Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A750T89 Lonicera japonica HOM05D004215 ORTHO05D005293 2.4e-75 285.4 142 100.0
GSVIVG01011796001 Vitis vinifera HOM05D004215 ORTHO05D005293 3.5e-63 245.0 142 82.4
CSS0000916 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 4.6e-63 244.6 142 82.4
Dinv16170 Davidia involucrata HOM05D004215 ORTHO05D005293 4.6e-63 244.6 142 83.8
HanXRQChr15g0466211 Helianthus annuus HOM05D004215 ORTHO05D005293 7.9e-63 243.8 142 83.1
ECA233G2791 Erigeron canadensis HOM05D004215 ORTHO05D005293 1.3e-62 243.0 142 82.4
Eucgr.B02879 Eucalyptus grandis HOM05D004215 ORTHO05D005293 3.9e-62 241.5 142 80.3
Lsat_1_v5_gn_8_41661 Lactuca sativa HOM05D004215 ORTHO05D005293 5.1e-62 241.1 142 82.4
Peaxi162Scf00205g00925 Petunia axillaris HOM05D004215 ORTHO05D005293 5.1e-62 241.1 142 82.4
DCAR_023619 Daucus carota HOM05D004215 ORTHO05D005293 6.7e-62 240.7 142 80.3
Nitab4.5_0000293g0040 Nicotiana tabacum HOM05D004215 ORTHO05D005293 8.7e-62 240.4 142 81.7
Actinidia36693 Actinidia chinensis HOM05D004215 ORTHO05D005293 3.3e-61 238.4 142 81.0
MELO3C012293.2 Cucumis melo HOM05D004215 ORTHO05D005293 3.3e-61 238.4 142 78.9
Lj3A876G45 Lonicera japonica HOM05D004215 ORTHO05D005293 3.3e-61 238.4 142 80.3
Cfa015796 Carpinus fangiana HOM05D004215 ORTHO05D005293 4.3e-61 238.0 142 80.3
CiPaw.06G014700 Carya illinoinensis HOM05D004215 ORTHO05D005293 5.7e-61 237.7 142 80.3
Cc11_g09170 Coffea canephora HOM05D004215 ORTHO05D005293 5.7e-61 237.7 142 81.0
Sopen05g004280 Solanum pennellii HOM05D004215 ORTHO05D005293 7.4e-61 237.3 142 80.3
Gohir.D05G319000 Gossypium hirsutum HOM05D004215 ORTHO05D005293 9.7e-61 236.9 142 78.2
Gorai.009G341900 Gossypium raimondii HOM05D004215 ORTHO05D005293 9.7e-61 236.9 142 78.2
Rhsim09G0069000 Rhododendron simsii HOM05D004215 ORTHO05D005293 1.3e-60 236.5 142 80.3
Solyc05g008450.3 Solanum lycopersicum HOM05D004215 ORTHO05D005293 1.6e-60 236.1 142 79.6
CSS0048780 Camellia sinensis var. sinensis HOM05D004215 ORTHO05D005293 2.1e-60 235.7 142 79.6
CsaV3_5G034820 Cucumis sativus L. HOM05D004215 ORTHO05D005293 2.8e-60 235.3 142 77.5
ClCG05G022300 Citrullus lanatus HOM05D004215 ORTHO05D005293 3.7e-60 235.0 142 77.5
Potri.008G126700 Populus trichocarpa HOM05D004215 ORTHO05D005293 3.7e-60 235.0 142 78.2
Sc14g0007220 Simmondsia chinensis HOM05D004215 ORTHO05D005293 3.7e-60 235.0 142 79.6
PGSC0003DMG400030559 Solanum tuberosum HOM05D004215 ORTHO05D005293 3.7e-60 235.0 142 80.3
MSTRG.13568 Avicennia marina HOM05D004215 ORTHO05D005293 6.3e-60 234.2 142 78.2
