Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A653T76 Lonicera japonica HOM05D007412 ORTHO05D009313 2.9e-128 461.8 220 100.0
Dinv14073 Davidia involucrata HOM05D007412 ORTHO05D009313 1.2e-86 323.6 223 72.2
CSS0011967 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 7.4e-84 314.3 228 68.0
CSS0029364 Camellia sinensis var. sinensis HOM05D007412 ORTHO05D009313 7.4e-84 314.3 228 68.0
Migut.G00414 Erythranthe guttata HOM05D007412 ORTHO05D009313 1.5e-81 306.6 223 69.5
COL.COLO4_15765 Corchorus olitorius HOM05D007412 ORTHO05D009313 5.5e-79 298.1 228 64.0
Thecc.04G243600 Theobroma cacao HOM05D007412 ORTHO05D009313 1.2e-78 297.0 216 66.2
ECA240G0358 Erigeron canadensis HOM05D007412 ORTHO05D009313 1.3e-77 293.5 226 64.2
SalBow2G0207 Salvia bowleyana HOM05D007412 ORTHO05D009313 1.3e-77 293.5 220 67.3
PGSC0003DMG400006085 Solanum tuberosum HOM05D007412 ORTHO05D009313 1.8e-77 293.1 185 73.0
MSTRG.4087 Avicennia marina HOM05D007412 ORTHO05D009313 2.3e-77 292.7 217 66.8
Manes.15G035500 Manihot esculenta HOM05D007412 ORTHO05D009313 3.0e-77 292.4 213 66.2
Solyc09g083190.3 Solanum lycopersicum HOM05D007412 ORTHO05D009313 3.0e-77 292.4 184 73.4
Dinv44610 Davidia involucrata HOM05D007412 ORTHO05D009313 5.1e-77 291.6 200 72.0
Lsat_1_v5_gn_3_124261 Lactuca sativa HOM05D007412 ORTHO05D009313 8.7e-77 290.8 232 62.5
Sopen09g032110 Solanum pennellii HOM05D007412 ORTHO05D009313 1.1e-76 290.4 184 72.8
Peaxi162Scf01416g00013 Petunia axillaris HOM05D007412 ORTHO05D009313 3.3e-76 288.9 183 74.3
TAR362G0694 Trochodendron aralioides HOM05D007412 ORTHO05D009313 3.3e-76 288.9 220 65.5
CsaV3_3G012710 Cucumis sativus L. HOM05D007412 ORTHO05D009313 5.7e-76 288.1 217 65.0
Cpa.g.sc58.20 Carica papaya HOM05D007412 ORTHO05D009313 1.3e-75 287.0 213 64.8
Cc00_g20670 Coffea canephora HOM05D007412 ORTHO05D009313 1.6e-75 286.6 224 64.7
Sed0016634 Sechium edule HOM05D007412 ORTHO05D009313 1.6e-75 286.6 224 64.3
Gohir.A10G118720 Gossypium hirsutum HOM05D007412 ORTHO05D009313 4.8e-75 285.0 219 63.5
Gorai.011G164700 Gossypium raimondii HOM05D007412 ORTHO05D009313 4.8e-75 285.0 219 63.5
MD11G1069500 Malus domestica HOM05D007412 ORTHO05D009313 6.3e-75 284.6 215 63.7
Gohir.D10G147600 Gossypium hirsutum HOM05D007412 ORTHO05D009313 8.2e-75 284.3 219 63.5
Potri.010G078800 Populus trichocarpa HOM05D007412 ORTHO05D009313 8.2e-75 284.3 222 61.3
PSO210G6829 Papaver somniferum HOM05D007412 ORTHO05D009313 1.8e-74 283.1 221 63.3
PSO832G2518 Papaver somniferum HOM05D007412 ORTHO05D009313 2.4e-74 282.7 223 64.1
FAN17G1959 Fragaria x ananassa HOM05D007412 ORTHO05D009313 3.1e-74 282.3 213 63.4
Eucgr.H00220 Eucalyptus grandis HOM05D007412 ORTHO05D009313 6.9e-74 281.2 213 65.7
Rhsim04G0195000 Rhododendron simsii HOM05D007412 ORTHO05D009313 6.9e-74 281.2 228 63.6
Aqoxy5G00362 Aquilegia oxysepala HOM05D007412 ORTHO05D009313 1.2e-73 280.4 212 65.1
CANSAT78G1677 Cannabis sativa HOM05D007412 ORTHO05D009313 2.0e-73 279.6 215 61.4
