Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 0.0e+00 1576.6 860 100.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 2.1e-267 926.0 938 59.1
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 2.9e-261 905.6 976 57.1
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 1.5e-257 893.3 981 57.5
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 7.5e-257 891.0 971 56.2
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 7.0e-255 884.4 933 58.0
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.4e-250 870.2 971 56.3
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 6.8e-250 867.8 967 56.7
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.7e-248 863.2 968 56.7
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 2.0e-246 856.3 955 56.6
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.7e-246 855.9 968 55.6
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 2.9e-245 852.4 976 56.9
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.1e-244 850.5 963 57.0
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 4.0e-242 842.0 981 55.6
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 6.8e-242 841.3 983 54.8
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.7e-240 836.6 972 54.7
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 2.2e-240 836.3 952 54.9
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 4.9e-240 835.1 974 55.6
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 5.9e-238 828.2 946 56.4
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 1.7e-237 826.6 947 56.4
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.8e-237 825.5 1001 53.5
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 3.6e-235 818.9 959 55.3
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 4.7e-235 818.5 983 54.1
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 1.4e-234 817.0 966 54.3
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 1.4e-234 817.0 988 55.5
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 4.0e-234 815.5 966 53.3
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 3.4e-233 812.4 978 56.0
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 3.4e-233 812.4 965 54.5
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 5.7e-233 811.6 976 52.9
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 5.7e-233 811.6 1081 49.7
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 4.9e-232 808.5 959 55.1
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 1.2e-230 803.9 943 55.7
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 3.9e-229 798.9 961 55.3
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 7.3e-228 794.7 982 54.9
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 7.3e-228 794.7 978 53.9
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 2.8e-227 792.7 968 54.6
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 6.2e-227 791.6 967 54.1
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 8.0e-227 791.2 787 61.4
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 4.0e-226 788.9 949 55.1
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 5.2e-226 788.5 952 53.7
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.2e-225 787.3 916 56.3
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.6e-225 786.2 850 58.5
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 4.1e-223 778.9 958 51.3
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 7.0e-223 778.1 981 53.0
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 1.0e-221 774.2 977 53.1
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 3.0e-221 772.7 990 52.8
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 3.9e-221 772.3 1039 52.1
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.2e-219 767.3 1000 50.4
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 1.5e-217 760.4 939 53.9
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.3e-213 747.3 988 52.3
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.9e-212 743.4 1000 49.6
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 2.0e-209 733.4 948 51.2
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 5.8e-209 731.9 969 50.4
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.4e-207 726.5 967 50.3
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 4.1e-207 725.7 960 50.9
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 9.2e-207 724.5 967 50.2
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 6.0e-206 721.8 970 49.8
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 6.0e-206 721.8 991 49.8
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 6.0e-206 721.8 959 51.6
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 7.8e-206 721.5 962 51.1
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 3.3e-204 716.1 956 50.1
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 2.0e-201 706.8 961 49.6
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 2.6e-201 706.4 962 48.1
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 3.4e-201 706.1 961 51.6
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.4e-201 706.1 985 49.9
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 2.1e-198 696.8 998 49.2
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 3.5e-198 696.0 983 46.3
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 1.7e-197 693.7 956 49.3
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 3.0e-197 693.0 957 49.5
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 3.9e-197 692.6 959 49.3
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 8.7e-197 691.4 993 49.6
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.5e-196 690.6 971 47.3
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 2.5e-196 689.9 955 48.2
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 3.3e-196 689.5 975 49.3
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 7.3e-196 688.3 956 48.8
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 1.6e-195 687.2 967 48.5
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.1e-194 684.5 972 46.1
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 6.9e-194 681.8 937 49.9
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 9.0e-194 681.4 945 48.3
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 9.0e-194 681.4 997 46.0
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 1.7e-192 677.2 961 49.1
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 2.2e-192 676.8 974 48.7
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 4.9e-192 675.6 976 46.2
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.1e-191 674.5 972 47.7
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 2.4e-191 673.3 959 48.7
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 3.5e-190 669.5 977 48.1
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 7.9e-190 668.3 944 46.4
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 1.8e-186 657.1 997 45.6
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 9.3e-183 644.8 936 47.3
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 1.4e-178 630.9 871 49.7
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 9.0e-178 628.2 775 52.0
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 2.5e-175 620.2 955 44.9
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 6.7e-173 612.1 976 44.2
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 3.4e-161 573.2 943 44.1
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 9.1e-146 521.9 632 56.2
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.2e-145 521.5 977 40.2
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 3.8e-144 516.5 519 62.4
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 4.4e-140 503.1 692 50.3
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 4.1e-138 496.5 979 38.8
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 4.5e-137 493.0 974 39.5
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 8.5e-136 488.8 593 53.6
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 1.4e-114 418.3 446 53.1
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.7e-104 384.8 488 53.7
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.1e-101 375.6 572 45.6
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 2.6e-100 370.9 397 55.2
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 5.8e-92 343.2 919 35.3
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 1.8e-77 295.0 340 55.9
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 9.0e-77 292.7 344 56.4
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 3.4e-76 290.8 325 57.2
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.9e-67 261.2 402 48.5
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 9.3e-66 256.1 608 36.0
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.7e-62 244.2 268 54.5
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.0e-59 236.1 334 51.8
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 6.5e-59 233.4 280 56.1
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 1.3e-51 209.1 969 27.0
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 1.0e-43 183.0 414 37.7
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.7e-43 182.2 267 45.3
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 2.6e-36 158.3 333 39.0
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 6.1e-33 147.1 812 24.0
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 1.7e-30 139.0 265 42.3
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 4.8e-30 137.5 103 65.0
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 6.3e-30 137.1 115 64.3
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.2e-28 132.9 332 36.7
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 5.9e-28 130.6 113 62.8
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 1.3e-27 129.4 164 50.0
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 2.2e-27 128.6 262 35.9
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 8.5e-27 126.7 119 60.5
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 3.2e-26 124.8 179 46.4
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-25 122.9 263 33.8
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.7e-25 121.7 143 48.3
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 3.6e-25 121.3 144 47.9
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 6.1e-25 120.6 143 52.4
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 5.2e-24 117.5 699 24.9
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 2.6e-23 115.2 90 66.7
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 2.2e-22 112.1 90 65.6
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 5.3e-21 107.5 730 25.1
Dinv34035 Davidia involucrata HOM05D004844 ORTHO05D006036 3.0e-16 91.7 156 42.9
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 6.8e-16 90.5 72 70.8
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.4e-15 87.8 56 82.1
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 4.4e-15 87.8 67 71.6
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.1e-13 83.2 53 75.5
Actinidia04726 Actinidia chinensis HOM05D004844 ORTHO05D006036 5.4e-13 80.9 44 86.4
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.6e-12 79.3 91 54.9
AagrBONN_evm.TU.Sc2ySwM_228.4285 Anthoceros agrestis HOM05D004844 ORTHO05D074214 5.9e-12 77.4 167 35.9
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.3e-11 75.5 78 59.0
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.9e-11 75.1 99 48.5
ATR0735G001 Amborella trichopoda HOM05D004844 ORTHO05D006036 9.5e-10 70.1 77 51.9
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 2.8e-09 68.6 49 69.4
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 1.4e-08 66.2 57 61.4


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