e-14 83.6 225 27.1
SalBow1G3006 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.7e-14 83.6 295 25.8
SalBow1G5956 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.7e-14 83.6 365 24.7
SalBow1G7502 Salvia bowleyana HOM05D006664 ORTHO05D009007 8.0e-14 82.8 335 25.4
SalBow1G0567 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.0e-13 82.4 327 25.7
SalBow1G3386 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.0e-13 82.4 286 25.9
SalBow1G6396 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.8e-13 81.6 345 26.1
AUR62043669 Chenopodium quinoa HOM05D000750 ORTHO05D013299 3.0e-13 80.9 232 28.9
AUR62043803 Chenopodium quinoa HOM05D000750 ORTHO05D013299 3.0e-13 80.9 232 28.9
Nn1g09442 Nelumbo nucifera HOM05D007726 ORTHO05D008819 3.0e-13 80.9 219 28.8
Sopen03g021420 Solanum pennellii HOM05D008437 ORTHO05D010577 4.0e-13 80.5 213 28.6
AUR62031665 Chenopodium quinoa HOM05D003636 ORTHO05D013299 5.2e-13 80.1 200 28.5
SalBow1G5395 Salvia bowleyana HOM05D006664 ORTHO05D009007 5.2e-13 80.1 291 24.7
SGA_v2.0_scaffold69G23259 Striga asiatica HOM05D006664 ORTHO05D009007 5.2e-13 80.1 204 30.9
COL.COLO4_15201 Corchorus olitorius HOM05D008547 ORTHO05D010515 6.8e-13 79.7 187 28.3
Migut.D00754 Erythranthe guttata HOM05D006664 ORTHO05D009007 6.8e-13 79.7 288 24.7
SalBow1G5785 Salvia bowleyana HOM05D006664 ORTHO05D009007 6.8e-13 79.7 356 23.6
Solyc03g078530.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 6.8e-13 79.7 223 28.3
Sopen09g006830 Solanum pennellii HOM05D008437 ORTHO05D010577 6.8e-13 79.7 213 28.6
CSS0044623 Camellia sinensis var. sinensis HOM05D008437 ORTHO05D010577 8.9e-13 79.3 219 30.1
AUR62043804 Chenopodium quinoa HOM05D000750 ORTHO05D013299 8.9e-13 79.3 232 28.9
AUR62044330 Chenopodium quinoa HOM05D000750 ORTHO05D013299 8.9e-13 79.3 232 28.9
SalBow1G4503 Salvia bowleyana HOM05D000486 ORTHO05D009007 1.2e-12 79.0 327 25.4
SalBow1G1774 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-12 78.6 343 24.8
SalBow1G3269 Salvia bowleyana HOM05D006664 ORTHO05D009007 1.5e-12 78.6 319 25.4
TAR381G1565 Trochodendron aralioides HOM05D007726 ORTHO05D008819 1.5e-12 78.6 238 30.7
Atru.chr8.2143 Acer truncatum HOM05D008437 ORTHO05D010577 2.0e-12 78.2 228 27.6
SalBow1G5259 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.0e-12 78.2 336 23.2
PGSC0003DMG400046101 Solanum tuberosum HOM05D008437 ORTHO05D010577 2.0e-12 78.2 213 26.8
SalBow1G2059 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.4e-12 77.4 321 25.5
Rhsim05G0205500 Rhododendron simsii HOM05D008437 ORTHO05D010577 4.4e-12 77.0 226 30.1
SalBow1G1867 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.4e-12 77.0 336 23.2
Hma1.2p1_0244F.1_g101190 Hydrangea macrophylla HOM05D008437 ORTHO05D010577 5.7e-12 76.6 222 27.0
Migut.D00614 Erythranthe guttata HOM05D006664 ORTHO05D009007 9.8e-12 75.9 301 22.9
Oeu000542.1 Olea europaea HOM05D007726 ORTHO05D008819 1.3e-11 75.5 187 32.1
Aqoxy7G00350 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 1.7e-11 75.1 216 28.2
SalBow1G1954 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.2e-11 74.7 319 25.7
SalBow1G4853 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.2e-11 74.7 319 25.7
SalBow4G1294 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.2e-11 74.7 336 24.1
Nn1g09443 Nelumbo nucifera HOM05D007726 ORTHO05D008819 2.9e-11 74.3 207 29.0
SalBow1G7640 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.9e-11 74.3 317 23.7
Psat4g206720 Pisum sativum HOM05D008547 ORTHO05D010515 3.7e-11 73.9 221 28.1
SalBow1G1554 Salvia bowleyana HOM05D006664 ORTHO05D009007 3.7e-11 73.9 333 23.7
SalBow1G0151 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.9e-11 73.6 324 24.4
SalBow1G6969 Salvia bowleyana HOM05D006664 ORTHO05D009007 4.9e-11 73.6 220 26.4
