Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A74T33 Lonicera japonica HOM05D000983 ORTHO05D006794 7.9e-152 540.4 275 100.0
Lj6A793T95 Lonicera japonica HOM05D000983 ORTHO05D006794 3.2e-113 412.1 322 70.8
CSS0016919 Camellia sinensis var. sinensis HOM05D000983 ORTHO05D006794 4.7e-72 275.4 321 49.2
CSS0035472 Camellia sinensis var. sinensis HOM05D000983 ORTHO05D006794 1.4e-71 273.9 325 48.6
vmacro16327 Vaccinium macrocarpon HOM05D000983 ORTHO05D006794 1.8e-71 273.5 325 47.7
TWI36G1755 Tripterygium wilfordii HOM05D000983 ORTHO05D006794 3.8e-69 265.8 315 49.2
Cc11_g13430 Coffea canephora HOM05D000983 ORTHO05D006794 4.9e-69 265.4 324 47.5
GSVIVG01020069001 Vitis vinifera HOM05D000983 ORTHO05D006794 4.9e-69 265.4 319 49.2
Actinidia04020 Actinidia chinensis HOM05D000983 ORTHO05D006794 8.4e-69 264.6 325 46.8
Lj3A1042T89 Lonicera japonica HOM05D000983 ORTHO05D006794 1.9e-68 263.5 338 47.3
DCAR_027388 Daucus carota HOM05D000983 ORTHO05D006794 2.4e-68 263.1 323 48.3
Oeu040122.2 Olea europaea HOM05D000983 ORTHO05D006794 2.4e-68 263.1 330 47.9
MD13G1078600 Malus domestica HOM05D000983 ORTHO05D006794 3.2e-68 262.7 324 47.5
Ciclev10030661m.g Citrus clementina HOM05D000983 ORTHO05D006794 1.6e-67 260.4 323 47.7
MD16G1078200 Malus domestica HOM05D000983 ORTHO05D006794 1.0e-66 257.7 326 45.1
FAN22G1876 Fragaria x ananassa HOM05D000983 ORTHO05D006794 3.0e-66 256.1 328 47.6
Rhsim12G0130100 Rhododendron simsii HOM05D000983 ORTHO05D006794 3.9e-66 255.8 330 45.5
Prupe.1G268300 Prunus persica HOM05D000983 ORTHO05D006794 5.1e-66 255.4 327 47.1
Sed0014431 Sechium edule HOM05D000983 ORTHO05D006794 5.1e-66 255.4 327 45.9
MSTRG.674 Avicennia marina HOM05D000983 ORTHO05D006794 8.7e-66 254.6 326 45.7
QL03p065556 Quercus lobata HOM05D000983 ORTHO05D006794 8.7e-66 254.6 331 46.5
Dinv24958 Davidia involucrata HOM05D000983 ORTHO05D006794 4.3e-65 252.3 340 45.9
Nitab4.5_0010498g0010 Nicotiana tabacum HOM05D000983 ORTHO05D006794 4.3e-65 252.3 328 45.4
FAN07G2190 Fragaria x ananassa HOM05D000983 ORTHO05D006794 5.6e-65 251.9 326 47.2
Atru.chr11.1844 Acer truncatum HOM05D000983 ORTHO05D006794 9.6e-65 251.1 324 45.1
MELO3C012071.2 Cucumis melo HOM05D000983 ORTHO05D006794 9.6e-65 251.1 330 45.5
Manes.05G097100 Manihot esculenta HOM05D000983 ORTHO05D006794 9.6e-65 251.1 327 45.3
MSTRG.7822 Avicennia marina HOM05D000983 ORTHO05D006794 2.8e-64 249.6 330 45.2
ClCG05G024550 Citrullus lanatus HOM05D000983 ORTHO05D006794 2.8e-64 249.6 328 45.1
Cfa009027 Carpinus fangiana HOM05D000983 ORTHO05D006794 4.8e-64 248.8 327 45.3
Peaxi162Scf00209g00331 Petunia axillaris HOM05D000983 ORTHO05D006794 1.4e-63 247.3 330 45.2
Sc04g0008440 Simmondsia chinensis HOM05D000983 ORTHO05D006794 1.4e-63 247.3 339 46.0
FvH4_4g31910 Fragaria vesca HOM05D000983 ORTHO05D006794 2.4e-63 246.5 327 46.5
