Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A504G7 Lonicera japonica HOM05D003998 ORTHO05D005144 1.1e-113 413.3 211 100.0
Lj6C491G2 Lonicera japonica HOM05D003998 ORTHO05D005144 1.7e-66 256.5 210 71.0
Lj6A454G39 Lonicera japonica HOM05D003998 ORTHO05D005144 1.3e-61 240.4 179 74.3
Lj6C507G7 Lonicera japonica HOM05D003998 ORTHO05D005144 9.0e-55 217.6 167 74.9
Lj6A518T3 Lonicera japonica HOM05D003998 ORTHO05D005144 1.8e-47 193.4 211 58.3
Atru.chr4.1608 Acer truncatum HOM05D003998 ORTHO05D005144 1.2e-46 190.7 179 57.5
Manes.15G055500 Manihot esculenta HOM05D003998 ORTHO05D005144 2.9e-45 186.0 178 56.7
GSVIVG01020986001 Vitis vinifera HOM05D003998 ORTHO05D005144 5.0e-45 185.3 175 57.1
Cfa014947 Carpinus fangiana HOM05D003998 ORTHO05D005144 1.4e-44 183.7 178 55.6
TWI53G1682 Tripterygium wilfordii HOM05D003998 ORTHO05D005144 2.5e-44 183.0 178 55.6
CSS0005254 Camellia sinensis var. sinensis HOM05D003998 ORTHO05D005144 4.2e-44 182.2 179 55.3
Actinidia35854 Actinidia chinensis HOM05D003998 ORTHO05D005144 7.1e-44 181.4 179 55.3
RcHm_v2.0_Chr4g0414141 Rosa chinensis HOM05D003998 ORTHO05D005144 7.1e-44 181.4 178 54.5
Thecc.04G198600 Theobroma cacao HOM05D003998 ORTHO05D005144 9.3e-44 181.0 182 55.5
Haze_11635 Corylus avellana HOM05D003998 ORTHO05D005144 1.2e-43 180.6 167 58.1
Sc13g0000270 Simmondsia chinensis HOM05D003998 ORTHO05D005144 1.6e-43 180.3 178 54.5
FAN22G0959 Fragaria x ananassa HOM05D003998 ORTHO05D005144 2.7e-43 179.5 178 53.9
QL06p026540 Quercus lobata HOM05D003998 ORTHO05D005144 2.7e-43 179.5 178 55.1
PSO017G6005 Papaver somniferum HOM05D003998 ORTHO05D005144 3.5e-43 179.1 179 53.6
Aqoxy2G03902 Aquilegia oxysepala HOM05D003998 ORTHO05D005144 4.6e-43 178.7 178 53.9
vmacro00453 Vaccinium macrocarpon HOM05D003998 ORTHO05D005144 6.1e-43 178.3 179 55.3
CANSAT78G0640 Cannabis sativa HOM05D003998 ORTHO05D005144 7.9e-43 177.9 182 54.9
FvH4_4g13510 Fragaria vesca HOM05D003998 ORTHO05D005144 1.3e-42 177.2 178 52.8
COL.COLO4_20194 Corchorus olitorius HOM05D003998 ORTHO05D005144 3.9e-42 175.6 178 53.9
FAN12G4114 Fragaria x ananassa HOM05D003998 ORTHO05D005144 3.9e-42 175.6 178 52.8
CiPaw.01G118500 Carya illinoinensis HOM05D003998 ORTHO05D005144 5.1e-42 175.3 167 57.5
Gorai.005G030200 Gossypium raimondii HOM05D003998 ORTHO05D005144 6.7e-42 174.9 182 53.8
PSO063G6533 Papaver somniferum HOM05D003998 ORTHO05D005144 6.7e-42 174.9 179 52.5
Rhsim09G0058600 Rhododendron simsii HOM05D003998 ORTHO05D005144 6.7e-42 174.9 194 52.6
MD04G1013700 Malus domestica HOM05D003998 ORTHO05D005144 8.7e-42 174.5 185 52.4
Ciclev10004378m.g Citrus clementina HOM05D003998 ORTHO05D005144 1.9e-41 173.3 179 53.1
Gohir.D02G024300 Gossypium hirsutum HOM05D003998 ORTHO05D005144 2.5e-41 172.9 182 53.3
Potri.001G317700 Populus trichocarpa HOM05D003998 ORTHO05D005144 3.3e-41 172.6 178 52.2
Gohir.A02G020406 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.3e-40 170.6 182 53.3