Actinidia31987 Actinidia chinensis HOM05D004215 ORTHO05D005293 1.1e-59 233.4 142 78.2
Manes.14G110200 Manihot esculenta HOM05D004215 ORTHO05D005293 1.4e-59 233.0 142 80.3
Prupe.1G320800 Prunus persica HOM05D004215 ORTHO05D005293 1.4e-59 233.0 142 78.2
Duzib251G0621 Durio zibethinus HOM05D004215 ORTHO05D005293 4.1e-59 231.5 142 76.1
Migut.L00828 Erythranthe guttata HOM05D004215 ORTHO05D005293 4.1e-59 231.5 142 76.1
Thecc.02G217400 Theobroma cacao HOM05D004215 ORTHO05D005293 6.9e-59 230.7 142 77.5
CAN.G1489.9 Capsicum annuum HOM05D004215 ORTHO05D005293 9.0e-59 230.3 142 78.2
Ciclev10016124m.g Citrus clementina HOM05D004215 ORTHO05D005293 9.0e-59 230.3 142 75.4
Cpa.g.sc65.98 Carica papaya HOM05D004215 ORTHO05D005293 1.5e-58 229.6 142 78.2
TWI79G1401 Tripterygium wilfordii HOM05D004215 ORTHO05D005293 1.5e-58 229.6 142 78.9
COL.COLO4_15325 Corchorus olitorius HOM05D004215 ORTHO05D005293 2.6e-58 228.8 142 76.1
Potri.010G116500 Populus trichocarpa HOM05D004215 ORTHO05D005293 2.6e-58 228.8 141 77.3
Actinidia14939 Actinidia chinensis HOM05D004215 ORTHO05D005293 3.4e-58 228.4 142 77.5
Migut.E00397 Erythranthe guttata HOM05D004215 ORTHO05D005293 3.4e-58 228.4 142 76.1
Migut.L00651 Erythranthe guttata HOM05D004215 ORTHO05D005293 3.4e-58 228.4 142 74.6
RcHm_v2.0_Chr4g0433881 Rosa chinensis HOM05D004215 ORTHO05D005293 3.4e-58 228.4 142 76.1
Sed0020304 Sechium edule HOM05D004215 ORTHO05D005293 4.5e-58 228.0 142 74.6
Lj5g0023519 Lotus japonicus HOM05D004215 ORTHO05D005293 7.6e-58 227.3 142 76.8
Atru.chr11.354 Acer truncatum HOM05D004215 ORTHO05D005293 1.0e-57 226.9 142 76.8
CARHR015680 Cardamine hirsuta HOM05D004215 ORTHO05D005293 1.3e-57 226.5 142 73.9
Glyma.10G267000 Glycine max HOM05D004215 ORTHO05D005293 1.3e-57 226.5 142 75.4
MD13G1031300 Malus domestica HOM05D004215 ORTHO05D005293 1.3e-57 226.5 142 76.1
Sed0017516 Sechium edule HOM05D004215 ORTHO05D005293 2.2e-57 225.7 157 70.1
Carub.0001s1491 Capsella rubella HOM05D004215 ORTHO05D005293 2.9e-57 225.3 142 72.5
FvH4_4g26280 Fragaria vesca HOM05D004215 ORTHO05D005293 2.9e-57 225.3 142 76.1
FAN12G1757 Fragaria x ananassa HOM05D004215 ORTHO05D005293 2.9e-57 225.3 142 76.1
FAN12G4108 Fragaria x ananassa HOM05D004215 ORTHO05D005293 2.9e-57 225.3 142 76.1
AL1G27210 Arabidopsis lyrata HOM05D004215 ORTHO05D005293 3.8e-57 224.9 142 73.2
THA.LOC104805048 Tarenaya hassleriana HOM05D004215 ORTHO05D005293 3.8e-57 224.9 142 73.9
FAN22G1507 Fragaria x ananassa HOM05D004215 ORTHO05D005293 5.0e-57 224.6 142 75.4
FAN17G1658 Fragaria x ananassa HOM05D004215 ORTHO05D005293 8.5e-57 223.8 142 75.4