Nitab4.5_0000879g0090 Nicotiana tabacum HOM05D000983 ORTHO05D006794 3.1e-63 246.1 328 44.8
Potri.010G092900 Populus trichocarpa HOM05D000983 ORTHO05D006794 3.1e-63 246.1 327 44.3
Sabra10G0065700 Salix brachista HOM05D000983 ORTHO05D006794 3.1e-63 246.1 327 43.1
Cfa009029 Carpinus fangiana HOM05D000983 ORTHO05D006794 4.0e-63 245.7 327 44.3
Haze_12057 Corylus avellana HOM05D000983 ORTHO05D006794 5.3e-63 245.4 335 44.2
Cfa009028 Carpinus fangiana HOM05D000983 ORTHO05D006794 6.9e-63 245.0 328 44.5
RcHm_v2.0_Chr4g0440561 Rosa chinensis HOM05D000983 ORTHO05D006794 6.9e-63 245.0 326 46.0
CAN.G279.13 Capsicum annuum HOM05D000983 ORTHO05D006794 9.0e-63 244.6 328 44.8
Migut.E00112 Erythranthe guttata HOM05D000983 ORTHO05D006794 1.2e-62 244.2 310 46.5
CsaV3_5G032400 Cucumis sativus L. HOM05D000983 ORTHO05D006794 1.5e-62 243.8 328 43.6
Nn4g23056 Nelumbo nucifera HOM05D000983 ORTHO05D006794 1.5e-62 243.8 334 44.9
Glyma.08G296800 Glycine max HOM05D000983 ORTHO05D006794 2.6e-62 243.0 328 43.6
TWI75G1868 Tripterygium wilfordii HOM05D000983 ORTHO05D006794 2.6e-62 243.0 328 45.7
FAN12G0310 Fragaria x ananassa HOM05D000983 ORTHO05D006794 4.4e-62 242.3 329 46.2
Manes.01G189800 Manihot esculenta HOM05D000983 ORTHO05D006794 4.4e-62 242.3 329 44.1
Duzib251G0295 Durio zibethinus HOM05D000983 ORTHO05D006794 5.8e-62 241.9 326 45.4
arahy.Tifrunner.gnm1.ann1.FS95PS Arachis hypogaea HOM05D000983 ORTHO05D006794 1.3e-61 240.7 326 43.3
COL.COLO4_07928 Corchorus olitorius HOM05D000983 ORTHO05D006794 4.9e-61 238.8 326 42.0
Solyc05g007070.2 Solanum lycopersicum HOM05D000983 ORTHO05D006794 1.1e-60 237.7 329 43.5
Sopen05g003040 Solanum pennellii HOM05D000983 ORTHO05D006794 1.1e-60 237.7 329 43.2
Eucgr.G02543 Eucalyptus grandis HOM05D000983 ORTHO05D006794 2.4e-60 236.5 331 44.7
Duzib268G0604 Durio zibethinus HOM05D000983 ORTHO05D006794 3.2e-60 236.1 326 44.5
CiPaw.06G081000 Carya illinoinensis HOM05D000983 ORTHO05D006794 4.2e-60 235.7 327 43.7
PGR119G1594 Punica granatum HOM05D000983 ORTHO05D006794 4.2e-60 235.7 328 41.8
arahy.Tifrunner.gnm1.ann1.T04E6T Arachis hypogaea HOM05D000983 ORTHO05D006794 7.1e-60 235.0 328 43.0
Lj4g0022586 Lotus japonicus HOM05D000983 ORTHO05D006794 7.1e-60 235.0 326 42.3
TAR629G2838 Trochodendron aralioides HOM05D000983 ORTHO05D006794 9.3e-60 234.6 356 41.9
CiPaw.05G139400 Carya illinoinensis HOM05D000983 ORTHO05D006794 1.2e-59 234.2 358 40.5
Duzib248G1546 Durio zibethinus HOM05D000983 ORTHO05D006794 1.2e-59 234.2 322 44.1
CANSAT64G0240 Cannabis sativa HOM05D000983 ORTHO05D006794 1.6e-59 233.8 325 45.2
SalBow2G3062 Salvia bowleyana HOM05D000983 ORTHO05D006794 3.5e-59 232.6 332 43.4
SGA_v2.0_scaffold302G47859 Striga asiatica HOM05D000983 ORTHO05D006794 3.5e-59 232.6 330 43.6
Nn3g17137 Nelumbo nucifera HOM05D000983 ORTHO05D006794 1.3e-58 230.7 351 40.5
