Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 2.1e-135 485.7 253 100.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 1.8e-118 429.5 251 87.3
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 3.1e-118 428.7 253 87.7
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.9e-118 427.6 253 86.2
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 6.9e-118 427.6 253 87.0
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 6.9e-118 427.6 253 87.0
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 2.0e-117 426.0 253 87.0
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 3.4e-117 425.2 252 86.5
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 4.5e-117 424.9 253 87.0
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 4.5e-117 424.9 253 85.4
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 5.8e-117 424.5 254 86.6
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 7.6e-117 424.1 253 87.0
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 9.9e-117 423.7 253 87.0
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.7e-116 422.9 251 84.9
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 2.2e-116 422.5 250 86.0
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 1.1e-115 420.2 253 86.6
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 1.4e-115 419.9 253 86.2
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.4e-115 419.1 253 86.2
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 2.4e-115 419.1 253 83.8
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 4.2e-115 418.3 253 85.8
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 5.4e-115 417.9 253 86.2
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 5.4e-115 417.9 253 85.8
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 5.4e-115 417.9 253 85.8
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 5.4e-115 417.9 253 85.8
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 9.3e-115 417.2 253 85.4
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 1.6e-114 416.4 253 85.4
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 2.1e-114 416.0 254 85.0
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.1e-114 416.0 253 84.6
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 3.5e-114 415.2 253 84.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 4.6e-114 414.8 253 84.2
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 6.0e-114 414.5 253 84.6
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 6.0e-114 414.5 253 83.8
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 6.0e-114 414.5 253 83.0
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 7.9e-114 414.1 253 85.4
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 7.9e-114 414.1 253 85.0
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 7.9e-114 414.1 253 83.8
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 1.0e-113 413.7 260 82.7
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.0e-113 413.7 253 84.2
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.3e-113 413.3 253 86.2
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.8e-113 412.9 253 83.8
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.8e-113 412.9 253 85.8
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 82.2
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 2.3e-113 412.5 254 83.9
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 83.8
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 83.4
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 2.3e-113 412.5 253 83.8
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 5.1e-113 411.4 253 84.2
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 5.1e-113 411.4 253 85.0
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 6.7e-113 411.0 253 82.6
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 6.7e-113 411.0 253 83.8
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 81.4
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 84.2
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 85.0
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 84.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 1.5e-112 409.8 253 84.6
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.9e-112 409.5 253 82.2
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.9e-112 409.5 253 82.6
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 2.5e-112 409.1 253 84.6
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 2.5e-112 409.1 253 84.2
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 3.3e-112 408.7 253 82.2
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.3e-112 408.7 253 82.6
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 4.3e-112 408.3 257 82.5
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 5.6e-112 407.9 253 83.4
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 7.4e-112 407.5 251 84.5
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 7.4e-112 407.5 251 84.5
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 7.4e-112 407.5 253 83.8
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 7.4e-112 407.5 257 82.5
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 1.3e-111 406.8 253 81.0
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 2.1e-111 406.0 253 83.0
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.8e-111 405.6 253 83.4
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 4.8e-111 404.8 253 82.2
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 4.8e-111 404.8 253 82.6
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 6.2e-111 404.4 253 83.0
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 6.2e-111 404.4 253 83.4
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 8.1e-111 404.1 251 84.1
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 8.1e-111 404.1 253 80.2
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.0e-110 401.7 253 82.6
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 5.3e-110 401.4 253 82.6
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.0e-109 399.4 261 81.2
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 2.0e-109 399.4 282 75.9
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.4e-109 398.7 253 83.0
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 5.8e-109 397.9 284 74.6
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 7.6e-109 397.5 251 82.1
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.2e-108 396.0 253 81.4
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 2.2e-108 396.0 240 84.6
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.9e-108 395.6 284 74.3
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 7.9e-106 387.5 253 79.8
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 4.3e-104 381.7 253 79.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 1.4e-102 376.7 256 76.2
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 7.6e-101 370.9 256 75.4
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 7.1e-99 364.4 221 84.2
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.2e-98 363.6 273 74.0
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 4.6e-98 361.7 253 75.9
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 6.7e-97 357.8 253 73.9
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 4.3e-96 355.1 253 73.5
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 9.7e-96 354.0 254 71.3
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.2e-91 339.0 268 65.3
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 1.6e-90 336.7 253 72.3
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.5e-88 330.1 256 70.7
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 2.9e-84 315.8 178 91.6
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 8.5e-84 314.3 191 83.2
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.0e-81 307.4 177 87.6
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 1.8e-81 306.6 192 82.8
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 6.3e-79 298.1 275 61.8
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.4e-78 296.2 230 70.0
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 5.3e-78 295.0 178 85.4
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 2.2e-76 289.7 253 62.1
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 8.8e-73 277.7 278 55.8
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.8e-70 270.0 255 56.9
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.1e-62 244.2 146 85.6
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.2e-61 240.7 146 82.9
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 1.6e-61 240.4 253 56.5
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 7.7e-61 238.0 254 52.4
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.2e-56 224.2 254 48.8
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 2.6e-48 196.4 123 78.9
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 4.3e-35 152.5 97 77.3
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 5.6e-35 152.1 92 82.6
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 2.1e-34 150.2 86 89.5
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 5.6e-27 125.6 84 76.2
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 3.6e-18 96.3 64 73.4
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 3.5e-13 79.7 46 82.6
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 1.2e-10 71.2 49 67.3
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 8.1e-10 68.6 34 88.2


User provided reference genes

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