Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj6A453G8 Lonicera japonica HOM05D003998 ORTHO05D005144 1.4e-84 316.2 158 100.0
Lj6A495G25 Lonicera japonica HOM05D003998 ORTHO05D021041 2.6e-62 242.3 133 91.0
Lj6C491G2 Lonicera japonica HOM05D003998 ORTHO05D005144 1.3e-50 203.4 315 44.1
Lj6A454G39 Lonicera japonica HOM05D003998 ORTHO05D005144 3.8e-42 175.3 297 41.1
Lj6A518T3 Lonicera japonica HOM05D003998 ORTHO05D005144 8.5e-42 174.1 183 57.9
Lj6C507G7 Lonicera japonica HOM05D003998 ORTHO05D005144 3.0e-39 165.6 290 41.0
Lj6A498G14 Lonicera japonica HOM05D003998 ORTHO05D005144 1.6e-35 153.3 150 59.3
Duzib151G0324 Durio zibethinus HOM05D003998 ORTHO05D005144 3.8e-34 148.7 214 43.0
MD01G1010300 Malus domestica HOM05D003998 ORTHO05D005144 2.2e-29 132.9 271 34.3
DCAR_026634 Daucus carota HOM05D003998 ORTHO05D005144 4.1e-28 128.6 296 33.4
Actinidia35854 Actinidia chinensis HOM05D003998 ORTHO05D005144 5.9e-27 124.8 297 33.0
vmacro00453 Vaccinium macrocarpon HOM05D003998 ORTHO05D005144 1.0e-26 124.0 297 32.7
Haze_11635 Corylus avellana HOM05D003998 ORTHO05D005144 1.7e-26 123.2 265 32.8
MD04G1013700 Malus domestica HOM05D003998 ORTHO05D005144 5.0e-26 121.7 297 31.0
Atru.chr4.1608 Acer truncatum HOM05D003998 ORTHO05D005144 1.9e-25 119.8 297 31.3
CSS0005254 Camellia sinensis var. sinensis HOM05D003998 ORTHO05D005144 3.3e-25 119.0 297 32.0
Lsat_1_v5_gn_2_46500 Lactuca sativa HOM05D003998 ORTHO05D005144 7.3e-25 117.9 308 31.2
CANSAT78G0640 Cannabis sativa HOM05D003998 ORTHO05D005144 1.6e-24 116.7 297 31.3
Potri.001G317700 Populus trichocarpa HOM05D003998 ORTHO05D005144 1.6e-24 116.7 293 30.7
Ciclev10004378m.g Citrus clementina HOM05D003998 ORTHO05D005144 3.6e-24 115.5 297 30.0
ECA232G0954 Erigeron canadensis HOM05D003998 ORTHO05D005144 3.6e-24 115.5 266 32.3
PSO017G6005 Papaver somniferum HOM05D003998 ORTHO05D005144 8.0e-24 114.4 295 29.8
Cfa014947 Carpinus fangiana HOM05D003998 ORTHO05D005144 1.4e-23 113.6 294 29.9
PSO063G6533 Papaver somniferum HOM05D003998 ORTHO05D005144 1.4e-23 113.6 295 29.5
RcHm_v2.0_Chr4g0414141 Rosa chinensis HOM05D003998 ORTHO05D005144 2.3e-23 112.8 297 30.0
Gohir.A02G020406 Gossypium hirsutum HOM05D003998 ORTHO05D005144 3.1e-23 112.5 297 31.3
FAN22G0959 Fragaria x ananassa HOM05D003998 ORTHO05D005144 4.0e-23 112.1 295 29.8
Gorai.005G030200 Gossypium raimondii HOM05D003998 ORTHO05D005144 4.0e-23 112.1 297 31.3
FvH4_4g13510 Fragaria vesca HOM05D003998 ORTHO05D005144 5.2e-23 111.7 295 29.8
FAN12G4114 Fragaria x ananassa HOM05D003998 ORTHO05D005144 5.2e-23 111.7 295 29.8
