Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A725T107 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-141 505.4 258 100.0
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-67 258.1 470 41.1
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-40 169.9 601 29.1
Lj2C503T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-37 160.6 136 64.7
Lj7A368T39 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-33 146.4 261 40.6
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-30 135.2 281 34.9
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-30 134.8 338 32.8
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-23 114.4 54 92.6
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-21 107.5 98 58.2
Lj1C1169T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-20 103.6 79 70.9
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-20 103.2 261 32.6
Lj4C163G9 Lonicera japonica HOM05D000176 ORTHO05D234345 3.0e-20 103.2 79 73.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-19 100.1 124 50.0
Lju41C56T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-19 99.8 128 52.3
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-18 97.1 54 81.5
Lj2C799G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-18 95.9 125 49.6
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-17 94.7 273 31.1
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-17 94.7 75 70.7
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 4.1e-17 92.8 245 31.4
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-17 92.4 245 32.2
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 5.3e-17 92.4 54 72.2
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.1e-17 91.7 176 35.8
Lj1C694T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-16 89.4 228 31.1
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-16 89.4 288 25.0
Lj4A163G72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-15 88.2 185 38.9
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-15 88.2 117 43.6
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-15 87.8 64 57.8
Lj6C257G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-15 87.4 217 30.9
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-15 87.0 179 34.1
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-15 86.7 234 30.8
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-15 86.3 157 35.7
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-15 85.9 169 37.9
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 8.5e-15 85.1 279 28.3
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-14 84.7 86 47.7
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-14 84.3 58 62.1
Lj5A53T37 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-14 84.0 302 28.5
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-14 83.6 165 33.3
Lj1A171T31 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-14 83.2 127 42.5
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-14 83.2 140 39.3
Lj2A163T67 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-14 81.6 188 36.2
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-14 81.6 73 50.7
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-13 80.9 215 34.4
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-13 80.9 54 66.7
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-13 80.1 69 53.6
Lj4A157T27 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-13 79.7 79 54.4
Lj3A910T43 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-12 77.8 151 35.1
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-12 77.4 116 40.5
Lj8A550T28 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-12 77.4 52 67.3
Lj1C830T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-11 74.3 54 57.4
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-11 74.3 54 55.6
Lj4C452T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-11 73.6 54 63.0
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-11 73.6 148 37.8
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-11 72.8 132 37.1
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-11 72.8 133 33.1
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-11 72.4 61 54.1
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 5.7e-11 72.4 105 43.8
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 9.8e-11 71.6 67 49.3
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-10 71.2 54 55.6
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-10 70.1 57 54.4
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-10 70.1 59 52.5
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-10 69.7 61 54.1
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-10 69.3 61 50.8
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-09 67.8 91 39.6
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-09 66.6 210 27.6
Lju1074A3T39 Lonicera japonica HOM05D000176 ORTHO05D002183 3.1e-09 66.6 89 41.6
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 64.3 55 56.4
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 64.3 55 56.4
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-08 63.2 57 49.1
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-08 63.2 61 45.9
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-08 63.2 55 56.4
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-08 62.8 55 54.5
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-08 62.8 90 37.8
Lj9A187T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-08 62.8 55 54.5
Lj9A187T9 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-08 62.4 61 49.2
Lj7A349G73 Lonicera japonica HOM05D000176 ORTHO05D000106 7.7e-08 62.0 39 66.7
Lj8C419G3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-07 60.5 56 50.0
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-07 60.5 56 50.0
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-07 60.1 54 48.1
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-07 59.7 59 44.1
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.0e-07 59.3 56 48.2
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 6.5e-07 58.9 55 52.7
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 58.2 114 33.3
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 1.1e-06 58.2 38 60.5
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 58.2 45 57.8
Lj8C399G6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-06 56.6 56 48.2
Lj1A8T48 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-06 55.8 52 46.2
Lj3A82T21 Lonicera japonica HOM05D000176 ORTHO05D234538 5.5e-06 55.8 39 59.0
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-06 55.5 54 48.1
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 7.2e-06 55.5 54 48.1
Lj2C47G9 Lonicera japonica HOM05D000176 ORTHO05D235791 9.4e-06 55.1 38 68.4
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 9.4e-06 55.1 56 48.2
Lj7C228G7 Lonicera japonica HOM05D039160 ORTHO05D000106 9.4e-06 55.1 47 53.2


User provided reference genes

Program Settings