FvH4_4g02220 Fragaria vesca HOM05D007412 ORTHO05D009313 4.5e-73 278.5 223 61.0
FAN12G2712 Fragaria x ananassa HOM05D007412 ORTHO05D009313 4.5e-73 278.5 223 61.0
Oeu022316.1 Olea europaea HOM05D007412 ORTHO05D009313 4.5e-73 278.5 227 63.0
Ciclev10005847m.g Citrus clementina HOM05D007412 ORTHO05D009313 7.6e-73 277.7 218 64.7
MELO3C006482.2 Cucumis melo HOM05D007412 ORTHO05D009313 7.6e-73 277.7 246 59.3
Duzib212G0542 Durio zibethinus HOM05D007412 ORTHO05D009313 7.6e-73 277.7 219 62.1
GSVIVG01018092001 Vitis vinifera HOM05D007412 ORTHO05D009313 1.7e-72 276.6 168 76.2
vmacro08398 Vaccinium macrocarpon HOM05D007412 ORTHO05D009313 6.5e-72 274.6 228 62.3
RcHm_v2.0_Chr4g0389531 Rosa chinensis HOM05D007412 ORTHO05D009313 1.4e-71 273.5 224 61.2
Sabra10G0064500 Salix brachista HOM05D007412 ORTHO05D009313 1.4e-71 273.5 222 59.0
EL10Ac6g14279 Beta vulgaris HOM05D007412 ORTHO05D009313 5.5e-71 271.6 216 62.0
HanXRQChr03g0092521 Helianthus annuus HOM05D007412 ORTHO05D009313 2.7e-70 269.2 224 60.3
Prupe.1G026900 Prunus persica HOM05D007412 ORTHO05D009313 2.7e-70 269.2 209 64.1
THA.LOC104826067 Tarenaya hassleriana HOM05D007412 ORTHO05D009313 1.3e-69 266.9 216 61.1
unitig_747.g21682 Utricularia gibba HOM05D002547 ORTHO05D009313 6.7e-69 264.6 184 69.0
PGR142G1781 Punica granatum HOM05D007412 ORTHO05D009313 1.5e-68 263.5 221 61.1
Nn1g02544 Nelumbo nucifera HOM05D007412 ORTHO05D009313 4.3e-68 261.9 221 59.7
CiPaw.01G192500 Carya illinoinensis HOM05D007412 ORTHO05D009313 2.8e-67 259.2 174 68.4
Glyma.10G000900 Glycine max HOM05D007412 ORTHO05D009313 6.3e-67 258.1 177 67.2
Haze_11268 Corylus avellana HOM05D007412 ORTHO05D009313 8.2e-67 257.7 206 61.2
Ca_12212_v3 Cicer arietinum L. HOM05D007412 ORTHO05D009313 1.8e-66 256.5 174 65.5
Lj6g0001594 Lotus japonicus HOM05D007412 ORTHO05D009313 2.4e-66 256.1 164 67.7
arahy.Tifrunner.gnm1.ann1.7ZK5QJ Arachis hypogaea HOM05D007412 ORTHO05D009313 3.1e-66 255.8 207 59.9
Medtr5g042420 Medicago truncatula HOM05D007412 ORTHO05D009313 5.3e-66 255.0 177 65.0
ATR0665G092 Amborella trichopoda HOM05D007412 ORTHO05D009313 6.9e-66 254.6 178 64.0
BraA02t07833Z Brassica rapa HOM05D007412 ORTHO05D009313 6.9e-66 254.6 226 56.2
CARHR179730 Cardamine hirsuta HOM05D007412 ORTHO05D009313 6.9e-66 254.6 222 57.2
A02p27970 Brassica napus HOM05D007412 ORTHO05D009313 1.2e-65 253.8 217 57.6
DCAR_030707 Daucus carota HOM05D007412 ORTHO05D009313 1.2e-65 253.8 225 59.6
BcaB07g30560 Brassica carinata HOM05D007412 ORTHO05D009313 1.5e-65 253.4 226 56.2
Sp2g08560 Schrenkiella parvula HOM05D007412 ORTHO05D009313 1.5e-65 253.4 225 55.1
BcaC03g16594 Brassica carinata HOM05D007412 ORTHO05D009313 3.4e-65 252.3 226 55.8
C02p44160 Brassica napus HOM05D007412 ORTHO05D009313 3.4e-65 252.3 226 55.8
BolC2t10457H Brassica oleracea HOM05D007412 ORTHO05D009313 3.4e-65 252.3 226 55.8
VMungo0720G2555 Vigna mungo HOM05D007412 ORTHO05D009313 3.4e-65 252.3 180 66.7
QL06p015027 Quercus lobata HOM05D007412 ORTHO05D009313 2.2e-64 249.6 215 59.1