Gohir.D02G024300 Gossypium hirsutum HOM05D003998 ORTHO05D005144 5.2e-23 111.7 297 31.0
MBI11_g07440_MAGBIO Magnolia biondii HOM05D003998 ORTHO05D005144 5.2e-23 111.7 297 30.0
Rhsim09G0058600 Rhododendron simsii HOM05D003998 ORTHO05D005144 6.8e-23 111.3 333 30.3
Aqoxy2G03902 Aquilegia oxysepala HOM05D003998 ORTHO05D005144 8.9e-23 110.9 297 29.6
TWI53G1682 Tripterygium wilfordii HOM05D003998 ORTHO05D005144 1.2e-22 110.5 297 31.0
GSVIVG01020986001 Vitis vinifera HOM05D003998 ORTHO05D005144 1.2e-22 110.5 247 33.2
CiPaw.01G118500 Carya illinoinensis HOM05D003998 ORTHO05D005144 1.5e-22 110.2 292 30.1
Glyma.08G111100 Glycine max HOM05D003998 ORTHO05D005144 3.4e-22 109.0 289 29.1
Sabra16G0201000 Salix brachista HOM05D003998 ORTHO05D005144 5.8e-22 108.2 289 29.8
Sc13g0000270 Simmondsia chinensis HOM05D003998 ORTHO05D005144 5.8e-22 108.2 295 29.8
Glyma.05G153400 Glycine max HOM05D003998 ORTHO05D005144 9.8e-22 107.5 291 29.2
QL06p026540 Quercus lobata HOM05D003998 ORTHO05D005144 1.7e-21 106.7 289 30.8
Thecc.04G198600 Theobroma cacao HOM05D003998 ORTHO05D005144 1.7e-21 106.7 297 30.6
Lj4g0023654 Lotus japonicus HOM05D003998 ORTHO05D005144 2.2e-21 106.3 293 28.7
Dinv38203 Davidia involucrata HOM05D003998 ORTHO05D005144 2.9e-21 105.9 185 38.9
Lalb_Chr12g0205551 Lupinus albus HOM05D003998 ORTHO05D005144 2.9e-21 105.9 289 30.8
COL.COLO4_20194 Corchorus olitorius HOM05D003998 ORTHO05D005144 4.9e-21 105.1 297 30.3
Manes.15G055500 Manihot esculenta HOM05D003998 ORTHO05D005144 4.9e-21 105.1 293 30.4
Cc03_g08110 Coffea canephora HOM05D003998 ORTHO05D005144 6.4e-21 104.8 295 29.5
Sed0015957 Sechium edule HOM05D003998 ORTHO05D005144 6.4e-21 104.8 293 29.7
Nitab4.5_0004231g0010 Nicotiana tabacum HOM05D003998 ORTHO05D005144 1.9e-20 103.2 286 29.0
MELO3C006304.2 Cucumis melo HOM05D003998 ORTHO05D005144 9.2e-20 100.9 293 29.4
Ca_17974_v3 Cicer arietinum L. HOM05D003998 ORTHO05D005144 1.2e-19 100.5 291 29.2
CsaV3_3G010860 Cucumis sativus L. HOM05D003998 ORTHO05D005144 1.2e-19 100.5 293 29.4
Psat7g074560 Pisum sativum HOM05D003998 ORTHO05D005144 2.0e-19 99.8 291 28.9
THA.LOC104826185 Tarenaya hassleriana HOM05D003998 ORTHO05D005144 2.7e-19 99.4 293 28.7
AUR62018577 Chenopodium quinoa HOM05D003998 ORTHO05D005144 4.6e-19 98.6 292 29.5
Prupe.1G159900 Prunus persica HOM05D003998 ORTHO05D005144 4.6e-19 98.6 179 35.2
Solyc09g092140.3 Solanum lycopersicum HOM05D003998 ORTHO05D005144 4.6e-19 98.6 297 27.6
