Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A516G44 Lonicera japonica HOM05D010180 ORTHO05D002407 4.1e-150 534.6 259 100.0
Lj6C526T4 Lonicera japonica HOM05D002342 ORTHO05D002407 5.1e-68 261.9 146 91.1
Lj6C524T10 Lonicera japonica HOM05D002180 ORTHO05D001339 7.7e-48 194.9 160 66.2
Lj6A517T27 Lonicera japonica HOM05D002342 ORTHO05D002407 1.1e-41 174.5 136 73.5
Lj6A525G37 Lonicera japonica HOM05D002342 ORTHO05D002407 7.7e-40 168.3 135 71.9
Lj6A526G34 Lonicera japonica HOM05D002342 ORTHO05D002407 1.4e-33 147.5 165 55.2
Lj6C516G5 Lonicera japonica HOM05D002342 ORTHO05D002407 9.4e-22 108.2 166 44.6
Lj1A545G61 Lonicera japonica HOM05D000764 ORTHO05D011045 4.1e-17 92.8 44 90.9
Lj6C522G10 Lonicera japonica HOM05D002342 ORTHO05D002407 4.1e-17 92.8 83 60.2
Lju2566C0G3 Lonicera japonica HOM05D001538 ORTHO05D011045 1.0e-15 88.2 46 84.8
Lj4C390T3 Lonicera japonica HOM05D010180 ORTHO05D011045 1.7e-15 87.4 44 88.6
Lj2C1217T9 Lonicera japonica HOM05D010180 ORTHO05D011045 2.3e-15 87.0 41 92.7
vmacro00455 Vaccinium macrocarpon HOM05D002342 ORTHO05D002407 3.0e-12 76.6 171 36.8
Dinv27218 Davidia involucrata HOM05D002342 ORTHO05D002407 2.0e-11 73.9 170 38.8
Haze_11629 Corylus avellana HOM05D002342 ORTHO05D002407 4.4e-11 72.8 165 37.6
Rhsim09G0058500 Rhododendron simsii HOM05D002342 ORTHO05D002407 4.4e-11 72.8 213 34.7
GSVIVG01020920001 Vitis vinifera HOM05D002342 ORTHO05D002407 5.7e-11 72.4 87 54.0
DCAR_002789 Daucus carota HOM05D002342 ORTHO05D002407 7.5e-11 72.0 168 36.9
Dinv38212 Davidia involucrata HOM05D002342 ORTHO05D002407 2.8e-10 70.1 173 35.3
CSS0000956 Camellia sinensis var. sinensis HOM05D002342 ORTHO05D002407 8.3e-10 68.6 181 34.3
Duzib212G0344 Durio zibethinus HOM05D002342 ORTHO05D002407 8.3e-10 68.6 144 36.8
Lj1A1068G46 Lonicera japonica HOM05D001538 ORTHO05D011045 1.2e-08 64.7 29 96.6
Potri.001G317200 Populus trichocarpa HOM05D002342 ORTHO05D002407 1.2e-08 64.7 108 40.7
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 3.5e-08 63.2 176 34.7
Peaxi162Scf00047g00342 Petunia axillaris HOM05D002342 ORTHO05D002407 3.5e-08 63.2 170 32.9
Lj6C526G1 Lonicera japonica HOM05D001538 ORTHO05D011045 4.5e-08 62.8 42 57.1
Actinidia23411 Actinidia chinensis HOM05D002342 ORTHO05D002407 5.9e-08 62.4 171 34.5
Hma1.2p1_0383F.1_g140550 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 5.9e-08 62.4 163 35.0
Lj1C330G10 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-07 61.2 39 61.5
Lju41C39G13 Lonicera japonica HOM05D001538 ORTHO05D011045 1.3e-07 61.2 40 60.0
Haze_11626 Corylus avellana HOM05D002342 ORTHO05D002407 1.7e-07 60.8 110 39.1
Nitab4.5_0000401g0100 Nicotiana tabacum HOM05D002342 ORTHO05D002407 1.7e-07 60.8 144 34.7
Lju760A7G21 Lonicera japonica HOM05D001538 ORTHO05D011045 3.9e-07 59.7 39 61.5
Sabra16G0200600 Salix brachista HOM05D002342 ORTHO05D002407 3.9e-07 59.7 108 39.8
Lj2A887T25 Lonicera japonica HOM05D001538 ORTHO05D000007 5.0e-07 59.3 40 57.5
Hma1.2p1_0383F.1_g140570 Hydrangea macrophylla HOM05D002342 ORTHO05D002407 6.6e-07 58.9 158 36.7
Lj6C228T14 Lonicera japonica HOM05D010180 ORTHO05D011045 6.6e-07 58.9 37 62.2
Nitab4.5_0006215g0010 Nicotiana tabacum HOM05D002342 ORTHO05D002407 6.6e-07 58.9 138 34.8
Oeu055768.2 Olea europaea HOM05D002342 ORTHO05D002407 6.6e-07 58.9 177 32.8
Actinidia38750 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.1e-06 58.2 150 34.7
ECA233G4700 Erigeron canadensis HOM05D002342 ORTHO05D002407 1.1e-06 58.2 42 69.0
Migut.N00402 Erythranthe guttata HOM05D002342 ORTHO05D002407 1.1e-06 58.2 164 31.1
Lj7C297T8 Lonicera japonica HOM05D001538 ORTHO05D004667 1.1e-06 58.2 39 61.5
ClCG05G003260 Citrullus lanatus HOM05D002342 ORTHO05D002407 1.5e-06 57.8 134 39.6
Thecc.04G199700 Theobroma cacao HOM05D002342 ORTHO05D002407 1.5e-06 57.8 70 54.3
Lj3P241T16 Lonicera japonica HOM05D010180 ORTHO05D011045 1.9e-06 57.4 204 25.5
Lj2C23T9 Lonicera japonica HOM05D001538 ORTHO05D011045 2.5e-06 57.0 37 59.5
Lj7A15G46 Lonicera japonica HOM05D000062 ORTHO05D011045 3.3e-06 56.6 39 61.5
Lj7A729G39 Lonicera japonica HOM05D010180 ORTHO05D002396 3.3e-06 56.6 204 26.5
Gohir.D02G113900 Gossypium hirsutum HOM05D002342 ORTHO05D002407 4.3e-06 56.2 87 42.5
Gorai.005G129600 Gossypium raimondii HOM05D002342 ORTHO05D002407 4.3e-06 56.2 87 42.5
Lj3P57T17 Lonicera japonica HOM05D010180 ORTHO05D011045 5.6e-06 55.8 43 58.1
TPR.G11869 Trifolium pratense HOM05D002342 ORTHO05D002407 9.5e-06 55.1 189 32.8


User provided reference genes

Program Settings