Psat6g222520 Pisum sativum HOM05D004215 ORTHO05D005293 1.1e-56 223.4 142 75.4
CiPaw.05G246100 Carya illinoinensis HOM05D004215 ORTHO05D005293 1.9e-56 222.6 142 75.4
CANSAT01G2004 Cannabis sativa HOM05D004215 ORTHO05D005293 2.5e-56 222.2 142 72.5
PSO017G7108 Papaver somniferum HOM05D004215 ORTHO05D005293 2.5e-56 222.2 142 73.9
PSO478G0614 Papaver somniferum HOM05D004215 ORTHO05D005293 2.5e-56 222.2 142 74.6
Phvul.007G035000 Phaseolus vulgaris HOM05D004215 ORTHO05D005293 2.5e-56 222.2 142 73.9
MSTRG.2195 Avicennia marina HOM05D004215 ORTHO05D005293 3.2e-56 221.9 142 75.4
Hund25007 Selenicereus undatus HOM05D004215 ORTHO05D005293 3.2e-56 221.9 142 72.5
TWI31G0297 Tripterygium wilfordii HOM05D004215 ORTHO05D005293 3.2e-56 221.9 142 78.2
MD16G1033500 Malus domestica HOM05D004215 ORTHO05D005293 4.2e-56 221.5 142 75.4
QL01p002798 Quercus lobata HOM05D004215 ORTHO05D005293 4.2e-56 221.5 174 64.4
Sp1g13480 Schrenkiella parvula HOM05D004215 ORTHO05D005293 4.2e-56 221.5 142 71.1
Thhalv10008333m.g Eutrema salsugineum HOM05D004215 ORTHO05D005293 5.5e-56 221.1 142 71.1
AT1G15140 Arabidopsis thaliana HOM05D004215 ORTHO05D005293 7.2e-56 220.7 142 71.1
EL10Ac6g14267 Beta vulgaris HOM05D004215 ORTHO05D005293 7.2e-56 220.7 142 73.2
BcaC05g25445 Brassica carinata HOM05D004215 ORTHO05D005293 7.2e-56 220.7 142 71.1
C05p13270 Brassica napus HOM05D004215 ORTHO05D005293 7.2e-56 220.7 142 71.1
BolC5t30064H Brassica oleracea HOM05D004215 ORTHO05D005293 7.2e-56 220.7 142 71.1
BcaB03g13074 Brassica carinata HOM05D004215 ORTHO05D005293 1.2e-55 219.9 142 69.7
BcaB02g06582 Brassica carinata HOM05D004215 ORTHO05D005293 1.6e-55 219.5 142 70.4
BcaC07g38770 Brassica carinata HOM05D004215 ORTHO05D005293 1.6e-55 219.5 142 69.7
A06p11150 Brassica napus HOM05D004215 ORTHO05D005293 1.6e-55 219.5 143 71.3
C08p17030 Brassica napus HOM05D004215 ORTHO05D005293 1.6e-55 219.5 142 69.7
BraA06t24295Z Brassica rapa HOM05D004215 ORTHO05D005293 1.6e-55 219.5 143 71.3
Glyma.20G123700 Glycine max HOM05D004215 ORTHO05D005293 1.6e-55 219.5 142 73.2
SGA_v2.0_scaffold14G06920 Striga asiatica HOM05D004215 ORTHO05D005293 1.6e-55 219.5 152 71.7
BolC8t49328H Brassica oleracea HOM05D004215 ORTHO05D005293 3.6e-55 218.4 142 69.0
arahy.Tifrunner.gnm1.ann1.BMT3C6 Arachis hypogaea HOM05D004215 ORTHO05D005293 4.6e-55 218.0 142 72.5
arahy.Tifrunner.gnm1.ann1.IPKA5V Arachis hypogaea HOM05D004215 ORTHO05D005293 4.6e-55 218.0 142 72.5
Aa31LG1G20 Aethionema arabicum HOM05D004215 ORTHO05D005293 7.9e-55 217.2 142 71.1
A08p31720 Brassica napus HOM05D004215 ORTHO05D005293 7.9e-55 217.2 142 69.0
