Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 5.8e-107 391.0 206 100.0
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 6.5e-82 307.8 190 78.9
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.4e-81 306.6 245 67.8
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 3.2e-81 305.4 245 66.5
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 3.2e-81 305.4 245 66.9
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 6.0e-80 301.2 245 65.3
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.0e-79 300.4 245 65.3
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 2.3e-79 299.3 245 64.9
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 5.1e-79 298.1 257 64.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 6.7e-79 297.7 245 64.5
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 6.7e-79 297.7 245 64.1
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 8.7e-79 297.4 245 63.3
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 1.1e-78 297.0 243 65.0
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.1e-78 297.0 243 65.8
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.3e-78 295.4 245 65.7
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 3.3e-78 295.4 249 64.7
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 3.3e-78 295.4 244 63.9
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 9.7e-78 293.9 243 63.0
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 9.7e-78 293.9 248 63.3
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 1.6e-77 293.1 248 63.3
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.6e-77 293.1 245 63.7
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 2.1e-77 292.7 249 64.3
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 4.8e-77 291.6 244 63.1
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 6.3e-77 291.2 243 64.6
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 8.2e-77 290.8 245 63.7
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 1.1e-76 290.4 247 63.2
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.4e-76 290.0 242 63.6
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.8e-76 289.7 248 62.9
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.8e-76 289.7 248 62.5
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.4e-76 289.3 245 63.3
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 2.4e-76 289.3 245 63.3
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 2.4e-76 289.3 245 63.3
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 4.1e-76 288.5 252 61.5
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 4.1e-76 288.5 242 63.6
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 4.1e-76 288.5 245 63.3
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 1.5e-75 286.6 250 61.6
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 2.6e-75 285.8 245 63.7
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 3.4e-75 285.4 245 63.7
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 3.4e-75 285.4 246 61.4
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 3.4e-75 285.4 245 62.0
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 4.5e-75 285.0 245 61.6
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 4.5e-75 285.0 247 61.1
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 4.5e-75 285.0 245 62.0
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 4.5e-75 285.0 252 61.9
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 5.9e-75 284.6 245 62.4
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 1.0e-74 283.9 245 62.0
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 1.3e-74 283.5 240 63.8
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 1.3e-74 283.5 247 61.5
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.3e-74 283.5 249 60.2
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 2.2e-74 282.7 245 61.2
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 2.2e-74 282.7 245 62.4
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 2.9e-74 282.3 243 62.6
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 5.0e-74 281.6 249 61.0
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 5.0e-74 281.6 249 61.0
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 5.0e-74 281.6 249 61.0
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 5.0e-74 281.6 245 62.0
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 6.5e-74 281.2 245 61.2
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 8.5e-74 280.8 249 61.0
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 8.5e-74 280.8 249 61.0
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 8.5e-74 280.8 245 62.0
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 8.5e-74 280.8 245 62.9
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.4e-73 280.0 245 60.8
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 5.5e-73 278.1 249 59.4
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 5.5e-73 278.1 249 59.0
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 9.3e-73 277.3 249 58.6
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 9.3e-73 277.3 244 61.1
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.2e-72 276.9 248 60.9
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.2e-72 276.9 248 60.9
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 1.2e-72 276.9 245 61.6
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 2.1e-72 276.2 249 60.2
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.1e-72 276.2 245 60.8
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 6.1e-72 274.6 249 58.2
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 2.3e-71 272.7 256 58.6
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 2.3e-71 272.7 245 59.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 6.7e-71 271.2 240 60.4
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 8.7e-71 270.8 245 58.4
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 2.2e-69 266.2 245 58.4
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 1.1e-68 263.8 245 56.7
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 1.4e-68 263.5 245 59.6
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 4.1e-68 261.9 244 57.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 6.9e-68 261.2 264 54.5
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 1.2e-67 260.4 155 79.4
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.5e-67 260.0 234 60.3
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 3.8e-66 255.4 241 56.4
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.2e-65 251.9 247 55.1
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 5.5e-65 251.5 247 55.1
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.2e-64 250.4 245 54.7
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 3.0e-63 245.7 162 72.8
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 2.6e-62 242.7 245 54.3
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 9.1e-60 234.2 160 70.6
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 1.5e-59 233.4 209 63.2
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.0e-59 233.0 203 63.5
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 4.5e-59 231.9 243 51.4
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 2.9e-58 229.2 203 63.1
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.6e-56 223.4 228 55.3
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 3.6e-56 222.2 202 60.9
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 2.6e-54 216.1 213 58.2
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 4.1e-52 208.8 184 64.1
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 8.0e-48 194.5 245 48.6
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.4e-47 193.7 241 45.6
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.8e-47 193.4 113 82.3
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.8e-47 193.4 152 61.8
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 4.0e-47 192.2 127 72.4
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-46 189.1 122 77.0
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 7.5e-46 188.0 251 42.2
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.4e-44 183.7 237 44.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 5.0e-42 175.3 114 74.6
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 8.5e-42 174.5 255 38.4
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-41 173.3 114 73.7
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 1.9e-41 173.3 114 73.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 3.2e-41 172.6 236 41.1
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.8e-36 156.8 90 86.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 1.5e-33 147.1 92 78.3
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 2.2e-29 133.3 97 66.0
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 2.4e-28 129.8 200 44.0
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 4.1e-20 102.4 71 70.4
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 7.3e-17 91.7 159 42.8
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 9.5e-17 91.3 183 34.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.9e-12 77.0 119 44.5
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 2.8e-08 63.2 39 71.8
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 8.9e-07 58.2 37 86.5


User provided reference genes

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