Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A626T22 Lonicera japonica HOM05D007560 ORTHO05D005947 3.3e-152 541.6 254 100.0
Lj6C625T6 Lonicera japonica HOM05D007560 ORTHO05D005947 6.2e-135 484.2 293 81.6
Lj8C356T1 Lonicera japonica HOM05D007560 ORTHO05D005947 6.2e-119 431.0 294 74.1
Lj8P356T21 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-108 397.1 278 72.7
Lj6C390T13 Lonicera japonica HOM05D007560 ORTHO05D005947 5.9e-93 344.7 294 59.5
Lj5C336T5 Lonicera japonica HOM05D007560 ORTHO05D005947 6.3e-71 271.6 295 50.8
Lj5C338T12 Lonicera japonica HOM05D007560 ORTHO05D005947 9.4e-67 257.7 296 47.3
Lj5C336T6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.0e-65 254.2 293 48.1
Lj5C336G7 Lonicera japonica HOM05D007560 ORTHO05D005947 2.3e-65 253.1 295 48.8
Lj6A404T21 Lonicera japonica HOM05D007560 ORTHO05D005947 2.7e-53 213.0 264 48.1
Lj8C38T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.7e-47 193.7 297 42.4
Lj5C336T3 Lonicera japonica HOM05D007560 ORTHO05D005947 8.6e-36 154.8 218 42.7
Lj5C320G6 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-33 147.5 287 35.5
Lj4C614T4 Lonicera japonica HOM05D007560 ORTHO05D005947 3.1e-33 146.4 91 80.2
Lju967A0T15 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-25 121.3 145 48.3
Rhsim11G0103700 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.0e-25 119.4 289 31.1
Rhsim11G0104000 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.2e-25 119.0 289 31.1
Rhsim11G0103500 Rhododendron simsii HOM05D007560 ORTHO05D005947 1.7e-23 114.0 261 30.7
COL.COLO4_33377 Corchorus olitorius HOM05D007560 ORTHO05D005947 2.2e-23 113.6 267 28.1
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 2.2e-23 113.6 268 30.6
Lj5C321T2 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-23 113.2 300 31.7
Lj5C338T11 Lonicera japonica HOM05D007560 ORTHO05D005947 2.9e-23 113.2 194 36.6
Lj5C338T9 Lonicera japonica HOM05D007560 ORTHO05D005947 1.4e-22 110.9 204 36.3
Nitab4.5_0001058g0060 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.8e-18 95.9 257 28.8
Lj5A667T12 Lonicera japonica HOM05D007560 ORTHO05D005947 1.1e-17 94.7 145 42.8
Nitab4.5_0006682g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 2.4e-17 93.6 285 28.4
Migut.B00757 Erythranthe guttata HOM05D007560 ORTHO05D005947 4.0e-17 92.8 270 28.5
Peaxi162Scf00408g00045 Petunia axillaris HOM05D007560 ORTHO05D005947 4.0e-17 92.8 259 29.0
Peaxi162Scf00191g01113 Petunia axillaris HOM05D007560 ORTHO05D005947 6.9e-17 92.0 264 28.8
Eucgr.H04775 Eucalyptus grandis HOM05D007560 ORTHO05D005947 2.0e-16 90.5 249 27.7
Peaxi162Scf00153g00103 Petunia axillaris HOM05D007560 ORTHO05D005947 2.0e-16 90.5 267 27.7
CSS0014327 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 3.4e-16 89.7 215 31.6
Nitab4.5_0001737g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 3.4e-16 89.7 257 26.5
CSS0008734 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 4.5e-16 89.4 215 31.6
Migut.B00678 Erythranthe guttata HOM05D007560 ORTHO05D005947 4.5e-16 89.4 266 28.6
Migut.B00756 Erythranthe guttata HOM05D007560 ORTHO05D005947 4.5e-16 89.4 266 28.6
Eucgr.H04773 Eucalyptus grandis HOM05D007560 ORTHO05D005947 4.5e-16 89.4 253 27.3
Rhsim11G0104200 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.8e-16 89.0 224 29.0
PGSC0003DMG400027318 Solanum tuberosum HOM05D007560 ORTHO05D005947 7.6e-16 88.6 262 26.7
CSS0008666 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.7e-15 87.4 215 31.2
Cc02_g35550 Coffea canephora HOM05D007560 ORTHO05D005947 2.2e-15 87.0 164 32.3
PGSC0003DMG400027349 Solanum tuberosum HOM05D007560 ORTHO05D005947 2.2e-15 87.0 262 27.9
Peaxi162Scf00058g00156 Petunia axillaris HOM05D007560 ORTHO05D005947 2.9e-15 86.7 235 28.5
Aqoxy6G01701 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 4.9e-15 85.9 167 34.7
Nitab4.5_0000005g0280 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.4e-14 84.3 265 27.2