Sopen09g035020 Solanum pennellii HOM05D003998 ORTHO05D005144 4.6e-19 98.6 297 27.6
PGSC0003DMG400026420 Solanum tuberosum HOM05D003998 ORTHO05D005144 4.6e-19 98.6 297 27.6
TAR362G0495 Trochodendron aralioides HOM05D003998 ORTHO05D005144 6.0e-19 98.2 211 35.1
Lj6A500T11 Lonicera japonica HOM05D003998 ORTHO05D005144 7.8e-19 97.8 47 97.9
EL10Ac3g07474 Beta vulgaris HOM05D003998 ORTHO05D005144 1.0e-18 97.4 297 28.6
arahy.Tifrunner.gnm1.ann1.DT4C3Q Arachis hypogaea HOM05D003998 ORTHO05D005144 1.7e-18 96.7 304 28.3
SGA_v2.0_scaffold128G34122 Striga asiatica HOM05D003998 ORTHO05D005144 1.7e-18 96.7 298 28.2
Nitab4.5_0000401g0150 Nicotiana tabacum HOM05D003998 ORTHO05D005144 3.9e-18 95.5 298 27.5
AUR62020839 Chenopodium quinoa HOM05D003998 ORTHO05D005144 5.0e-18 95.1 292 29.1
arahy.Tifrunner.gnm1.ann1.7DTN51 Arachis hypogaea HOM05D003998 ORTHO05D005144 6.6e-18 94.7 303 28.1
CAN.G1648.3 Capsicum annuum HOM05D003998 ORTHO05D005144 1.1e-17 94.0 297 26.9
Lj6A449T10 Lonicera japonica HOM05D003998 ORTHO05D005144 1.1e-17 94.0 47 93.6
Medtr8g085220 Medicago truncatula HOM05D003998 ORTHO05D005144 1.1e-17 94.0 291 28.5
Phvul.003G050000 Phaseolus vulgaris HOM05D003998 ORTHO05D005144 1.5e-17 93.6 291 27.1
ATR0605G199 Amborella trichopoda HOM05D003998 ORTHO05D005144 1.9e-17 93.2 295 27.5
Lj6A492T19 Lonicera japonica HOM05D003998 ORTHO05D005144 2.5e-17 92.8 47 93.6
PGR083G0268 Punica granatum HOM05D003998 ORTHO05D005144 2.5e-17 92.8 297 26.3
MSTRG.21978 Avicennia marina HOM05D003998 ORTHO05D005144 4.3e-17 92.0 298 28.5
HanXRQChr15g0488261 Helianthus annuus HOM05D003998 ORTHO05D005144 4.3e-17 92.0 176 36.9
Thhalv10016302m.g Eutrema salsugineum HOM05D003998 ORTHO05D005144 7.3e-17 91.3 289 27.3
Lj6A504G7 Lonicera japonica HOM05D003998 ORTHO05D005144 9.5e-17 90.9 204 37.7
Lj6A502T9 Lonicera japonica HOM05D003998 ORTHO05D005144 1.6e-16 90.1 47 89.4
Ah.13g078040 Amaranthus hybridus HOM05D003998 ORTHO05D005144 2.1e-16 89.7 291 27.1
C04p18040 Brassica napus HOM05D003998 ORTHO05D005144 2.8e-16 89.4 286 27.3
BolC4t23351H Brassica oleracea HOM05D003998 ORTHO05D005144 2.8e-16 89.4 286 27.3
BraA05t20313Z Brassica rapa HOM05D003998 ORTHO05D005144 2.8e-16 89.4 286 27.6
A05p13770 Brassica napus HOM05D003998 ORTHO05D005144 3.6e-16 89.0 286 27.3
unitig_22.g6826 Utricularia gibba HOM05D003998 ORTHO05D005144 3.6e-16 89.0 298 26.5
Carub.0004s1305 Capsella rubella HOM05D003998 ORTHO05D005144 4.7e-16 88.6 286 26.9
Eucgr.H02738 Eucalyptus grandis HOM05D003998 ORTHO05D005144 4.7e-16 88.6 294 27.2
