Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.7e-85 318.5 154 100.0
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.6e-56 223.0 129 78.3
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.6e-56 223.0 129 79.1
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 5.6e-54 214.5 129 74.4
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 1.2e-53 213.4 131 76.3
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.8e-53 212.2 129 72.9
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.8e-53 212.2 129 75.2
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.4e-52 209.9 135 73.3
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 2.3e-52 209.1 129 73.6
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 4.0e-52 208.4 136 70.6
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.2e-52 208.0 128 73.4
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.8e-52 207.6 128 73.4
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 8.9e-52 207.2 132 71.2
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.2e-51 206.8 129 72.9
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 1.2e-51 206.8 128 75.0
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 2.0e-51 206.1 136 67.6
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 3.4e-51 205.3 135 68.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 4.4e-51 204.9 137 68.6
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 4.4e-51 204.9 134 67.9
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 7.5e-51 204.1 134 68.7
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 7.5e-51 204.1 131 72.5
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 7.5e-51 204.1 131 72.5
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 7.5e-51 204.1 132 69.7
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 7.5e-51 204.1 140 70.0
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 7.5e-51 204.1 139 66.9
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 9.8e-51 203.8 129 72.1
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 9.8e-51 203.8 131 73.3
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.7e-50 203.0 129 71.3
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.2e-50 202.6 138 69.6
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.9e-50 202.2 132 70.5
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 4.9e-50 201.4 136 69.1
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 6.4e-50 201.1 137 67.2
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 8.3e-50 200.7 132 68.9
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.4e-49 199.9 132 67.4
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.9e-49 199.5 135 67.4
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.9e-49 199.5 135 68.1
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.4e-49 199.1 134 68.7
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 2.4e-49 199.1 140 66.4
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 5.4e-49 198.0 132 68.2
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 5.4e-49 198.0 137 67.2
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 5.4e-49 198.0 132 68.2
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 7.0e-49 197.6 136 68.4
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 9.2e-49 197.2 132 67.4
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 9.2e-49 197.2 132 65.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 1.2e-48 196.8 141 65.2
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.6e-48 196.4 134 67.9
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.6e-48 196.4 132 65.2
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 2.0e-48 196.1 141 66.7
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 2.7e-48 195.7 130 70.8
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 2.7e-48 195.7 135 68.1
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.7e-48 195.7 135 67.4
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 3.5e-48 195.3 135 65.9
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 3.5e-48 195.3 128 70.3
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 4.6e-48 194.9 141 64.5
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 6.0e-48 194.5 135 68.1
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 7.8e-48 194.1 135 68.1
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.0e-47 193.7 136 67.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.0e-47 193.7 129 68.2
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 1.3e-47 193.4 141 64.5
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 1.7e-47 193.0 130 68.5
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 2.3e-47 192.6 134 67.9
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.0e-47 192.2 131 69.5
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 3.0e-47 192.2 130 70.8
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 5.0e-47 191.4 134 64.9
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 6.6e-47 191.0 134 61.9
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.1e-46 190.3 134 67.2
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.9e-46 189.5 136 64.0
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 2.5e-46 189.1 136 64.0
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 2.5e-46 189.1 128 68.0
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 3.3e-46 188.7 126 69.8
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 4.3e-46 188.3 137 64.2
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 9.5e-46 187.2 128 64.1
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 9.5e-46 187.2 115 74.8
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.6e-45 186.4 127 64.6
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 3.6e-45 185.3 137 62.8
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 3.6e-45 185.3 137 62.8
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 3.6e-45 185.3 115 73.0
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 4.7e-45 184.9 132 60.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 6.2e-45 184.5 129 66.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 6.2e-45 184.5 130 66.9
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 6.2e-45 184.5 130 64.6
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 8.1e-45 184.1 176 52.8
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 2.3e-44 182.6 119 70.6
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 3.1e-44 182.2 126 67.5
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 3.1e-44 182.2 126 67.5
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.1e-44 182.2 132 61.4
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 4.0e-44 181.8 128 63.3
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 5.2e-44 181.4 138 59.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 1.2e-43 180.3 133 65.4
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 3.4e-43 178.7 134 64.2
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 3.4e-43 178.7 121 68.6
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 3.4e-43 178.7 121 68.6
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 3.4e-43 178.7 121 68.6
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 9.8e-43 177.2 130 63.1
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 9.8e-43 177.2 129 65.1
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 9.8e-43 177.2 126 65.1
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.3e-42 176.8 114 71.1
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 8.3e-42 174.1 135 56.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 5.6e-38 161.4 135 54.8
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 1.2e-37 160.2 128 56.2
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.6e-37 159.8 104 71.2
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.6e-37 159.8 104 71.2
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 3.6e-37 158.7 135 54.1
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 2.6e-35 152.5 138 57.2
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 2.6e-35 152.5 126 54.0
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 9.2e-33 144.1 126 53.2
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 7.8e-32 141.0 134 49.3
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 1.7e-31 139.8 139 51.1
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 3.1e-28 129.0 91 65.9
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 5.2e-28 128.3 99 56.6
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.0e-27 126.3 77 72.7
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.3e-26 123.6 121 48.8
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 6.4e-26 121.3 94 53.2
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 6.6e-23 111.3 112 53.6
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 4.3e-22 108.6 129 43.4
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 1.1e-20 104.0 65 75.4
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 5.3e-20 101.7 124 41.1
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.2e-18 96.3 109 42.2
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.9e-18 95.9 66 63.6
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 5.1e-15 85.1 112 38.4
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 3.3e-14 82.4 130 35.4
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 1.5e-11 73.6 44 72.7
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 2.1e-08 63.2 39 66.7
Hma1.2p1_1676F.1_g297010 Hydrangea macrophylla HOM05D006081 ORTHO05D007628 2.7e-08 62.8 52 51.9
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 6.0e-08 61.6 39 71.8
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.5e-06 56.2 32 75.0


User provided reference genes

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