CSS0006319 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.9e-14 84.0 211 30.8
Nitab4.5_0009688g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 1.9e-14 84.0 195 28.2
Rhsim11G0091600 Rhododendron simsii HOM05D007560 ORTHO05D005947 4.2e-14 82.8 161 33.5
Rhsim11G0103400 Rhododendron simsii HOM05D007560 ORTHO05D005947 5.4e-14 82.4 161 33.5
Aqoxy5G01978 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.7e-13 80.1 153 32.0
Actinidia16920 Actinidia chinensis HOM05D007560 ORTHO05D005947 3.5e-13 79.7 173 29.5
PGSC0003DMG400039452 Solanum tuberosum HOM05D007560 ORTHO05D005947 4.6e-13 79.3 148 30.4
Dinv30955 Davidia involucrata HOM05D008691 ORTHO05D005947 7.9e-13 78.6 155 35.5
Rhsim11G0103900 Rhododendron simsii HOM05D007560 ORTHO05D005947 7.9e-13 78.6 184 31.0
CSS0006449 Camellia sinensis var. sinensis HOM05D007560 ORTHO05D005947 1.0e-12 78.2 216 30.6
Migut.K01081 Erythranthe guttata HOM05D007560 ORTHO05D005947 1.8e-12 77.4 248 23.4
Aqoxy5G01431 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 3.9e-12 76.3 161 28.6
Solyc11g007620.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 6.7e-12 75.5 173 31.2
Solyc11g007650.1 Solanum lycopersicum HOM05D007560 ORTHO05D005947 6.7e-12 75.5 173 31.2
Aqoxy7G01047 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 8.7e-12 75.1 178 28.1
Aqoxy2G00132 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.5e-11 74.3 147 32.0
Aqoxy5G04188 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 2.5e-11 73.6 158 32.3
Peaxi162Scf00598g00085 Petunia axillaris HOM05D007560 ORTHO05D005947 9.6e-11 71.6 132 34.1
Aqoxy7G01380 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.6e-10 70.9 162 27.2
PSO063G7584 Papaver somniferum HOM05D008691 ORTHO05D005947 1.6e-10 70.9 142 28.9
Duzib160G0463 Durio zibethinus HOM05D000007 ORTHO05D000017 2.8e-10 70.1 264 24.2
Oeu063628.1 Olea europaea HOM05D000007 ORTHO05D000521 6.2e-10 68.9 164 29.9
RcHm_v2.0_Chr5g0001381 Rosa chinensis HOM05D000007 ORTHO05D000017 1.1e-09 68.2 263 25.9
Aqoxy2G02111 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.4e-09 67.8 110 34.5
Nitab4.5_0001634g0020 Nicotiana tabacum HOM05D007560 ORTHO05D005947 4.0e-09 66.2 167 28.7
Oeu063630.1 Olea europaea HOM05D000007 ORTHO05D000521 5.3e-09 65.9 161 29.8
Aqoxy7G01046 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 6.9e-09 65.5 156 30.8
Oeu063631.1 Olea europaea HOM05D000007 ORTHO05D000521 6.9e-09 65.5 161 29.2
PSO421G0214 Papaver somniferum HOM05D008691 ORTHO05D005947 9.0e-09 65.1 169 29.6
Actinidia07877 Actinidia chinensis HOM05D000007 ORTHO05D000521 1.5e-08 64.3 236 26.3
Aqoxy7G01375 Aquilegia oxysepala HOM05D008691 ORTHO05D005947 1.5e-08 64.3 165 28.5
CSS0002420 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.5e-08 64.3 256 23.8
DCAR_019703 Daucus carota HOM05D000007 ORTHO05D000521 1.5e-08 64.3 167 28.7
PSO017G7158 Papaver somniferum HOM05D008691 ORTHO05D005947 1.5e-08 64.3 153 28.8
ECA234G0135 Erigeron canadensis HOM05D000007 ORTHO05D000521 2.6e-08 63.5 225 24.0
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 4.5e-08 62.8 256 23.4
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 4.5e-08 62.8 263 22.1
Migut.K01083 Erythranthe guttata HOM05D007560 ORTHO05D005947 5.8e-08 62.4 265 25.3
THA.LOC104819049 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 5.8e-08 62.4 285 23.2
Duzib133G1250 Durio zibethinus HOM05D000007 ORTHO05D000521 7.6e-08 62.0 158 29.7
Duzib211G0565 Durio zibethinus HOM05D000007 ORTHO05D000521 7.6e-08 62.0 177 26.0
Migut.K01090 Erythranthe guttata HOM05D007560 ORTHO05D005947 7.6e-08 62.0 269 24.9
COL.COLO4_31895 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.3e-07 61.2 155 26.5
Lsat_1_v5_gn_5_121721 Lactuca sativa HOM05D000007 ORTHO05D000521 2.9e-07 60.1 256 26.2
PSO339G4880 Papaver somniferum HOM05D008691 ORTHO05D005947 2.9e-07 60.1 155 27.1