SGA_v2.0_scaffold227G43212 Striga asiatica HOM05D006664 ORTHO05D009007 4.9e-11 73.6 284 26.1
Dinv12853 Davidia involucrata HOM05D006664 ORTHO05D009007 6.4e-11 73.2 95 40.0
QL07p036071 Quercus lobata HOM05D008437 ORTHO05D010577 6.4e-11 73.2 235 28.1
CiPaw.02G099600 Carya illinoinensis HOM05D006664 ORTHO05D009007 8.3e-11 72.8 225 25.3
Peaxi162Scf00141g00138 Petunia axillaris HOM05D008437 ORTHO05D010577 1.1e-10 72.4 212 26.9
Atru.chr8.2145 Acer truncatum HOM05D008437 ORTHO05D010577 1.4e-10 72.0 317 25.2
Aqoxy6G01586 Aquilegia oxysepala HOM05D063209 ORTHO05D021355 1.4e-10 72.0 320 25.3
Atru.chr8.2191 Acer truncatum HOM05D008437 ORTHO05D010577 1.8e-10 71.6 221 28.5
Atru.chr8.2149 Acer truncatum HOM05D008437 ORTHO05D010577 2.4e-10 71.2 221 28.5
Atru.chr8.2185 Acer truncatum HOM05D008437 ORTHO05D010577 2.4e-10 71.2 215 28.4
Migut.A00615 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.2e-10 70.9 283 24.0
Nn8g40182 Nelumbo nucifera HOM05D008437 ORTHO05D008819 3.2e-10 70.9 300 24.7
CSS0013132 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 4.1e-10 70.5 302 26.2
Actinidia22323 Actinidia chinensis HOM05D007726 ORTHO05D008819 5.4e-10 70.1 292 24.7
Lj7C388T5 Lonicera japonica HOM05D007726 ORTHO05D008819 9.2e-10 69.3 211 28.0
Lalb_Chr20g0119831 Lupinus albus HOM05D000007 ORTHO05D000039 9.2e-10 69.3 218 24.8
Thecc.05G022700 Theobroma cacao HOM05D008437 ORTHO05D010577 1.2e-09 68.9 225 25.3
COL.COLO4_27629 Corchorus olitorius HOM05D008437 ORTHO05D010577 1.6e-09 68.6 212 25.5
Migut.A00084 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.6e-09 68.6 302 25.5
SalBow1G0552 Salvia bowleyana HOM05D006664 ORTHO05D009007 2.0e-09 68.2 299 23.1
Aqoxy1G01388 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 2.7e-09 67.8 189 25.9
Nn1g09856 Nelumbo nucifera HOM05D006664 ORTHO05D009007 2.7e-09 67.8 174 30.5
Aqoxy5G04106 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 4.6e-09 67.0 225 27.1
ECA238G0023 Erigeron canadensis HOM05D012740 ORTHO05D010577 5.9e-09 66.6 346 25.4
COL.COLO4_14611 Corchorus olitorius HOM05D008437 ORTHO05D010577 1.0e-08 65.9 235 27.2
Haze_21347 Corylus avellana HOM05D007726 ORTHO05D008819 1.3e-08 65.5 230 26.1
Migut.E01469 Erythranthe guttata HOM05D006664 ORTHO05D009007 1.3e-08 65.5 215 22.8
Haze_21353 Corylus avellana HOM05D007726 ORTHO05D008819 1.7e-08 65.1 231 25.1
Hma1.2p1_0026F.1_g016960 Hydrangea macrophylla HOM05D012740 ORTHO05D010577 1.7e-08 65.1 295 23.7
Medtr8g027595 Medicago truncatula HOM05D008547 ORTHO05D010515 1.7e-08 65.1 226 25.7
CiPaw.07G234400 Carya illinoinensis HOM05D007726 ORTHO05D008819 2.3e-08 64.7 254 25.2
Migut.H00393 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.0e-08 64.3 308 24.0
Actinidia34726 Actinidia chinensis HOM05D007726 ORTHO05D008819 3.9e-08 63.9 220 26.8
Cpa.g.sc30.96 Carica papaya HOM05D007726 ORTHO05D008819 3.9e-08 63.9 222 27.9
Cfa012989 Carpinus fangiana HOM05D007726 ORTHO05D008819 5.0e-08 63.5 231 25.1
COL.COLO4_32922 Corchorus olitorius HOM05D007560 ORTHO05D005947 5.0e-08 63.5 211 26.5
Lj2P257T24 Lonicera japonica HOM05D006664 ORTHO05D009007 6.6e-08 63.2 60 48.3
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 6.6e-08 63.2 215 25.6
PSO013G0363 Papaver somniferum HOM05D000007 ORTHO05D000676 8.6e-08 62.8 263 27.8
Aqoxy4G00159 Aquilegia oxysepala HOM05D017325 ORTHO05D008819 1.1e-07 62.4 215 27.0
AUR62032924 Chenopodium quinoa HOM05D003636 ORTHO05D013299 1.1e-07 62.4 226 25.7
Haze_06983 Corylus avellana HOM05D000007 ORTHO05D000017 1.1e-07 62.4 240 26.2
Dinv27418 Davidia involucrata HOM05D000171 ORTHO05D000101 1.1e-07 62.4 244 25.4
PSO421G0125 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 62.0 191 30.9
PSO421G0291 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 62.0 191 30.9