EL10Ac6g13156 Beta vulgaris HOM05D000983 ORTHO05D006794 1.7e-58 230.3 331 42.9
C06p43620 Brassica napus HOM05D000983 ORTHO05D006794 5.1e-58 228.8 310 43.9
BolC6t39434H Brassica oleracea HOM05D000983 ORTHO05D006794 5.1e-58 228.8 310 43.9
BcaC08g46429 Brassica carinata HOM05D000983 ORTHO05D006794 8.7e-58 228.0 311 43.7
Thecc.02G354600 Theobroma cacao HOM05D000983 ORTHO05D006794 1.1e-57 227.6 326 42.3
ECA246G2169 Erigeron canadensis HOM05D000983 ORTHO05D006794 1.9e-57 226.9 324 43.2
CARHR062910 Cardamine hirsuta HOM05D000983 ORTHO05D006794 3.3e-57 226.1 322 42.9
Gohir.A12G166500 Gossypium hirsutum HOM05D000983 ORTHO05D006794 4.3e-57 225.7 326 42.6
Gohir.D12G170000 Gossypium hirsutum HOM05D000983 ORTHO05D006794 7.3e-57 224.9 326 42.9
Phvul.003G069200 Phaseolus vulgaris HOM05D000983 ORTHO05D006794 9.6e-57 224.6 330 41.5
PSO478G1338 Papaver somniferum HOM05D000983 ORTHO05D006794 1.3e-56 224.2 314 43.3
Hund05909 Selenicereus undatus HOM05D000983 ORTHO05D006794 1.6e-56 223.8 337 40.7
THA.LOC104822100 Tarenaya hassleriana HOM05D000983 ORTHO05D006794 2.1e-56 223.4 324 42.0
BcaB03g14761 Brassica carinata HOM05D000983 ORTHO05D006794 2.8e-56 223.0 320 42.5
Gorai.008G182600 Gossypium raimondii HOM05D000983 ORTHO05D006794 2.8e-56 223.0 326 42.6
A07p36260 Brassica napus HOM05D000983 ORTHO05D006794 3.6e-56 222.6 320 42.8
PSO017G0411 Papaver somniferum HOM05D000983 ORTHO05D006794 3.6e-56 222.6 313 43.5
Lj2g0003595 Lotus japonicus HOM05D000983 ORTHO05D006794 1.4e-55 220.7 325 41.5
Thhalv10018099m.g Eutrema salsugineum HOM05D000983 ORTHO05D006794 1.8e-55 220.3 318 41.8
BraA07t31198Z Brassica rapa HOM05D000983 ORTHO05D006794 9.0e-55 218.0 320 41.9
HanXRQChr07g0191921 Helianthus annuus HOM05D000983 ORTHO05D006794 9.0e-55 218.0 306 41.8
AT1G69830 Arabidopsis thaliana HOM05D000983 ORTHO05D006794 1.5e-54 217.2 311 41.8
Lalb_Chr10g0097991 Lupinus albus HOM05D000983 ORTHO05D006794 4.5e-54 215.7 329 40.7
Sp5g24940 Schrenkiella parvula HOM05D000983 ORTHO05D006794 5.8e-54 215.3 320 41.9
Carub.0002s1652 Capsella rubella HOM05D000983 ORTHO05D006794 1.7e-53 213.8 318 40.3
Psat4g132240 Pisum sativum HOM05D000983 ORTHO05D006794 4.9e-53 212.2 327 39.4
Aa31LG6G4350 Aethionema arabicum HOM05D000983 ORTHO05D006794 6.4e-53 211.8 320 40.6
AL2G29120 Arabidopsis lyrata HOM05D000983 ORTHO05D006794 8.4e-53 211.5 321 40.2
AUR62005729 Chenopodium quinoa HOM05D000983 ORTHO05D006794 1.1e-52 211.1 336 39.9
Lalb_Chr05g0230241 Lupinus albus HOM05D000983 ORTHO05D006794 4.2e-52 209.1 257 44.7
VMungo0251G1110 Vigna mungo HOM05D000983 ORTHO05D006794 5.5e-52 208.8 330 40.0
Lsat_1_v5_gn_3_51421 Lactuca sativa HOM05D000983 ORTHO05D006794 9.3e-52 208.0 316 41.5
unitig_26.g10315 Utricularia gibba HOM05D000983 ORTHO05D006794 7.9e-51 204.9 302 41.4
