Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A690T73 Lonicera japonica HOM05D006559 ORTHO05D008867 4.1e-65 251.1 117 100.0
Cfa008663 Carpinus fangiana HOM05D006559 ORTHO05D008867 8.6e-39 163.7 95 77.9
Gohir.A09G234700 Gossypium hirsutum HOM05D006559 ORTHO05D008867 1.9e-38 162.5 94 70.2
Gorai.006G258500 Gossypium raimondii HOM05D006559 ORTHO05D008867 1.9e-38 162.5 94 70.2
Gohir.D09G235500 Gossypium hirsutum HOM05D006559 ORTHO05D008867 3.3e-38 161.8 94 70.2
Dinv44291 Davidia involucrata HOM05D006559 ORTHO05D008867 7.2e-38 160.6 94 76.6
EL10Ac3g05493 Beta vulgaris HOM05D006559 ORTHO05D008867 1.5e-35 152.9 91 73.6
CSS0039775 Camellia sinensis var. sinensis HOM05D006559 ORTHO05D008867 3.4e-35 151.8 94 73.4
Hund11970 Selenicereus undatus HOM05D006559 ORTHO05D008867 7.5e-35 150.6 91 73.6
Thecc.04G299700 Theobroma cacao HOM05D006559 ORTHO05D008867 1.3e-34 149.8 94 70.2
AUR62016199 Chenopodium quinoa HOM05D006559 ORTHO05D008867 1.7e-34 149.4 92 71.7
AUR62039288 Chenopodium quinoa HOM05D006559 ORTHO05D008867 6.3e-34 147.5 92 70.7
COL.COLO4_34624 Corchorus olitorius HOM05D006559 ORTHO05D008867 8.3e-34 147.1 95 68.4
Duzib151G0228 Durio zibethinus HOM05D006559 ORTHO05D008867 8.3e-34 147.1 94 70.2
Potri.010G144400 Populus trichocarpa HOM05D006559 ORTHO05D008867 1.8e-33 146.0 91 71.4
Sabra10G0111500 Salix brachista HOM05D006559 ORTHO05D008867 2.4e-33 145.6 91 71.4
Nn3g21720 Nelumbo nucifera HOM05D006559 ORTHO05D008867 3.1e-33 145.2 91 70.3
Hma1.2p1_0078F.1_g039970 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 9.2e-33 143.7 94 71.3
Hma1.2p1_0078F.1_g039980 Hydrangea macrophylla HOM05D006559 ORTHO05D008867 1.6e-32 142.9 92 71.7
Rhsim04G0235400 Rhododendron simsii HOM05D006559 ORTHO05D008867 1.6e-32 142.9 94 68.1
TWI73G0870 Tripterygium wilfordii HOM05D006559 ORTHO05D008867 2.0e-32 142.5 94 71.3
Sc19g0003140 Simmondsia chinensis HOM05D006559 ORTHO05D008867 2.7e-32 142.1 94 69.1
Ciclev10004497m.g Citrus clementina HOM05D006559 ORTHO05D008867 3.5e-32 141.7 91 67.0
AUR62035935 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.8e-32 140.6 92 67.4
AUR62044438 Chenopodium quinoa HOM05D006559 ORTHO05D008867 7.8e-32 140.6 92 67.4
Ah.13g071910 Amaranthus hybridus HOM05D006559 ORTHO05D008867 1.0e-31 140.2 91 71.4
Manes.03G204300 Manihot esculenta HOM05D006559 ORTHO05D008867 1.3e-31 139.8 91 67.0
Cpa.g.sc9.65 Carica papaya HOM05D006559 ORTHO05D008867 3.8e-31 138.3 95 66.3
vmacro08053 Vaccinium macrocarpon HOM05D006559 ORTHO05D008867 5.0e-31 137.9 94 68.1
Peaxi162Scf00228g00226 Petunia axillaris HOM05D006559 ORTHO05D008867 6.6e-31 137.5 91 68.1
CANSAT64G0770 Cannabis sativa HOM05D006559 ORTHO05D008867 1.5e-30 136.3 92 67.4
CAN.G244.5 Capsicum annuum HOM05D006559 ORTHO05D008867 1.9e-30 136.0 91 67.0
