Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 1.6e-206 722.6 381 100.0
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 8.9e-186 653.7 404 87.4
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 5.5e-111 405.2 412 57.5
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 2.2e-99 366.7 378 56.1
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 5.3e-98 362.1 399 54.4
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 1.0e-88 331.3 377 53.1
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 5.0e-88 328.9 377 52.8
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 1.9e-87 327.0 378 53.7
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 8.0e-86 321.6 372 53.8
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.4e-85 320.9 379 53.8
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 4.0e-85 319.3 407 48.9
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 6.8e-85 318.5 370 51.6
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 8.8e-85 318.2 377 53.1
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 9.8e-84 314.7 377 51.5
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 9.8e-84 314.7 372 53.0
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.8e-83 313.2 377 50.9
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 4.1e-82 309.3 370 52.7
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 9.1e-82 308.1 365 52.3
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 2.7e-81 306.6 377 49.9
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 7.7e-81 305.1 374 49.7
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.3e-80 303.5 379 52.2
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 1.1e-79 301.2 370 51.6
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 3.3e-79 299.7 372 51.3
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 5.5e-79 298.9 370 49.5
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 3.6e-78 296.2 440 44.8
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 1.0e-77 294.7 370 49.5
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 2.3e-77 293.5 376 49.5
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 6.8e-77 292.0 374 49.2
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 2.6e-76 290.0 365 47.9
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 4.4e-76 289.3 388 50.3
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 5.7e-76 288.9 376 50.5
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.3e-75 287.7 375 48.0
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 2.2e-75 287.0 373 50.7
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.2e-75 287.0 368 48.9
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.7e-75 286.2 375 46.7
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 8.3e-75 285.0 379 48.0
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.4e-74 283.5 388 49.5
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 4.1e-74 282.7 366 49.7
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.4e-74 282.3 377 48.3
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 5.4e-74 282.3 385 47.5
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 9.2e-74 281.6 377 48.3
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 2.0e-73 280.4 390 46.9
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 1.3e-72 277.7 390 46.4
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 2.3e-72 276.9 371 44.7
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 1.1e-71 274.6 366 47.5
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 9.5e-71 271.6 406 44.8
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 2.1e-70 270.4 382 46.1
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 3.6e-70 269.6 388 45.9
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 1.4e-69 267.7 383 45.7
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.8e-69 267.3 371 46.9
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 3.4e-68 263.1 370 46.2
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 1.3e-67 261.2 434 43.1
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 2.2e-67 260.4 381 44.6
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 2.2e-67 260.4 389 45.2
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.2e-67 260.4 370 45.9
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.9e-67 260.0 431 42.7
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 2.9e-67 260.0 412 42.2
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-66 258.1 426 43.7
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.4e-66 257.7 351 48.7
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 7.0e-66 255.4 373 44.0
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 1.7e-64 250.8 425 42.1
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 2.8e-62 243.4 388 44.3
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 2.3e-61 240.4 396 41.7
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.3e-61 240.4 366 45.4
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 3.4e-60 236.5 368 42.9
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 1.3e-59 234.6 421 41.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 1.7e-59 234.2 373 39.7
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.3e-56 224.6 286 51.7
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 3.0e-56 223.4 439 38.3
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 3.6e-54 216.5 403 39.7
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.8e-53 214.2 439 39.9
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 3.1e-53 213.4 286 51.0
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 1.2e-52 211.5 388 36.9
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 3.7e-51 206.5 385 35.8
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 6.4e-51 205.7 380 37.1
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 5.4e-50 202.6 377 37.4
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 1.7e-43 181.0 288 45.8
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 2.2e-43 180.6 402 33.6
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 1.2e-41 174.9 382 34.3
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 2.5e-39 167.2 420 30.0
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 3.6e-38 163.3 374 36.6
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 5.3e-37 159.5 320 39.4
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 8.7e-32 142.1 310 37.1
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 4.3e-31 139.8 127 54.3
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 3.1e-29 133.7 359 30.6
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 1.9e-23 114.4 384 26.0
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 3.3e-23 113.6 245 40.0
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.0e-20 104.4 121 51.2
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 4.9e-19 99.8 264 34.1
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.8e-16 91.3 364 28.3
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.1e-10 72.0 370 23.8
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 9.3e-10 68.9 119 37.8


User provided reference genes

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