PSO421G0648 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-07 62.0 191 30.9
Cc10_g11210 Coffea canephora HOM05D007726 ORTHO05D008819 1.9e-07 61.6 243 25.9
Lj7A388T90 Lonicera japonica HOM05D007726 ORTHO05D008819 1.9e-07 61.6 247 26.7
PSO478G1029 Papaver somniferum HOM05D000007 ORTHO05D000676 1.9e-07 61.6 231 26.4
TAR624G0230 Trochodendron aralioides HOM05D000007 ORTHO05D000676 1.9e-07 61.6 186 28.5
CSS0046565 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.5e-07 61.2 195 29.7
Duzib041G0312 Durio zibethinus HOM05D000007 ORTHO05D000017 2.5e-07 61.2 222 27.9
CSS0041692 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 3.3e-07 60.8 203 27.1
CSS0044196 Camellia sinensis var. sinensis HOM05D007726 ORTHO05D008819 3.3e-07 60.8 203 27.1
Migut.E01487 Erythranthe guttata HOM05D006664 ORTHO05D009007 3.3e-07 60.8 93 31.2
PSO384G1360 Papaver somniferum HOM05D000007 ORTHO05D000017 3.3e-07 60.8 211 27.5
PSO384G2323 Papaver somniferum HOM05D000007 ORTHO05D000017 3.3e-07 60.8 211 27.5
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.3e-07 60.8 172 29.7
vmacro17342 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 3.3e-07 60.8 193 29.0
Medtr5g090860 Medicago truncatula HOM05D008547 ORTHO05D010515 4.3e-07 60.5 274 24.8
PSO421G0233 Papaver somniferum HOM05D000007 ORTHO05D000676 4.3e-07 60.5 201 26.9
Psat4g161480 Pisum sativum HOM05D008547 ORTHO05D010515 4.3e-07 60.5 250 24.0
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.6e-07 60.1 191 28.8
Solyc09g012020.1 Solanum lycopersicum HOM05D008437 ORTHO05D010577 5.6e-07 60.1 163 30.7
Aqoxy3G01652 Aquilegia oxysepala HOM05D006664 ORTHO05D008819 7.3e-07 59.7 221 24.9
Nn1g09439 Nelumbo nucifera HOM05D006664 ORTHO05D008819 7.3e-07 59.7 97 32.0
Nitab4.5_0004827g0010 Nicotiana tabacum HOM05D008437 ORTHO05D010577 7.3e-07 59.7 215 23.7
PSO421G0179 Papaver somniferum HOM05D000007 ORTHO05D000676 7.3e-07 59.7 191 30.4
RcHm_v2.0_Chr7g0231221 Rosa chinensis HOM05D007726 ORTHO05D008819 7.3e-07 59.7 240 25.4
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.3e-07 59.7 227 22.9
CSS0002013 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 9.5e-07 59.3 211 29.4
ECA234G1595 Erigeron canadensis HOM05D007726 ORTHO05D008819 9.5e-07 59.3 221 24.4
CAN.G108.40 Capsicum annuum HOM05D000007 ORTHO05D000017 1.6e-06 58.5 210 27.6
Lsat_1_v5_gn_7_61961 Lactuca sativa HOM05D012740 ORTHO05D010577 1.6e-06 58.5 239 24.7
Sopen09g006840 Solanum pennellii HOM05D008437 ORTHO05D010577 1.6e-06 58.5 160 31.2
DCAR_028831 Daucus carota HOM05D008437 ORTHO05D010577 2.1e-06 58.2 217 27.2
Dinv34429 Davidia involucrata HOM05D003187 ORTHO05D003630 2.1e-06 58.2 132 33.3
Manes.18G107700 Manihot esculenta HOM05D007726 ORTHO05D008819 2.1e-06 58.2 147 27.2
FvH4_5g31300 Fragaria vesca HOM05D007726 ORTHO05D008819 2.8e-06 57.8 240 24.6
Nitab4.5_0002794g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-06 57.8 163 33.7
PSO421G0135 Papaver somniferum HOM05D000007 ORTHO05D000676 2.8e-06 57.8 201 26.9
TAR623G1201 Trochodendron aralioides HOM05D000007 ORTHO05D012655 3.6e-06 57.4 221 24.4
Dinv38272 Davidia involucrata HOM05D000007 ORTHO05D010342 4.7e-06 57.0 156 26.9
PSO421G0110 Papaver somniferum HOM05D000007 ORTHO05D000676 4.7e-06 57.0 201 26.9
PSO421G0361 Papaver somniferum HOM05D000007 ORTHO05D000676 4.7e-06 57.0 201 26.9
PSO421G0624 Papaver somniferum HOM05D000007 ORTHO05D000676 4.7e-06 57.0 201 26.9
TAR185G0002 Trochodendron aralioides HOM05D008437 ORTHO05D008819 4.7e-06 57.0 56 48.2
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 6.2e-06 56.6 190 26.3
Thhalv10026790m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 8.0e-06 56.2 211 27.0


User provided reference genes

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