Nitab4.5_0011895g0010 Nicotiana tabacum HOM05D006559 ORTHO05D008867 1.9e-30 136.0 92 65.2
PGSC0003DMG400021843 Solanum tuberosum HOM05D006559 ORTHO05D008867 3.3e-30 135.2 92 65.2
MBI18_g32021_MAGBIO Magnolia biondii HOM05D006559 ORTHO05D008867 5.6e-30 134.4 91 64.8
MSTRG.3859 Avicennia marina HOM05D006559 ORTHO05D008867 7.3e-30 134.0 92 65.2
Cc03_g00890 Coffea canephora HOM05D006559 ORTHO05D008867 7.3e-30 134.0 91 70.3
Sed0004607 Sechium edule HOM05D006559 ORTHO05D008867 7.3e-30 134.0 92 66.3
arahy.Tifrunner.gnm1.ann1.Y9UCUD Arachis hypogaea HOM05D006559 ORTHO05D008867 9.5e-30 133.7 93 66.7
Lalb_Chr07g0182081 Lupinus albus HOM05D006559 ORTHO05D008867 9.5e-30 133.7 92 64.1
DCAR_002509 Daucus carota HOM05D006559 ORTHO05D008867 1.2e-29 133.3 94 66.0
CsaV3_3G015150 Cucumis sativus L. HOM05D006559 ORTHO05D008867 1.6e-29 132.9 92 64.1
Solyc01g059920.4 Solanum lycopersicum HOM05D006559 ORTHO05D008867 2.1e-29 132.5 91 63.7
MELO3C006713.2 Cucumis melo HOM05D006559 ORTHO05D008867 2.8e-29 132.1 92 65.2
Lj4g0009670 Lotus japonicus HOM05D006559 ORTHO05D008867 2.8e-29 132.1 92 66.3
Sopen01g026050 Solanum pennellii HOM05D006559 ORTHO05D008867 4.7e-29 131.3 91 62.6
Eucgr.H04041 Eucalyptus grandis HOM05D006559 ORTHO05D008867 6.1e-29 131.0 94 60.6
ECA246G2012 Erigeron canadensis HOM05D006559 ORTHO05D008867 1.0e-28 130.2 91 60.4
TPR.G5276 Trifolium pratense HOM05D006559 ORTHO05D008867 1.0e-28 130.2 92 65.2
arahy.Tifrunner.gnm1.ann1.57X5SD Arachis hypogaea HOM05D006559 ORTHO05D008867 2.3e-28 129.0 93 65.6
Ca_21444_v3 Cicer arietinum L. HOM05D006559 ORTHO05D008867 3.0e-28 128.6 92 64.1
Medtr4g122000 Medicago truncatula HOM05D006559 ORTHO05D008867 3.0e-28 128.6 92 63.0
Migut.G00055 Erythranthe guttata HOM05D006559 ORTHO05D008867 4.0e-28 128.3 92 60.9
HanXRQChr08g0236161 Helianthus annuus HOM05D006559 ORTHO05D008867 8.9e-28 127.1 91 61.5
PSO210G1317 Papaver somniferum HOM05D006559 ORTHO05D008867 1.2e-27 126.7 92 62.0
VMungo1215G0265 Vigna mungo HOM05D006559 ORTHO05D008867 1.2e-27 126.7 92 63.0
Phvul.003G113900 Phaseolus vulgaris HOM05D006559 ORTHO05D008867 4.4e-27 124.8 92 63.0
SGA_v2.0_scaffold18G08402 Striga asiatica HOM05D006559 ORTHO05D008867 4.4e-27 124.8 92 59.8
Glyma.17G033200 Glycine max HOM05D006559 ORTHO05D008867 9.8e-27 123.6 94 62.8
MD13G1155000 Malus domestica HOM05D006559 ORTHO05D008867 3.7e-26 121.7 104 54.8
Lsat_1_v5_gn_6_116281 Lactuca sativa HOM05D006559 ORTHO05D008867 4.9e-26 121.3 91 57.1
SalBow8G4902 Salvia bowleyana HOM05D006559 ORTHO05D008867 4.9e-26 121.3 93 61.3
Aqoxy2G02735 Aquilegia oxysepala HOM05D006559 ORTHO05D008867 7.0e-25 117.5 91 61.5
RcHm_v2.0_Chr4g0424901 Rosa chinensis HOM05D006559 ORTHO05D008867 1.0e-23 113.6 95 55.8
Glyma.07G240200 Glycine max HOM05D006559 ORTHO05D008867 1.3e-23 113.2 94 58.5