AL8G16510 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 6.5e-64 248.1 218 57.3
AT5G43750 Arabidopsis thaliana HOM05D007412 ORTHO05D009313 6.5e-64 248.1 219 58.0
AL37U10020 Arabidopsis lyrata HOM05D007412 ORTHO05D009313 1.4e-63 246.9 218 56.9
arahy.Tifrunner.gnm1.ann1.VMTG6G Arachis hypogaea HOM05D007412 ORTHO05D009313 1.4e-63 246.9 209 58.4
Thhalv10003269m.g Eutrema salsugineum HOM05D007412 ORTHO05D009313 1.4e-63 246.9 226 54.0
Carub.0008s0489 Capsella rubella HOM05D007412 ORTHO05D009313 1.9e-63 246.5 216 56.5
Phvul.007G280100 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 9.4e-63 244.2 164 65.9
MBI11_g15916_MAGBIO Magnolia biondii HOM05D007412 ORTHO05D009313 7.9e-62 241.1 226 54.9
Lalb_Chr01g0020811 Lupinus albus HOM05D007412 ORTHO05D009313 1.0e-61 240.7 177 61.6
Psat6g102120 Pisum sativum HOM05D007412 ORTHO05D009313 1.8e-61 240.0 171 63.2
Os01g0929100 Oryza sativa ssp. japonica HOM05D007412 ORTHO05D009313 1.1e-60 237.3 161 68.9
CDE06G0695 Ceratophyllum demersum HOM05D007412 ORTHO05D009313 2.2e-59 233.0 174 60.9
FAN22G2201 Fragaria x ananassa HOM05D007412 ORTHO05D009313 2.4e-58 229.6 323 42.1
Zm00001eb142440 Zea mays HOM05D007412 ORTHO05D009313 2.4e-58 229.6 161 68.9
Nitab4.5_0010243g0010 Nicotiana tabacum HOM05D007412 ORTHO05D009313 9.4e-55 217.6 186 59.7
Ah.03g138430 Amaranthus hybridus HOM05D007412 ORTHO05D009313 4.7e-54 215.3 188 58.0
Glyma.19G263800 Glycine max HOM05D007412 ORTHO05D009313 2.0e-52 209.9 126 73.8
AUR62002782 Chenopodium quinoa HOM05D007412 ORTHO05D009313 8.5e-48 194.5 103 83.5
AUR62014099 Chenopodium quinoa HOM05D007412 ORTHO05D009313 3.2e-47 192.6 103 82.5
Nitab4.5_0000525g0020 Nicotiana tabacum HOM05D007412 ORTHO05D009313 3.0e-45 186.0 119 73.9
Phvul.006G006300 Phaseolus vulgaris HOM05D007412 ORTHO05D009313 2.7e-41 172.9 163 53.4
Glyma.02G000300 Glycine max HOM05D007412 ORTHO05D009313 4.5e-41 172.2 109 69.7
ClCG05G004710 Citrullus lanatus HOM05D000055 ORTHO05D000057 2.5e-39 166.4 207 47.8
SEGI_16394 Sequoiadendron giganteum HOM05D007412 ORTHO05D009313 2.5e-39 166.4 153 52.9
Actinidia40098 Actinidia chinensis HOM05D007412 ORTHO05D009313 5.4e-26 122.1 118 52.5
TPR.G4008 Trifolium pratense HOM05D007412 ORTHO05D009313 9.2e-26 121.3 100 58.0
TWI73G0547 Tripterygium wilfordii HOM05D007412 ORTHO05D009313 3.5e-25 119.4 143 46.2
Hund25023 Selenicereus undatus HOM05D007412 ORTHO05D009313 1.3e-24 117.5 77 68.8
AagrBONN_evm.TU.Sc2ySwM_228.2018 Anthoceros agrestis HOM05D007412 ORTHO05D009313 6.8e-21 105.1 133 44.4
Pp3c21_10470 Physcomitrium patens HOM05D007412 ORTHO05D009313 2.2e-19 100.1 128 40.6
SMO137G0197 Selaginella moellendorffii HOM05D007412 ORTHO05D009313 2.7e-17 93.2 131 42.7
Aa31LG2G9890 Aethionema arabicum HOM05D007412 ORTHO05D009313 1.0e-16 91.3 117 46.2
Mapoly0063s0063 Marchantia polymorpha HOM05D007412 ORTHO05D009313 1.5e-15 87.4 137 40.9
Eucgr.F02062 Eucalyptus grandis HOM05D007412 ORTHO05D009313 6.4e-11 72.0 41 70.7


User provided reference genes

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