PGR083G0268 Punica granatum HOM05D003998 ORTHO05D005144 1.6e-40 170.2 178 53.4
Hund24398 Selenicereus undatus HOM05D003998 ORTHO05D005144 1.6e-40 170.2 178 53.4
DCAR_026634 Daucus carota HOM05D003998 ORTHO05D005144 2.2e-40 169.9 182 56.0
CsaV3_3G010860 Cucumis sativus L. HOM05D003998 ORTHO05D005144 6.3e-40 168.3 178 53.4
Eucgr.H02738 Eucalyptus grandis HOM05D003998 ORTHO05D005144 8.2e-40 167.9 179 50.8
Sabra16G0201000 Salix brachista HOM05D003998 ORTHO05D005144 8.2e-40 167.9 189 50.8
MELO3C006304.2 Cucumis melo HOM05D003998 ORTHO05D005144 1.1e-39 167.5 178 53.4
MBI11_g07440_MAGBIO Magnolia biondii HOM05D003998 ORTHO05D005144 5.3e-39 165.2 178 52.2
SGA_v2.0_scaffold128G34122 Striga asiatica HOM05D003998 ORTHO05D005144 1.2e-38 164.1 178 51.1
ATR0605G199 Amborella trichopoda HOM05D003998 ORTHO05D005144 2.0e-38 163.3 178 48.9
Cc03_g08110 Coffea canephora HOM05D003998 ORTHO05D005144 7.7e-38 161.4 179 50.3
Lsat_1_v5_gn_2_46500 Lactuca sativa HOM05D003998 ORTHO05D005144 7.7e-38 161.4 179 51.4
AUR62020839 Chenopodium quinoa HOM05D003998 ORTHO05D005144 1.0e-37 161.0 178 51.1
Sed0015957 Sechium edule HOM05D003998 ORTHO05D005144 1.3e-37 160.6 176 51.7
Thhalv10016302m.g Eutrema salsugineum HOM05D003998 ORTHO05D005144 1.7e-37 160.2 178 50.0
Lalb_Chr12g0205551 Lupinus albus HOM05D003998 ORTHO05D005144 1.7e-37 160.2 179 50.3
Ah.13g078040 Amaranthus hybridus HOM05D003998 ORTHO05D005144 2.9e-37 159.5 178 50.6
EL10Ac3g07474 Beta vulgaris HOM05D003998 ORTHO05D005144 2.9e-37 159.5 178 50.6
HanXRQChr15g0488261 Helianthus annuus HOM05D003998 ORTHO05D005144 2.9e-37 159.5 178 49.4
Glyma.05G153400 Glycine max HOM05D003998 ORTHO05D005144 3.8e-37 159.1 169 50.3
A05p13770 Brassica napus HOM05D003998 ORTHO05D005144 6.5e-37 158.3 178 50.0
arahy.Tifrunner.gnm1.ann1.7DTN51 Arachis hypogaea HOM05D003998 ORTHO05D005144 8.5e-37 157.9 177 49.2
AUR62018577 Chenopodium quinoa HOM05D003998 ORTHO05D005144 8.5e-37 157.9 178 50.6
THA.LOC104826185 Tarenaya hassleriana HOM05D003998 ORTHO05D005144 8.5e-37 157.9 178 48.3
Migut.N00415 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.1e-36 157.5 178 48.9
Carub.0004s1305 Capsella rubella HOM05D003998 ORTHO05D005144 1.4e-36 157.1 178 49.4
Aa31LG5G5250 Aethionema arabicum HOM05D003998 ORTHO05D005144 1.9e-36 156.8 192 47.4
BraA05t20313Z Brassica rapa HOM05D003998 ORTHO05D005144 1.9e-36 156.8 178 50.0
Phvul.003G050000 Phaseolus vulgaris HOM05D003998 ORTHO05D005144 2.5e-36 156.4 169 49.7
C04p18040 Brassica napus HOM05D003998 ORTHO05D005144 3.2e-36 156.0 178 50.0
BolC4t23351H Brassica oleracea HOM05D003998 ORTHO05D005144 3.2e-36 156.0 178 50.0
Glyma.08G111100 Glycine max HOM05D003998 ORTHO05D005144 5.5e-36 155.2 169 49.7
Sp4g14180 Schrenkiella parvula HOM05D003998 ORTHO05D005144 7.2e-36 154.8 178 48.9
AL4G27000 Arabidopsis lyrata HOM05D003998 ORTHO05D005144 9.4e-36 154.5 178 47.8
AT2G31740 Arabidopsis thaliana HOM05D003998 ORTHO05D005144 9.4e-36 154.5 178 47.2