BraA08t35094Z Brassica rapa HOM05D004215 ORTHO05D005293 7.9e-55 217.2 142 69.0
Lalb_Chr06g0165701 Lupinus albus HOM05D004215 ORTHO05D005293 7.9e-55 217.2 142 71.1
TAR629G2922 Trochodendron aralioides HOM05D004215 ORTHO05D005293 7.9e-55 217.2 171 65.5
VMungo0720G1296 Vigna mungo HOM05D004215 ORTHO05D005293 7.9e-55 217.2 142 71.8
Lalb_Chr17g0338761 Lupinus albus HOM05D004215 ORTHO05D005293 8.7e-54 213.8 142 71.8
FAN07G0674 Fragaria x ananassa HOM05D004215 ORTHO05D005293 1.9e-53 212.6 164 65.9
unitig_699.g19481 Utricularia gibba HOM05D004215 ORTHO05D005293 4.3e-53 211.5 142 70.4
Nitab4.5_0000350g0220 Nicotiana tabacum HOM05D004215 ORTHO05D005293 7.4e-53 210.7 142 74.6
PGR102G1684 Punica granatum HOM05D004215 ORTHO05D005293 1.3e-52 209.9 128 75.8
SalBow8G1964 Salvia bowleyana HOM05D004215 ORTHO05D005293 2.2e-52 209.1 158 67.7
SEGI_29541 Sequoiadendron giganteum HOM05D004215 ORTHO05D005293 2.2e-52 209.1 142 67.6
Hma1.2p1_0114F.1_g055430 Hydrangea macrophylla HOM05D004215 ORTHO05D005293 2.8e-52 208.8 121 81.0
Aqoxy3G00166 Aquilegia oxysepala HOM05D004215 ORTHO05D005293 6.3e-52 207.6 138 71.0
Haze_00697 Corylus avellana HOM05D004215 ORTHO05D005293 4.1e-51 204.9 154 68.8
Oeu004319.1 Olea europaea HOM05D004215 ORTHO05D005293 5.3e-51 204.5 124 77.4
HPP92_021849 Vanilla planifolia HOM05D004215 ORTHO05D005293 9.1e-51 203.8 142 68.3
PGR119G1032 Punica granatum HOM05D004215 ORTHO05D005293 2.0e-50 202.6 140 66.4
AUR62002761 Chenopodium quinoa HOM05D004215 ORTHO05D005293 3.4e-50 201.8 121 76.9
Sabra10G0086200 Salix brachista HOM05D004215 ORTHO05D005293 1.0e-49 200.3 125 77.6
Sabra10G0087900 Salix brachista HOM05D004215 ORTHO05D005293 1.0e-49 200.3 125 77.6
DCAR_030188 Daucus carota HOM05D004215 ORTHO05D005293 1.3e-49 199.9 142 68.3
AUR62014123 Chenopodium quinoa HOM05D004215 ORTHO05D005293 1.7e-49 199.5 121 76.0
CDE04G0818 Ceratophyllum demersum HOM05D004215 ORTHO05D005293 1.1e-48 196.8 142 64.8
SGA_v2.0_scaffold50G18535 Striga asiatica HOM05D004215 ORTHO05D005293 2.5e-48 195.7 152 64.5
vmacro01429 Vaccinium macrocarpon HOM05D004215 ORTHO05D005293 7.2e-48 194.1 114 82.5
AagrBONN_evm.TU.Sc2ySwM_228.3165 Anthoceros agrestis HOM05D004215 ORTHO05D005293 2.7e-47 192.2 143 65.0
Medtr1g108710 Medicago truncatula HOM05D004215 ORTHO05D005293 2.7e-47 192.2 121 74.4
Pp3c16_22650 Physcomitrium patens HOM05D004215 ORTHO05D005293 3.6e-47 191.8 142 62.7
SMO174G0012 Selaginella moellendorffii HOM05D004215 ORTHO05D005293 6.1e-47 191.0 142 63.4
Os02g0328300 Oryza sativa ssp. japonica HOM05D004215 ORTHO05D005293 1.4e-46 189.9 142 61.3