Os04g0379300 Oryza sativa ssp. japonica HOM05D003998 ORTHO05D005144 4.7e-16 88.6 296 25.0
Aa31LG5G5250 Aethionema arabicum HOM05D003998 ORTHO05D005144 6.2e-16 88.2 296 27.4
AL4G27000 Arabidopsis lyrata HOM05D003998 ORTHO05D005144 6.2e-16 88.2 289 27.0
VMungo0251G3649 Vigna mungo HOM05D003998 ORTHO05D005144 6.2e-16 88.2 291 26.8
Peaxi162Scf00047g00340 Petunia axillaris HOM05D003998 ORTHO05D005144 3.1e-15 85.9 321 24.9
BcaB02g10415 Brassica carinata HOM05D003998 ORTHO05D005144 5.2e-15 85.1 268 27.2
AT2G31740 Arabidopsis thaliana HOM05D003998 ORTHO05D005144 6.8e-15 84.7 289 26.6
Lj6A449T9 Lonicera japonica HOM05D003998 ORTHO05D005144 6.8e-15 84.7 88 56.8
TPR.G11885 Trifolium pratense HOM05D003998 ORTHO05D005144 8.9e-15 84.3 291 27.5
Zm00001eb420660 Zea mays HOM05D003998 ORTHO05D005144 8.9e-15 84.3 296 25.3
Lj6A500G11 Lonicera japonica HOM05D003998 ORTHO05D005144 1.2e-14 84.0 88 55.7
Sp4g14180 Schrenkiella parvula HOM05D003998 ORTHO05D005144 1.2e-14 84.0 289 26.3
ClCG05G003230 Citrullus lanatus HOM05D003998 ORTHO05D005144 1.5e-14 83.6 207 31.4
Nn1g07939 Nelumbo nucifera HOM05D003998 ORTHO05D005144 2.6e-14 82.8 180 34.4
Lj6A508G27 Lonicera japonica HOM05D003998 ORTHO05D005144 4.9e-13 78.6 86 54.7
CARHR125430 Cardamine hirsuta HOM05D003998 ORTHO05D005144 6.4e-13 78.2 289 25.3
Hund24398 Selenicereus undatus HOM05D003998 ORTHO05D005144 5.4e-12 75.1 272 26.1
Migut.N00415 Erythranthe guttata HOM05D003998 ORTHO05D005144 6.0e-11 71.6 105 42.9
SEGI_17124 Sequoiadendron giganteum HOM05D003998 ORTHO05D005144 3.0e-10 69.3 218 27.1
SHI00910 Sapria himalayana HOM05D003998 ORTHO05D005144 1.1e-09 67.4 287 25.4
Nn1g07941 Nelumbo nucifera HOM05D003998 ORTHO05D005144 2.5e-09 66.2 42 69.0
SalBow3G3008 Salvia bowleyana HOM05D003998 ORTHO05D005144 4.3e-09 65.5 120 33.3
Cpa.g.sc83.23 Carica papaya HOM05D003998 ORTHO05D005144 5.6e-09 65.1 42 64.3
Migut.N00411 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.1e-08 63.2 81 44.4
Migut.N00413 Erythranthe guttata HOM05D003998 ORTHO05D005144 8.1e-08 61.2 81 43.2
Migut.N00412 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.4e-07 60.5 42 61.9
HPP92_024546 Vanilla planifolia HOM05D003998 ORTHO05D005144 1.4e-07 60.5 109 36.7
HPP92_024545 Vanilla planifolia HOM05D003998 ORTHO05D005144 2.3e-07 59.7 53 49.1
Migut.N00409 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.1e-07 59.3 109 36.7
Migut.I00433 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.2e-06 57.4 41 61.0


User provided reference genes

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