Psat7g074560 Pisum sativum HOM05D003998 ORTHO05D005144 9.4e-36 154.5 168 49.4
Ca_17974_v3 Cicer arietinum L. HOM05D003998 ORTHO05D005144 1.6e-35 153.7 169 50.3
MD01G1010300 Malus domestica HOM05D003998 ORTHO05D005144 4.6e-35 152.1 167 51.5
Lj4g0023654 Lotus japonicus HOM05D003998 ORTHO05D005144 6.1e-35 151.8 171 47.4
Medtr8g085220 Medicago truncatula HOM05D003998 ORTHO05D005144 1.4e-34 150.6 170 48.2
CARHR125430 Cardamine hirsuta HOM05D003998 ORTHO05D005144 2.3e-34 149.8 177 47.5
PGSC0003DMG400026420 Solanum tuberosum HOM05D003998 ORTHO05D005144 3.0e-34 149.4 178 47.2
SalBow3G3008 Salvia bowleyana HOM05D003998 ORTHO05D005144 3.9e-34 149.1 178 47.2
Solyc09g092140.3 Solanum lycopersicum HOM05D003998 ORTHO05D005144 5.1e-34 148.7 178 46.6
VMungo0251G3649 Vigna mungo HOM05D003998 ORTHO05D005144 5.1e-34 148.7 169 48.5
MSTRG.21978 Avicennia marina HOM05D003998 ORTHO05D005144 1.1e-33 147.5 178 48.3
Peaxi162Scf00047g00340 Petunia axillaris HOM05D003998 ORTHO05D005144 1.1e-33 147.5 192 44.8
Sopen09g035020 Solanum pennellii HOM05D003998 ORTHO05D005144 2.5e-33 146.4 178 46.1
CAN.G1648.3 Capsicum annuum HOM05D003998 ORTHO05D005144 3.3e-33 146.0 178 46.6
Lj6A498G14 Lonicera japonica HOM05D003998 ORTHO05D005144 1.7e-32 143.7 94 81.9
Dinv38203 Davidia involucrata HOM05D003998 ORTHO05D005144 1.4e-31 140.6 140 55.7
Os04g0379300 Oryza sativa ssp. japonica HOM05D003998 ORTHO05D005144 1.4e-31 140.6 175 46.9
SHI00910 Sapria himalayana HOM05D003998 ORTHO05D005144 6.9e-31 138.3 178 44.4
arahy.Tifrunner.gnm1.ann1.DT4C3Q Arachis hypogaea HOM05D003998 ORTHO05D005144 1.5e-30 137.1 185 44.9
Zm00001eb420660 Zea mays HOM05D003998 ORTHO05D005144 1.5e-30 137.1 175 46.3
Lj6A500G11 Lonicera japonica HOM05D003998 ORTHO05D005144 7.7e-30 134.8 72 94.4
ECA232G0954 Erigeron canadensis HOM05D003998 ORTHO05D005144 6.5e-29 131.7 178 43.8
BcaB02g10415 Brassica carinata HOM05D003998 ORTHO05D005144 8.5e-29 131.3 178 44.4
SEGI_17124 Sequoiadendron giganteum HOM05D003998 ORTHO05D005144 8.5e-29 131.3 181 42.0
TPR.G11885 Trifolium pratense HOM05D003998 ORTHO05D005144 8.5e-29 131.3 171 43.9
unitig_22.g6826 Utricularia gibba HOM05D003998 ORTHO05D005144 2.5e-28 129.8 178 41.6
Migut.N00410 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.4e-28 127.9 178 41.6
Migut.N00411 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.1e-27 126.7 175 42.9
Migut.I00213 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.6e-27 125.9 181 42.5
Migut.N00413 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.6e-27 125.9 175 41.7
Lj6A508G27 Lonicera japonica HOM05D003998 ORTHO05D005144 4.7e-27 125.6 121 62.8
TAR362G0495 Trochodendron aralioides HOM05D003998 ORTHO05D005144 1.8e-26 123.6 142 49.3
Lj6A496T18 Lonicera japonica HOM05D003998 ORTHO05D005144 2.3e-26 123.2 81 82.7
Nitab4.5_0000401g0150 Nicotiana tabacum HOM05D003998 ORTHO05D005144 3.0e-26 122.9 178 42.1
Lj6A449T9 Lonicera japonica HOM05D003998 ORTHO05D005144 2.0e-25 120.2 72 86.1