CDE06G1149 Ceratophyllum demersum HOM05D004215 ORTHO05D005293 1.8e-46 189.5 142 64.1
MBI16_g21171_MAGBIO Magnolia biondii HOM05D004215 ORTHO05D005293 1.5e-45 186.4 151 66.2
ATR0691G234 Amborella trichopoda HOM05D004215 ORTHO05D005293 2.0e-45 186.0 121 71.1
Mapoly0004s0030 Marchantia polymorpha HOM05D004215 ORTHO05D005293 2.0e-45 186.0 142 62.0
TPR.G4918 Trifolium pratense HOM05D004215 ORTHO05D005293 2.0e-45 186.0 114 79.8
Zm00001eb121490 Zea mays HOM05D004215 ORTHO05D005293 1.3e-44 183.3 142 60.6
Os01g0120600 Oryza sativa ssp. japonica HOM05D004215 ORTHO05D005293 1.7e-44 183.0 142 59.9
Nn4g24046 Nelumbo nucifera HOM05D004215 ORTHO05D005293 8.2e-44 180.6 142 65.5
Actinidia16703 Actinidia chinensis HOM05D004215 ORTHO05D005293 5.9e-42 174.5 103 80.6
Actinidia33607 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.5e-40 169.1 137 56.9
SHI16315 Sapria himalayana HOM05D004215 ORTHO05D005293 3.2e-40 168.7 121 66.9
Actinidia33626 Actinidia chinensis HOM05D004215 ORTHO05D005293 8.5e-33 144.1 83 80.7
Actinidia33606 Actinidia chinensis HOM05D004215 ORTHO05D005293 2.7e-31 139.0 126 50.0
Zm00001eb241500 Zea mays HOM05D004215 ORTHO05D005293 6.7e-30 134.4 93 64.5
MBI10_g46302_MAGBIO Magnolia biondii HOM05D004215 ORTHO05D005293 7.7e-26 120.9 84 67.9
RcHm_v2.0_Chr6g0253871 Rosa chinensis HOM05D004215 ORTHO05D005293 7.7e-26 120.9 82 68.3
Cre01.g000350 Chlamydomonas reinhardtii HOM05D004215 ORTHO05D005293 9.4e-24 114.0 146 45.9
Gohir.A05G317200 Gossypium hirsutum HOM05D004215 ORTHO05D005293 8.0e-23 110.9 62 82.3
Actinidia24608 Actinidia chinensis HOM05D004215 ORTHO05D005293 5.2e-22 108.2 60 81.7
Actinidia15237 Actinidia chinensis HOM05D004215 ORTHO05D005293 1.5e-21 106.7 62 77.4
Ca_23697_v3 Cicer arietinum L. HOM05D004215 ORTHO05D005293 2.2e-20 102.8 62 75.8
MCO13G089 Micromonas commoda HOM05D004215 ORTHO05D005293 6.3e-20 101.3 142 43.7
CBR_g23714 Chara braunii HOM05D004215 ORTHO05D005293 3.1e-19 99.0 111 48.6
RcHm_v2.0_Chr2g0123901 Rosa chinensis HOM05D004215 ORTHO05D005293 5.9e-18 94.7 65 69.2
RcHm_v2.0_Chr6g0284911 Rosa chinensis HOM05D004215 ORTHO05D005293 5.9e-18 94.7 62 71.0
TPR.G10991 Trifolium pratense HOM05D004215 ORTHO05D005293 4.7e-15 85.1 50 80.0
Pp3c20_8810 Physcomitrium patens HOM05D004215 ORTHO05D018306 1.3e-12 77.0 142 29.6
SMO201G0141 Selaginella moellendorffii HOM05D028400 ORTHO05D005293 1.3e-12 77.0 144 34.7
AagrBONN_evm.TU.Sc2ySwM_228.585 Anthoceros agrestis HOM05D004215 ORTHO05D018306 3.1e-11 72.4 141 27.7
PRCOL_00001993 Prasinoderma coloniale HOM05D004215 ORTHO05D005293 3.1e-11 72.4 156 32.7


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