TPR.G33281 Trifolium pratense HOM05D000983 ORTHO05D006794 1.3e-50 204.1 326 38.7
PSO591G0257 Papaver somniferum HOM05D000983 ORTHO05D006794 3.0e-50 203.0 332 39.2
Ca_22859_v3 Cicer arietinum L. HOM05D000983 ORTHO05D006794 8.7e-50 201.4 258 44.2
Medtr8g468990 Medicago truncatula HOM05D000983 ORTHO05D006794 8.7e-50 201.4 325 38.5
Gohir.D02G114700 Gossypium hirsutum HOM05D000983 ORTHO05D006794 4.3e-49 199.1 313 39.3
TAR371G0512 Trochodendron aralioides HOM05D000983 ORTHO05D006794 5.6e-49 198.7 343 37.6
PSO832G2404 Papaver somniferum HOM05D000983 ORTHO05D006794 1.6e-48 197.2 343 37.9
Gorai.005G139200 Gossypium raimondii HOM05D000983 ORTHO05D006794 3.7e-48 196.1 313 39.0
Ca_04744_v3 Cicer arietinum L. HOM05D000983 ORTHO05D006794 8.1e-48 194.9 338 37.0
arahy.Tifrunner.gnm1.ann1.X74CZZ Arachis hypogaea HOM05D000983 ORTHO05D006794 1.8e-47 193.7 320 38.8
CDE04G0949 Ceratophyllum demersum HOM05D000983 ORTHO05D006794 4.0e-47 192.6 323 36.8
VMungo1215G1269 Vigna mungo HOM05D000983 ORTHO05D006794 2.0e-46 190.3 323 36.5
ATR1120G063 Amborella trichopoda HOM05D000983 ORTHO05D006794 3.4e-46 189.5 353 36.8
Aqoxy3G03277 Aquilegia oxysepala HOM05D000983 ORTHO05D006794 5.8e-46 188.7 327 36.1
Hund25267 Selenicereus undatus HOM05D000983 ORTHO05D006794 1.7e-45 187.2 324 38.0
AUR62028831 Chenopodium quinoa HOM05D000983 ORTHO05D006794 2.2e-45 186.8 336 36.6
CDE06G2429 Ceratophyllum demersum HOM05D000983 ORTHO05D006794 4.9e-45 185.7 350 35.1
Phvul.002G065700 Phaseolus vulgaris HOM05D000983 ORTHO05D006794 6.5e-45 185.3 325 34.8
arahy.Tifrunner.gnm1.ann1.DYUN2H Arachis hypogaea HOM05D000983 ORTHO05D006794 1.1e-44 184.5 323 37.5
CDE07G0280 Ceratophyllum demersum HOM05D000983 ORTHO05D006794 3.2e-44 183.0 350 34.0
Lsat_1_v5_gn_8_54140 Lactuca sativa HOM05D000983 ORTHO05D006794 7.1e-44 181.8 313 38.0
Ah.02g131280 Amaranthus hybridus HOM05D000983 ORTHO05D006794 2.7e-43 179.9 335 37.9
Glyma.02G020500 Glycine max HOM05D000983 ORTHO05D006794 3.0e-42 176.4 324 36.1
CDE06G2643 Ceratophyllum demersum HOM05D000983 ORTHO05D006794 8.7e-42 174.9 243 42.0
Actinidia31182 Actinidia chinensis HOM05D000983 ORTHO05D006794 1.1e-41 174.5 224 42.4
Gohir.A03G098400 Gossypium hirsutum HOM05D000983 ORTHO05D006794 1.1e-41 174.5 232 42.7
Zm00001eb154950 Zea mays HOM05D000983 ORTHO05D006794 3.7e-40 169.5 319 34.2
HPP92_007664 Vanilla planifolia HOM05D000983 ORTHO05D006794 1.2e-38 164.5 339 35.4
Lj6C8T1 Lonicera japonica HOM05D000983 ORTHO05D006794 1.7e-29 134.0 87 77.0
SEGI_26523 Sequoiadendron giganteum HOM05D000983 ORTHO05D006794 6.3e-24 115.5 347 27.7
Glyma.18G125300 Glycine max HOM05D000983 ORTHO05D006794 2.6e-22 110.2 131 48.1
Cpa.g.sc5.271 Carica papaya HOM05D000983 ORTHO05D006794 5.0e-13 79.3 212 33.5


User provided reference genes

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