Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 1.1e-75 286.6 142 100.0
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 1.6e-52 209.5 112 93.8
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 1.3e-44 183.3 112 82.1
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 1.8e-43 179.5 112 80.4
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 9.1e-43 177.2 112 80.4
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 1.2e-42 176.8 112 78.6
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-42 176.0 112 80.4
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 2.6e-42 175.6 112 77.7
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 4.5e-42 174.9 112 76.8
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 5.9e-42 174.5 112 79.5
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 5.9e-42 174.5 128 71.9
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 5.9e-42 174.5 112 78.6
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 7.7e-42 174.1 136 66.9
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 1.0e-41 173.7 112 79.5
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 1.3e-41 173.3 112 76.8
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 1.3e-41 173.3 112 75.9
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 2.9e-41 172.2 112 79.5
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 2.9e-41 172.2 112 78.6
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 5.0e-41 171.4 112 77.7
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 5.0e-41 171.4 111 77.5
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 5.0e-41 171.4 112 76.8
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 8.5e-41 170.6 111 78.4
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 8.5e-41 170.6 120 75.0
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 1.4e-40 169.9 136 66.2
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 1.4e-40 169.9 112 76.8
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 1.4e-40 169.9 112 75.9
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 1.9e-40 169.5 112 77.7
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 1.9e-40 169.5 112 75.9
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.5e-40 169.1 115 74.8
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.5e-40 169.1 115 74.8
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 3.2e-40 168.7 112 75.0
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 4.2e-40 168.3 112 76.8
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 4.2e-40 168.3 112 76.8
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 5.5e-40 167.9 112 75.0
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 5.5e-40 167.9 112 76.8
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 5.5e-40 167.9 112 75.9
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 7.2e-40 167.5 136 65.4
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 9.4e-40 167.2 112 76.8
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 9.4e-40 167.2 112 75.9
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 9.4e-40 167.2 112 75.9
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 9.4e-40 167.2 112 75.0
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 1.2e-39 166.8 112 75.0
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 1.2e-39 166.8 112 74.1
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 1.2e-39 166.8 112 75.0
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 1.6e-39 166.4 111 74.8
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 1.6e-39 166.4 136 64.0
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 1.6e-39 166.4 115 73.9
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 2.1e-39 166.0 111 76.6
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 2.1e-39 166.0 115 73.9
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 2.1e-39 166.0 134 64.9
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 2.7e-39 165.6 136 64.0
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 2.7e-39 165.6 112 76.8
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 2.7e-39 165.6 137 63.5
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 3.6e-39 165.2 112 74.1
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 3.6e-39 165.2 115 74.8
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 4.7e-39 164.9 136 64.7
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 4.7e-39 164.9 111 75.7
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 1.0e-38 163.7 112 74.1
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.0e-38 163.7 112 75.0
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 1.0e-38 163.7 112 74.1
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 1.4e-38 163.3 135 63.0
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 1.8e-38 162.9 115 73.9
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 2.3e-38 162.5 112 75.0
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 3.0e-38 162.2 112 72.3
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 3.9e-38 161.8 112 73.2
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 3.9e-38 161.8 112 74.1
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 5.2e-38 161.4 115 70.4
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 6.7e-38 161.0 115 70.4
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 8.8e-38 160.6 112 73.2
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 8.8e-38 160.6 109 72.5
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 8.8e-38 160.6 115 73.0
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 8.8e-38 160.6 121 69.4
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 1.5e-37 159.8 115 71.3
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 2.0e-37 159.5 112 73.2
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 2.0e-37 159.5 115 72.2
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 2.6e-37 159.1 112 72.3
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 3.3e-37 158.7 112 71.4
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 3.3e-37 158.7 112 74.1
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 4.4e-37 158.3 136 61.8
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 5.7e-37 157.9 115 71.3
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 7.4e-37 157.5 112 71.4
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 9.7e-37 157.1 112 68.8
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 9.7e-37 157.1 108 74.1
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 1.3e-36 156.8 108 75.0
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 1.7e-36 156.4 112 70.5
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 1.7e-36 156.4 112 69.6
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.7e-36 156.4 112 70.5
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 2.2e-36 156.0 109 71.6
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 4.8e-36 154.8 112 71.4
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 6.3e-36 154.5 112 71.4
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 6.3e-36 154.5 115 67.8
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 6.3e-36 154.5 115 67.8
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 8.2e-36 154.1 112 71.4
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 5.3e-35 151.4 103 74.8
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 5.3e-35 151.4 112 68.8
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 5.3e-35 151.4 76 98.7
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 7.0e-35 151.0 112 69.6
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 7.0e-35 151.0 112 67.9
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 1.6e-34 149.8 135 57.8
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 2.0e-34 149.4 112 65.2
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 2.0e-34 149.4 112 65.2
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 2.0e-34 149.4 112 65.2
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 3.5e-34 148.7 102 73.5
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 5.9e-34 147.9 112 64.3
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 1.0e-33 147.1 87 85.1
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 1.0e-33 147.1 115 64.3
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 1.0e-33 147.1 112 65.2
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 1.3e-33 146.7 112 65.2
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.3e-33 146.7 112 67.0
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 1.7e-33 146.4 112 64.3
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 2.2e-33 146.0 136 57.4
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 3.8e-33 145.2 112 65.2
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 5.0e-33 144.8 112 60.7
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 6.5e-33 144.4 102 71.6
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.9e-32 142.9 104 71.2
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 2.5e-32 142.5 112 64.3
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 2.1e-31 139.4 112 62.5
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 2.7e-31 139.0 106 69.8
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 4.7e-31 138.3 93 77.4
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 6.1e-31 137.9 112 61.6
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 2.3e-30 136.0 112 62.5
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 1.0e-25 120.6 81 77.8
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 3.6e-23 112.1 138 44.9
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 7.0e-19 97.8 87 60.9
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 9.1e-19 97.4 122 44.3
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 1.6e-18 96.7 79 62.0
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 1.2e-13 80.5 115 44.3
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 2.4e-11 72.8 73 49.3
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 4.5e-10 68.6 77 50.6


User provided reference genes

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