THA.LOC104820440 Tarenaya hassleriana HOM05D006559 ORTHO05D008867 2.3e-23 112.5 92 54.3
Psat4g024080 Pisum sativum HOM05D006559 ORTHO05D008867 3.0e-23 112.1 92 58.7
FvH4_4g19640 Fragaria vesca HOM05D006559 ORTHO05D008867 3.9e-23 111.7 92 55.4
Thhalv10020210m.g Eutrema salsugineum HOM05D006559 ORTHO05D008867 8.6e-23 110.5 102 52.0
FAN07G1421 Fragaria x ananassa HOM05D006559 ORTHO05D008867 1.1e-22 110.2 92 54.3
FAN12G1983 Fragaria x ananassa HOM05D006559 ORTHO05D008867 1.1e-22 110.2 92 54.3
AL3G30010 Arabidopsis lyrata HOM05D006559 ORTHO05D008867 1.9e-22 109.4 100 51.0
AT3G17030 Arabidopsis thaliana HOM05D006559 ORTHO05D008867 3.3e-22 108.6 97 51.5
Prupe.1G118000 Prunus persica HOM05D006559 ORTHO05D008867 3.3e-22 108.6 79 60.8
ATR0796G144 Amborella trichopoda HOM05D006559 ORTHO05D008867 4.3e-22 108.2 108 48.1
Oeu032013.1 Olea europaea HOM05D006559 ORTHO05D008867 4.3e-22 108.2 91 56.0
Carub.0003s1678 Capsella rubella HOM05D006559 ORTHO05D008867 5.6e-22 107.8 102 51.0
Sp3g15250 Schrenkiella parvula HOM05D006559 ORTHO05D008867 1.2e-21 106.7 99 51.5
Aa31LG8G4060 Aethionema arabicum HOM05D006559 ORTHO05D008867 1.8e-20 102.8 104 46.2
BcaC09g48654 Brassica carinata HOM05D006559 ORTHO05D008867 2.3e-20 102.4 99 50.5
A01p37300 Brassica napus HOM05D006559 ORTHO05D008867 2.3e-20 102.4 99 51.5
C01p47240 Brassica napus HOM05D006559 ORTHO05D008867 2.3e-20 102.4 99 50.5
BolC1t04694H Brassica oleracea HOM05D006559 ORTHO05D008867 2.3e-20 102.4 99 50.5
BraA01t03788Z Brassica rapa HOM05D006559 ORTHO05D008867 2.3e-20 102.4 99 51.5
GSVIVG01035001001 Vitis vinifera HOM05D006559 ORTHO05D008867 4.0e-20 101.7 91 56.0
unitig_32.g11851 Utricularia gibba HOM05D006559 ORTHO05D008867 2.9e-18 95.5 95 44.2
Haze_11682 Corylus avellana HOM05D006559 ORTHO05D008867 3.7e-18 95.1 81 58.0
SHI00146 Sapria himalayana HOM05D006559 ORTHO05D008867 6.4e-18 94.4 93 45.2
Zm00001eb063450 Zea mays HOM05D006559 ORTHO05D008867 1.2e-16 90.1 91 49.5
Atru.chr4.3010 Acer truncatum HOM05D006559 ORTHO05D008867 1.6e-16 89.7 68 61.8
Os03g0832500 Oryza sativa ssp. japonica HOM05D006559 ORTHO05D008867 6.0e-16 87.8 91 47.3
HPP92_015242 Vanilla planifolia HOM05D006559 ORTHO05D008867 6.0e-16 87.8 91 47.3
SEGI_33199 Sequoiadendron giganteum HOM05D006559 ORTHO05D008867 7.8e-16 87.4 94 42.6
AUR62038912 Chenopodium quinoa HOM05D006559 ORTHO05D008867 5.6e-14 81.3 81 53.1
Mapoly0086s0053 Marchantia polymorpha HOM05D006559 ORTHO05D008867 3.4e-11 72.0 101 35.6
RcHm_v2.0_Chr4g0425081 Rosa chinensis HOM05D006559 ORTHO05D008867 1.4e-09 66.6 71 46.5
TPR.G16835 Trifolium pratense HOM05D006559 ORTHO05D008867 4.6e-08 61.6 41 58.5
AagrBONN_evm.TU.Sc2ySwM_344.4908 Anthoceros agrestis HOM05D006559 ORTHO05D008867 5.1e-07 58.2 96 34.4


User provided reference genes

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