Atru.chr6.3330 Acer truncatum HOM05D000007 ORTHO05D000521 3.8e-07 59.7 225 26.2
CANSAT80G1792 Cannabis sativa HOM05D000007 ORTHO05D000521 3.8e-07 59.7 128 32.8
Gorai.001G194200 Gossypium raimondii HOM05D000007 ORTHO05D000521 3.8e-07 59.7 232 24.1
Manes.12G062501 Manihot esculenta HOM05D000007 ORTHO05D000521 3.8e-07 59.7 266 26.7
ECA236G3121 Erigeron canadensis HOM05D000007 ORTHO05D000521 4.9e-07 59.3 127 32.3
Oeu046878.1 Olea europaea HOM05D000007 ORTHO05D000521 4.9e-07 59.3 163 25.8
PSO170G3231 Papaver somniferum HOM05D008691 ORTHO05D005947 4.9e-07 59.3 260 24.2
Sabra14G0124200 Salix brachista HOM05D000007 ORTHO05D000521 4.9e-07 59.3 266 27.1
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 4.9e-07 59.3 276 23.9
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 6.4e-07 58.9 226 26.1
COL.COLO4_09297 Corchorus olitorius HOM05D000007 ORTHO05D000017 6.4e-07 58.9 157 29.9
Gohir.A11G151150 Gossypium hirsutum HOM05D000007 ORTHO05D000521 6.4e-07 58.9 222 24.3
Duzib211G0499 Durio zibethinus HOM05D000007 ORTHO05D000521 8.4e-07 58.5 262 24.4
Gohir.A07G175934 Gossypium hirsutum HOM05D000007 ORTHO05D000521 8.4e-07 58.5 232 24.1
Gohir.D11G157900 Gossypium hirsutum HOM05D000007 ORTHO05D000521 8.4e-07 58.5 222 24.3
PSO447G0041 Papaver somniferum HOM05D000007 ORTHO05D000017 8.4e-07 58.5 210 25.7
Actinidia01719 Actinidia chinensis HOM05D007560 ORTHO05D005947 1.1e-06 58.2 60 51.7
COL.COLO4_19135 Corchorus olitorius HOM05D007560 ORTHO05D005947 1.1e-06 58.2 110 30.9
Lj2P928T12 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-06 58.2 152 28.3
Lj2P943T5 Lonicera japonica HOM05D000007 ORTHO05D000017 1.1e-06 58.2 152 28.3
Nn1g00748 Nelumbo nucifera HOM05D000007 ORTHO05D000017 1.1e-06 58.2 160 29.4
QL12p021856 Quercus lobata HOM05D000007 ORTHO05D000039 1.1e-06 58.2 239 23.4
Thecc.01G185200 Theobroma cacao HOM05D000007 ORTHO05D000521 1.1e-06 58.2 178 26.4
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.4e-06 57.8 236 26.7
Gohir.D11G157600 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.4e-06 57.8 181 26.0
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.4e-06 57.8 236 26.7
Gorai.007G168100 Gossypium raimondii HOM05D000007 ORTHO05D000521 1.4e-06 57.8 181 26.0
PSO782G0256 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-06 57.8 172 27.9
vmacro23187 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.4e-06 57.8 162 27.8
GSVIVG01013506001 Vitis vinifera HOM05D000007 ORTHO05D000039 1.4e-06 57.8 145 26.9
PSO170G5316 Papaver somniferum HOM05D000007 ORTHO05D000676 1.9e-06 57.4 122 28.7
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 1.9e-06 57.4 257 25.7
Gohir.D07G173800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 2.4e-06 57.0 232 23.7
Cfa000091 Carpinus fangiana HOM05D000007 ORTHO05D000017 4.2e-06 56.2 264 23.1
COL.COLO4_25856 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.2e-06 56.2 166 27.1
Lsat_1_v5_gn_7_95360 Lactuca sativa HOM05D000007 ORTHO05D000521 4.2e-06 56.2 163 27.6
Medtr5g010550 Medicago truncatula HOM05D000007 ORTHO05D000521 4.2e-06 56.2 159 24.5
CANSAT56G0084 Cannabis sativa HOM05D000007 ORTHO05D000017 5.5e-06 55.8 175 29.1
Glyma.17G008200 Glycine max HOM05D000007 ORTHO05D000017 5.5e-06 55.8 169 29.0
Aqoxy3G04127 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 7.1e-06 55.5 158 28.5
Gohir.A07G189800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 7.1e-06 55.5 157 28.7
Prupe.4G009600 Prunus persica HOM05D000007 ORTHO05D000017 7.1e-06 55.5 168 26.8
CiPaw.03G276600 Carya illinoinensis HOM05D000007 ORTHO05D000521 9.3e-06 55.1 256 25.0
Gohir.A11G151100 Gossypium hirsutum HOM05D000007 ORTHO05D000521 9.3e-06 55.1 228 22.8
Manes.13G063819 Manihot esculenta HOM05D000007 ORTHO05D000521 9.3e-06 55.1 164 26.2


User provided reference genes

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