Migut.N00409 Erythranthe guttata HOM05D003998 ORTHO05D005144 5.7e-25 118.6 178 41.6
Migut.B00567 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.7e-25 117.9 178 37.6
Migut.N00412 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.7e-25 117.9 170 41.2
Migut.I00433 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.7e-24 117.1 178 41.0
Prupe.1G159800 Prunus persica HOM05D003998 ORTHO05D005144 8.2e-24 114.8 161 42.9
Migut.F01532 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.1e-23 114.4 179 39.1
Nitab4.5_0004231g0010 Nicotiana tabacum HOM05D003998 ORTHO05D005144 1.8e-23 113.6 178 41.0
Prupe.1G159900 Prunus persica HOM05D003998 ORTHO05D005144 4.1e-23 112.5 156 43.6
ClCG05G003230 Citrullus lanatus HOM05D003998 ORTHO05D005144 5.9e-22 108.6 136 45.6
Migut.I00431 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.0e-21 107.8 168 39.3
Migut.F01777 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.9e-21 106.3 177 40.1
Migut.F01720 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.2e-20 102.8 167 39.5
Migut.H01109 Erythranthe guttata HOM05D003998 ORTHO05D005144 4.2e-20 102.4 177 39.0
Migut.F01776 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.7e-19 99.8 184 39.1
Migut.N00888 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.0e-18 97.8 200 31.5
Nn1g07941 Nelumbo nucifera HOM05D003998 ORTHO05D005144 6.7e-18 95.1 68 69.1
Cpa.g.sc83.23 Carica papaya HOM05D003998 ORTHO05D005144 8.8e-18 94.7 65 69.2
Migut.N00408 Erythranthe guttata HOM05D003998 ORTHO05D005144 5.7e-17 92.0 182 37.4
Lj6A453G8 Lonicera japonica HOM05D003998 ORTHO05D005144 2.2e-16 90.1 204 37.7
Migut.I00434 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.1e-15 87.8 178 35.4
Nn1g07939 Nelumbo nucifera HOM05D003998 ORTHO05D005144 1.8e-15 87.0 83 51.8
Migut.O00105 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.1e-15 84.7 159 38.4
Lj6A495G25 Lonicera japonica HOM05D003998 ORTHO05D021041 5.0e-13 79.0 160 37.5
Duzib151G0324 Durio zibethinus HOM05D003998 ORTHO05D005144 2.5e-12 76.6 178 32.0
MD04G1013600 Malus domestica HOM05D003998 ORTHO05D005144 9.4e-12 74.7 67 55.2
Pp3c8_4600 Physcomitrium patens HOM05D003998 ORTHO05D005144 1.8e-10 70.5 160 33.1
Migut.I00432 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.0e-09 67.0 76 46.1
Mapoly0151s0004 Marchantia polymorpha HOM05D003998 ORTHO05D005144 2.6e-09 66.6 153 32.7
Migut.H01297 Erythranthe guttata HOM05D000247 ORTHO05D003114 4.4e-09 65.9 170 32.9
Migut.C00311 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.8e-09 64.7 161 28.6
CBR_g32089 Chara braunii HOM05D003998 ORTHO05D005144 6.3e-08 62.0 161 33.5
Pp3c17_2650 Physcomitrium patens HOM05D003998 ORTHO05D005144 1.1e-07 61.2 143 32.9
Migut.O00104 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.8e-07 60.5 174 26.4
Oeu025025.1 Olea europaea HOM05D003998 ORTHO05D005144 9.1e-07 58.2 105 34.3


User provided reference genes

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